Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c29510

Experiment: L-Serine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Serine (C)
3,084,432	+		PGA1_c29490	0.87	-2.7
3,084,443	+		PGA1_c29490	0.88	-2.7
3,084,580	+				-2.3
3,084,657	-				-1.2
3,084,671	+				-0.8
3,084,704	-				+0.0
3,084,749	-				-0.3
3,084,764	+				+0.2
3,084,764	+				-1.0
3,084,772	-				-0.1
3,084,822	+		PGA1_c29500	0.11	+0.6
3,084,830	-		PGA1_c29500	0.12	-0.5
3,084,876	+		PGA1_c29500	0.22	+0.2
3,084,884	-		PGA1_c29500	0.24	+0.1
3,084,884	-		PGA1_c29500	0.24	+0.2
3,084,884	-		PGA1_c29500	0.24	-0.4
3,084,884	-		PGA1_c29500	0.24	-0.4
3,084,884	-		PGA1_c29500	0.24	+0.8
3,084,905	+		PGA1_c29500	0.28	+1.2
3,085,024	+		PGA1_c29500	0.54	-0.5
3,085,059	+		PGA1_c29500	0.61	-0.0
3,085,067	-		PGA1_c29500	0.63	-0.2
3,085,143	+		PGA1_c29500	0.79	+0.1
3,085,166	-		PGA1_c29500	0.84	+0.4
3,085,242	+				+0.4
3,085,248	+				-0.3
3,085,248	+				-0.2
3,085,256	-				-0.5
3,085,340	-				-0.2
3,085,343	+				+0.1
3,085,361	+				-0.3
3,085,369	-				+0.7
3,085,369	-				-0.5
3,085,369	-				+0.1
3,085,369	-				-0.3
3,085,369	-				+0.3
3,085,395	+				+0.4
3,085,398	-				+0.6
3,085,486	+		PGA1_c29510	0.14	+0.7
3,085,503	-		PGA1_c29510	0.16	-0.3
3,085,526	+		PGA1_c29510	0.19	+0.5
3,085,526	+		PGA1_c29510	0.19	+1.2
3,085,534	-		PGA1_c29510	0.20	+0.4
3,085,536	+		PGA1_c29510	0.20	+0.5
3,085,536	+		PGA1_c29510	0.20	+0.9
3,085,543	+		PGA1_c29510	0.21	+0.2
3,085,591	-		PGA1_c29510	0.27	+1.1
3,085,632	-		PGA1_c29510	0.32	+1.4
3,085,636	+		PGA1_c29510	0.33	-1.1
3,085,644	-		PGA1_c29510	0.34	+0.3
3,085,701	+		PGA1_c29510	0.41	+0.8
3,085,709	-		PGA1_c29510	0.42	+0.1
3,085,720	+		PGA1_c29510	0.43	+1.0
3,085,728	-		PGA1_c29510	0.44	+0.4
3,085,790	+		PGA1_c29510	0.51	+0.9
3,085,790	+		PGA1_c29510	0.51	-0.4
3,085,790	+		PGA1_c29510	0.51	+1.2
3,085,790	+		PGA1_c29510	0.51	+0.6
3,085,790	+		PGA1_c29510	0.51	+0.3
3,085,798	-		PGA1_c29510	0.52	+0.7
3,085,798	-		PGA1_c29510	0.52	+0.3
3,085,798	-		PGA1_c29510	0.52	+0.7
3,085,798	-		PGA1_c29510	0.52	+1.7
3,085,798	-		PGA1_c29510	0.52	+0.8
3,085,798	-		PGA1_c29510	0.52	+0.6
3,085,798	-		PGA1_c29510	0.52	+0.8
3,085,826	-		PGA1_c29510	0.56	+1.0
3,085,830	-		PGA1_c29510	0.56	+0.4
3,085,833	+		PGA1_c29510	0.57	+1.0
3,085,841	-		PGA1_c29510	0.58	+1.0
3,085,841	-		PGA1_c29510	0.58	+0.5
3,085,841	-		PGA1_c29510	0.58	+1.3
3,085,841	-		PGA1_c29510	0.58	+0.3
3,085,841	-		PGA1_c29510	0.58	+1.2
3,085,841	-		PGA1_c29510	0.58	+0.1
3,085,841	-		PGA1_c29510	0.58	+0.9
3,085,841	-		PGA1_c29510	0.58	+1.0
3,085,854	-		PGA1_c29510	0.59	-0.0
3,085,868	+		PGA1_c29510	0.61	+0.8
3,085,904	+		PGA1_c29510	0.65	-0.1
3,085,904	+		PGA1_c29510	0.65	+0.6
3,085,917	-		PGA1_c29510	0.67	+0.8
3,085,933	-		PGA1_c29510	0.69	+1.0
3,085,939	+		PGA1_c29510	0.70	+0.7
3,085,960	+		PGA1_c29510	0.72	-0.4
3,085,960	+		PGA1_c29510	0.72	+0.2
3,085,997	-		PGA1_c29510	0.77	+0.3
3,086,022	+		PGA1_c29510	0.80	+0.9
3,086,027	+		PGA1_c29510	0.80	+0.9
3,086,035	-		PGA1_c29510	0.81	-0.1
3,086,074	-		PGA1_c29510	0.86	+0.6
3,086,123	+				+0.5
3,086,123	+				+0.9
3,086,131	-				+1.1
3,086,133	+				+0.9
3,086,133	+				+1.8
