Strain Fitness in Pantoea sp. MT58 around IAI47_09530

Experiment: Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50
2,012,994	+		IAI47_09525	0.13	-0.7
2,013,009	-		IAI47_09525	0.15	+0.5
2,013,118	+		IAI47_09525	0.29	+0.7
2,013,126	-		IAI47_09525	0.30	+0.5
2,013,164	+		IAI47_09525	0.34	-1.1
2,013,164	+		IAI47_09525	0.34	+0.5
2,013,165	-		IAI47_09525	0.34	+0.9
2,013,252	+		IAI47_09525	0.45	-0.8
2,013,252	+		IAI47_09525	0.45	+0.5
2,013,252	+		IAI47_09525	0.45	+0.8
2,013,253	-		IAI47_09525	0.45	-0.4
2,013,253	-		IAI47_09525	0.45	+0.5
2,013,255	+		IAI47_09525	0.46	-1.8
2,013,256	-		IAI47_09525	0.46	+0.6
2,013,256	-		IAI47_09525	0.46	-0.4
2,013,256	-		IAI47_09525	0.46	+1.3
2,013,274	+		IAI47_09525	0.48	-1.7
2,013,275	-		IAI47_09525	0.48	+0.7
2,013,275	-		IAI47_09525	0.48	+0.8
2,013,359	+		IAI47_09525	0.58	-1.7
2,013,360	-		IAI47_09525	0.59	+0.7
2,013,360	-		IAI47_09525	0.59	+1.3
2,013,360	-		IAI47_09525	0.59	+1.1
2,013,360	-		IAI47_09525	0.59	-0.6
2,013,495	-		IAI47_09525	0.75	-1.1
2,013,503	+		IAI47_09525	0.76	+1.3
2,013,503	+		IAI47_09525	0.76	-0.7
2,013,551	+		IAI47_09525	0.82	+0.2
2,013,552	-		IAI47_09525	0.82	+0.2
2,013,552	-		IAI47_09525	0.82	-0.5
2,013,552	-		IAI47_09525	0.82	-0.5
2,013,599	+		IAI47_09525	0.88	+0.1
2,013,599	+		IAI47_09525	0.88	-1.4
2,013,599	+		IAI47_09525	0.88	-1.2
2,013,599	+		IAI47_09525	0.88	+1.8
2,013,600	-		IAI47_09525	0.88	-2.3
2,013,614	+		IAI47_09525	0.90	+0.5
2,013,675	+				-0.8
2,013,683	+				+0.4
2,013,695	+				-0.2
2,013,696	-				-0.4
2,013,727	+				-1.3
2,013,727	+				-0.6
2,013,727	+				-0.2
2,013,733	+				-1.5
2,013,733	+				-2.0
2,013,733	+				+1.4
2,013,736	+				+0.4
2,013,736	+				+0.6
2,013,736	+				-1.1
2,013,736	+				+1.5
2,013,736	+				-1.4
2,013,737	-				-2.0
2,013,740	+				+0.8
2,013,740	+				-0.5
2,013,740	+				-1.5
2,013,741	-				+0.6
2,013,741	-				-1.6
2,013,741	-				+0.4
2,013,741	-				+0.8
2,013,741	-				+0.5
2,013,741	-				+0.3
2,013,741	-				+0.7
2,013,744	+				+0.7
2,013,744	+				+0.8
2,013,744	+				+3.2
2,013,749	+				-1.2
2,013,749	+				+0.8
2,013,750	-				+1.1
2,013,753	+				+0.9
2,013,753	+				+0.4
2,013,753	+				-1.1
2,013,753	+				-1.5
2,013,754	-				+1.0
2,013,754	-				-0.2
2,013,754	-				-0.7
2,013,754	-				-0.1
2,013,754	-				+1.3
2,013,755	+				-0.4
2,013,756	-				+0.5
2,013,792	-				-1.5
2,013,804	-				-1.6
2,013,804	-				+0.8
2,013,816	+				+0.2
2,013,852	+				-0.8
2,013,852	+				+1.1
2,013,852	+				-1.2
2,013,853	-				-1.5
2,013,864	+				-0.5
2,013,889	+				+1.1
2,013,889	+				+0.2
2,013,890	-				-0.4
2,013,890	-				-1.3
2,013,956	-				+1.3
2,013,956	-				+0.3
2,013,993	-				-0.4
2,014,038	+				+0.0
2,014,039	-				+1.2
2,014,068	+		IAI47_09530	0.15	+0.9
2,014,068	+		IAI47_09530	0.15	-1.6
2,014,069	-		IAI47_09530	0.15	+2.4
2,014,069	-		IAI47_09530	0.15	+0.8
2,014,072	+		IAI47_09530	0.15	-1.9
2,014,125	+		IAI47_09530	0.25	-0.1
2,014,126	-		IAI47_09530	0.25	-1.7
2,014,152	+		IAI47_09530	0.30	-1.9
2,014,266	+		IAI47_09530	0.52	+1.7
2,014,266	+		IAI47_09530	0.52	-0.5
