Strain Fitness in Pantoea sp. MT58 around IAI47_09510

Experiment: Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50
2,006,672	+		IAI47_09500	0.69	+0.7
2,006,861	+		IAI47_09500	0.77	-1.0
2,006,882	+		IAI47_09500	0.77	-0.2
2,006,883	-		IAI47_09500	0.77	+0.8
2,006,918	-		IAI47_09500	0.79	-0.2
2,006,954	+				+3.2
2,006,954	+		IAI47_09500	0.80	+1.6
2,006,955	-		IAI47_09500	0.80	+2.2
2,006,955	-		IAI47_09500	0.80	+1.0
2,006,955	-		IAI47_09500	0.80	+1.4
2,006,973	-		IAI47_09500	0.81	-0.5
2,006,973	-		IAI47_09500	0.81	-0.4
2,007,008	+		IAI47_09500	0.82	-0.4
2,007,008	+		IAI47_09500	0.82	+0.3
2,007,008	+		IAI47_09500	0.82	-0.6
2,007,008	+		IAI47_09500	0.82	-0.2
2,007,009	-		IAI47_09500	0.82	+0.3
2,007,011	+		IAI47_09500	0.82	+0.6
2,007,011	+		IAI47_09500	0.82	-0.1
2,007,012	-		IAI47_09500	0.82	+0.0
2,007,012	-		IAI47_09500	0.82	-0.5
2,007,047	+		IAI47_09500	0.84	-0.3
2,007,101	+		IAI47_09500	0.86	+1.6
2,007,101	+		IAI47_09500	0.86	-0.9
2,007,102	-		IAI47_09500	0.86	+0.4
2,007,173	+		IAI47_09500	0.89	-0.2
2,007,173	+		IAI47_09500	0.89	+0.5
2,007,173	+		IAI47_09500	0.89	-0.5
2,007,173	+		IAI47_09500	0.89	-0.1
2,007,173	+		IAI47_09500	0.89	+0.8
2,007,174	-		IAI47_09500	0.89	-1.5
2,007,203	-		IAI47_09500	0.90	+1.3
2,007,203	-		IAI47_09500	0.90	-1.2
2,007,203	-		IAI47_09500	0.90	+0.7
2,007,229	+				-1.3
2,007,229	+				-0.4
2,007,230	-				-1.3
2,007,234	+				-1.0
2,007,234	+				-0.3
2,007,234	+				+1.5
2,007,234	+				-0.4
2,007,234	+				+0.4
2,007,234	+				+0.1
2,007,235	-				-1.6
2,007,235	-				-0.7
2,007,236	+				+0.2
2,007,236	+				-0.4
2,007,237	-				-0.6
2,007,237	-				-0.4
2,007,237	-				-0.8
2,007,237	-				-0.7
2,007,237	-				-0.2
2,007,293	+				+0.2
2,007,294	-				-1.1
2,007,294	-				+2.1
2,007,307	+				+0.4
2,007,308	-				-0.7
2,007,308	-				-1.3
2,007,353	+				-1.4
2,007,353	+				+0.1
2,007,353	+				+0.1
2,007,353	+				+0.6
2,007,353	+				+0.5
2,007,353	+				+1.2
2,007,354	-				+1.3
2,007,354	-				+0.2
2,007,357	+				-0.7
2,007,357	+				-0.0
2,007,358	-				+0.8
2,007,358	-				+0.8
2,007,358	-				+0.9
2,007,427	+				+0.2
2,007,428	-				-1.8
2,007,428	-				+0.9
2,007,486	+				+0.8
2,007,486	+				+0.3
2,007,486	+				+1.3
2,007,487	-				-1.8
2,007,571	+		IAI47_09505	0.53	+0.7
2,007,571	+		IAI47_09505	0.53	+0.2
2,007,571	+		IAI47_09505	0.53	+0.0
2,007,572	-		IAI47_09505	0.54	+0.5
2,007,572	-		IAI47_09505	0.54	+3.2
2,007,572	-		IAI47_09505	0.54	-1.6
2,007,579	+		IAI47_09505	0.58	-0.4
2,007,580	-		IAI47_09505	0.58	+0.5
2,007,580	-		IAI47_09505	0.58	+0.4
2,007,695	+				-0.4
2,007,695	+				+1.4
2,007,695	+				-0.4
2,007,695	+				-0.1
2,007,696	-				-0.5
2,007,696	-				-0.5
2,007,784	+		IAI47_09510	0.34	-0.6
2,007,838	-		IAI47_09510	0.50	-1.1
2,007,860	-		IAI47_09510	0.56	-0.3
2,007,952	+		IAI47_09510	0.83	-0.2
2,007,952	+		IAI47_09510	0.83	+0.2