3,086,160	+				+1.4
3,086,168	-				+0.9
3,086,171	-				+0.2
3,086,188	-				+0.4
3,086,196	+				+0.5
3,086,196	+				-0.2
3,086,199	-				-0.3
3,086,204	-				+0.0
3,086,204	-				+0.6
3,086,204	-				-0.7
3,086,228	+				-0.7
3,086,228	+				-1.0
3,086,228	+				+0.8
3,086,229	-				+0.9
3,086,233	+				+0.1
3,086,233	+				-0.5
3,086,233	+				+0.3
3,086,233	+				-2.7
3,086,233	+				-0.0
3,086,233	+				-0.7
3,086,233	+				+0.2
3,086,233	+				-0.7
3,086,233	+				+0.0
3,086,233	+				-0.4
3,086,233	+				+0.3
3,086,233	+				+0.5
3,086,236	-				+0.1
3,086,236	-				+0.4
3,086,239	-				+0.5
3,086,239	-				-0.3
3,086,241	-				-0.2
3,086,241	-				-0.6
3,086,241	-				-0.5
3,086,241	-				-0.3
3,086,315	-				+0.6
3,086,317	-				+0.9
3,086,346	+				+0.8
3,086,356	+				+1.0
3,086,356	-				+0.7
3,086,366	-				+0.2
3,086,367	+				+0.0
3,086,367	+				+0.7
3,086,375	-				+0.7
3,086,393	+				+0.2
3,086,408	+				+0.6
3,086,416	+				+0.4
3,086,416	+				+0.8
3,086,416	+				+1.9
3,086,424	-				+1.6
3,086,467	+				+0.4
3,086,477	+				+1.4
3,086,477	+				+0.8
3,086,477	+				+0.6
3,086,477	+				+1.3
3,086,485	-				+0.8
3,086,485	-				-0.2
3,086,485	-				+0.4
3,086,488	-		PGA1_c29520	0.10	+0.4
3,086,488	-		PGA1_c29520	0.10	+0.4
3,086,502	+		PGA1_c29520	0.11	+1.4
3,086,508	-		PGA1_c29520	0.11	+0.9
3,086,510	-		PGA1_c29520	0.11	+0.8
3,086,556	-		PGA1_c29520	0.14	+0.4
3,086,556	-		PGA1_c29520	0.14	+0.6
3,086,559	+		PGA1_c29520	0.15	+0.6
3,086,561	-		PGA1_c29520	0.15	+1.3
3,086,567	-		PGA1_c29520	0.15	+1.0
3,086,582	+		PGA1_c29520	0.16	+0.9
3,086,585	-		PGA1_c29520	0.16	+0.9
3,086,617	+		PGA1_c29520	0.18	+0.9
3,086,617	+		PGA1_c29520	0.18	+0.8
3,086,617	+		PGA1_c29520	0.18	+0.1
3,086,617	+		PGA1_c29520	0.18	+0.0
3,086,625	-		PGA1_c29520	0.19	+1.0
3,086,625	-		PGA1_c29520	0.19	-0.1
3,086,646	+		PGA1_c29520	0.20	+1.4
3,086,651	+		PGA1_c29520	0.20	+0.3
3,086,651	+		PGA1_c29520	0.20	+1.1
3,086,654	-		PGA1_c29520	0.21	+1.0
3,086,659	-		PGA1_c29520	0.21	+0.7
3,086,666	-		PGA1_c29520	0.21	+0.1
3,086,725	+		PGA1_c29520	0.25	+0.1
3,086,725	-		PGA1_c29520	0.25	+0.4
3,086,733	-		PGA1_c29520	0.26	+0.6
3,086,733	-		PGA1_c29520	0.26	+0.6
3,086,808	+		PGA1_c29520	0.30	+0.3
3,086,831	+		PGA1_c29520	0.32	+1.2
3,086,831	+		PGA1_c29520	0.32	+0.3
3,086,831	+		PGA1_c29520	0.32	+0.6
3,086,831	+		PGA1_c29520	0.32	-0.2
3,086,831	+		PGA1_c29520	0.32	+1.0
3,086,831	+		PGA1_c29520	0.32	+0.9
3,086,839	-		PGA1_c29520	0.32	+1.3
3,086,839	-		PGA1_c29520	0.32	+1.0
3,086,839	-		PGA1_c29520	0.32	+0.1
3,086,839	-		PGA1_c29520	0.32	+0.5
3,086,848	+		PGA1_c29520	0.33	+0.8
3,086,883	+		PGA1_c29520	0.35	+1.1
3,086,897	-		PGA1_c29520	0.36	+1.1
3,086,918	-		PGA1_c29520	0.37	+1.4
3,086,923	+		PGA1_c29520	0.38	+1.7
3,086,923	+		PGA1_c29520	0.38	+0.8
3,086,974	-		PGA1_c29520	0.41	+0.4
3,087,054	-		PGA1_c29520	0.46	+1.9
3,087,065	+		PGA1_c29520	0.47	-0.1
3,087,085	+		PGA1_c29520	0.48	+0.2
3,087,093	-		PGA1_c29520	0.48	+1.0
3,087,116	+		PGA1_c29520	0.50	+0.3
3,087,116	+		PGA1_c29520	0.50	+0.6
3,087,116	+		PGA1_c29520	0.50	+0.6
3,087,142	+		PGA1_c29520	0.51	+0.8
3,087,150	-		PGA1_c29520	0.52	+1.3
3,087,155	-		PGA1_c29520	0.52	+1.1