2,014,266	+		IAI47_09530	0.52	+1.6
2,014,350	+		IAI47_09530	0.68	+0.0
2,014,350	+		IAI47_09530	0.68	+0.4
2,014,351	-		IAI47_09530	0.68	-0.9
2,014,410	+		IAI47_09530	0.79	+0.8
2,014,410	+		IAI47_09530	0.79	-0.2
2,014,410	+		IAI47_09530	0.79	+0.3
2,014,411	-		IAI47_09530	0.79	-0.2
2,014,413	+		IAI47_09530	0.79	+0.2
2,014,413	+		IAI47_09530	0.79	-1.7
2,014,413	+		IAI47_09530	0.79	-1.3
2,014,413	+		IAI47_09530	0.79	-0.9
2,014,413	+		IAI47_09530	0.79	-0.6
2,014,414	-		IAI47_09530	0.80	-0.1
2,014,414	-		IAI47_09530	0.80	-0.0
2,014,414	-		IAI47_09530	0.80	+1.0
2,014,414	-		IAI47_09530	0.80	-0.6
2,014,414	-		IAI47_09530	0.80	-1.6
2,014,414	-		IAI47_09530	0.80	+0.0
2,014,414	-		IAI47_09530	0.80	-1.2
2,014,479	+				+1.3
2,014,479	+				+0.0
2,014,479	+				+0.0
2,014,479	+				+1.2
2,014,479	+				-0.5
2,014,479	+				+0.0
2,014,480	-				+0.7
2,014,480	-				+0.7
2,014,480	-				+1.8
2,014,480	-				+0.0
2,014,485	+				+0.2
2,014,486	-				-0.8
2,014,554	+				+0.5
2,014,554	+				-0.2
2,014,554	+				+0.4
2,014,555	-				+0.5
2,014,555	-				-0.3
2,014,555	-				+1.2
2,014,582	+				+1.0
2,014,582	+				+2.2
2,014,582	+				-0.4
2,014,583	-				+0.7
2,014,583	-				-1.2
2,014,583	-				-0.8
2,014,583	-				+0.7
2,014,583	-				-0.3
2,014,584	+				+1.0
2,014,584	+				-0.4
2,014,631	-				+0.2
2,014,631	-				-0.8
2,014,641	-				-0.1
2,014,682	+				-0.6
2,014,682	+				+0.3
2,014,682	+				+1.8
2,014,682	+				-0.2
2,014,682	+				-2.8
2,014,683	-				+0.8
2,014,683	-				-0.1
2,014,683	-				+0.2
2,014,686	+				+1.3
2,014,686	+				-0.3
2,014,686	+				-1.2
2,014,687	-				+1.0
2,014,687	-				+0.9
2,014,687	-				+0.6
2,014,687	-				+0.7
2,014,687	-				+3.2
2,014,687	-				+0.9
2,014,687	-				+1.5
2,014,689	+				-0.5
2,014,689	+				-2.4
2,014,689	+				-1.8
2,014,689	+				-1.2
2,014,690	-				+1.7
2,014,690	-				+1.1
2,014,694	+				-0.6
2,014,694	+				+0.0
2,014,694	+				+2.1
2,014,694	+				-1.3
2,014,695	-				+0.7
2,014,695	-				+1.2
2,014,695	-				+1.2
2,014,797	+				+0.0
2,014,798	-				+0.4
2,014,798	-				+1.1
2,014,901	+		IAI47_09535	0.15	+0.5
2,014,917	+		IAI47_09535	0.16	-1.1
2,014,917	+		IAI47_09535	0.16	-1.4
2,014,917	+		IAI47_09535	0.16	+1.1
2,014,917	+		IAI47_09535	0.16	+0.2
2,014,918	-		IAI47_09535	0.16	+0.1
2,014,918	-		IAI47_09535	0.16	+1.5
2,014,918	-		IAI47_09535	0.16	+0.1
2,014,918	-		IAI47_09535	0.16	-0.6
2,014,919	+		IAI47_09535	0.16	+0.3
2,014,919	+				+3.2
2,014,919	+		IAI47_09535	0.16	+0.8
2,014,920	-		IAI47_09535	0.16	-0.3
2,014,920	-		IAI47_09535	0.16	+0.3
2,014,920	-		IAI47_09535	0.16	-0.3
2,014,920	-		IAI47_09535	0.16	+0.4
2,014,920	-		IAI47_09535	0.16	+1.0
2,014,920	-		IAI47_09535	0.16	+0.5
2,014,931	+		IAI47_09535	0.17	+0.4
2,014,968	+		IAI47_09535	0.19	-1.1
2,014,969	-		IAI47_09535	0.19	+2.5
2,014,969	-		IAI47_09535	0.19	+1.6
2,014,982	+		IAI47_09535	0.20	-0.5
2,014,987	-		IAI47_09535	0.21	+1.6
2,015,091	-		IAI47_09535	0.28	+1.4
2,015,096	-		IAI47_09535	0.28	-0.9
2,015,115	-		IAI47_09535	0.29	+0.3
2,015,323	+		IAI47_09535	0.43	-1.8
2,015,363	+		IAI47_09535	0.46	-1.7