2,007,952	+		IAI47_09510	0.83	+1.1
2,007,952	+		IAI47_09510	0.83	-0.7
2,007,952	+		IAI47_09510	0.83	-0.5
2,007,953	-		IAI47_09510	0.83	-0.7
2,007,953	-		IAI47_09510	0.83	-0.5
2,007,953	-		IAI47_09510	0.83	+1.0
2,007,953	-		IAI47_09510	0.83	-2.4
2,007,953	-		IAI47_09510	0.83	+2.2
2,007,953	-		IAI47_09510	0.83	-0.3
2,007,953	-		IAI47_09510	0.83	-0.5
2,007,966	+		IAI47_09510	0.87	+0.7
2,007,967	-		IAI47_09510	0.88	-0.7
2,008,095	+				+0.5
2,008,211	+		IAI47_09515	0.23	-0.7
2,008,211	+		IAI47_09515	0.23	-0.2
2,008,212	-		IAI47_09515	0.23	-1.0
2,008,212	-		IAI47_09515	0.23	+1.7
2,008,212	-		IAI47_09515	0.23	+1.2
2,008,212	-		IAI47_09515	0.23	-1.2
2,008,236	+		IAI47_09515	0.27	-0.7
2,008,266	+		IAI47_09515	0.32	-0.9
2,008,266	+		IAI47_09515	0.32	-2.2
2,008,287	+		IAI47_09515	0.36	+0.1
2,008,356	-		IAI47_09515	0.47	+0.1
2,008,371	+		IAI47_09515	0.50	-1.7
2,008,371	+		IAI47_09515	0.50	+0.9
2,008,371	+		IAI47_09515	0.50	-0.1
2,008,388	+		IAI47_09515	0.53	-1.3
2,008,388	+		IAI47_09515	0.53	-0.8
2,008,388	+		IAI47_09515	0.53	-0.7
2,008,389	-		IAI47_09515	0.53	+0.2
2,008,489	-		IAI47_09515	0.69	-1.4
2,008,513	+		IAI47_09515	0.73	+0.1
2,008,514	-		IAI47_09515	0.74	-0.7
2,008,514	-		IAI47_09515	0.74	+2.2
2,008,514	-		IAI47_09515	0.74	+1.6
2,008,514	-		IAI47_09515	0.74	-0.0
2,008,558	+		IAI47_09515	0.81	-0.1
2,008,558	+		IAI47_09515	0.81	+1.6
2,008,558	+		IAI47_09515	0.81	-0.2
2,008,559	-		IAI47_09515	0.81	+1.6
2,008,559	-		IAI47_09515	0.81	-1.1
2,008,559	-		IAI47_09515	0.81	+0.7
2,008,559	-		IAI47_09515	0.81	-0.2
2,008,559	-		IAI47_09515	0.81	-0.7
2,008,559	-		IAI47_09515	0.81	+0.1
2,008,572	+		IAI47_09515	0.83	+1.5
2,008,572	+		IAI47_09515	0.83	-0.8
2,008,598	+		IAI47_09515	0.88	+1.2
2,008,598	+		IAI47_09515	0.88	+2.2
2,008,598	+		IAI47_09515	0.88	-0.5
2,008,598	+		IAI47_09515	0.88	-0.4
2,008,598	+		IAI47_09515	0.88	-1.6
2,008,599	-		IAI47_09515	0.88	+0.3
2,008,628	+				+0.4
2,008,657	+				+0.1
2,008,718	-				+0.7
2,008,724	+				+1.3
2,008,724	+				-2.1
2,008,724	+				+1.4
2,008,725	-				+0.9
2,008,725	-				+1.3
2,008,725	-				+0.5
2,008,725	-				-0.5
2,008,779	+				-0.3
2,008,779	+				-0.3
2,008,786	+				-0.3
2,008,786	+				+1.2
2,008,829	+				+0.8
2,008,829	+				+1.8
2,008,829	+				-1.6
2,008,834	+				-1.6
2,008,834	+				+1.8
2,008,835	-				-0.7
2,008,844	+				-0.3
2,008,844	+				+0.6
2,008,849	+				-0.5
2,008,889	+				-0.2
2,008,890	-				+0.4
2,008,890	-				+1.2
2,008,890	-				-1.6
2,008,890	-				+0.4
2,008,894	-				-0.2
2,008,911	-				+0.6
2,008,915	+				-0.6
2,008,915	+				+1.9
2,008,916	-				+0.5
2,008,916	-				-0.3
2,008,916	-				+0.4
2,008,926	+				-0.8
2,008,926	+				-1.0
2,008,926	+				+0.6
2,008,926	+				-0.4
2,008,926	+				+0.3
2,008,926	+				-1.7
2,008,927	-				-2.3
2,008,927	-				-1.5
2,008,941	+				+0.8
2,008,982	+				-0.8
2,008,982	+				+0.4
2,008,983	-				-0.7