Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c19150

Experiment: L-Serine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Serine (C)
1,986,107	-		PGA1_c19130	0.50	-0.2
1,986,111	+		PGA1_c19130	0.51	+1.7
1,986,136	+		PGA1_c19130	0.56	+1.1
1,986,191	-		PGA1_c19130	0.68	+0.3
1,986,225	-		PGA1_c19130	0.76	+0.1
1,986,349	+				+0.8
1,986,349	+				-0.1
1,986,349	+				+0.3
1,986,349	+				+0.7
1,986,349	+				-0.7
1,986,349	+				+0.3
1,986,349	+				+0.1
1,986,349	+				+0.6
1,986,349	+				-0.5
1,986,357	-				-0.9
1,986,357	-				+0.2
1,986,357	-				+0.5
1,986,357	-				-0.4
1,986,366	+				+0.1
1,986,418	-				-1.8
1,986,456	+				+0.1
1,986,472	+				-0.1
1,986,472	+				+0.5
1,986,472	+				-1.2
1,986,472	+				+0.5
1,986,472	+				+0.4
1,986,472	+				-0.6
1,986,472	+				-0.0
1,986,472	+				-0.2
1,986,480	-				-1.2
1,986,480	-				+0.1
1,986,480	-				-0.9
1,986,480	-				-1.3
1,986,480	-				+0.5
1,986,480	-				-0.1
1,986,480	-				+0.4
1,986,480	-				-0.3
1,986,480	-				+0.6
1,986,480	-				-0.7
1,986,480	-				+1.0
1,986,507	-				+0.7
1,986,517	-				-0.1
1,986,560	-				+0.9
1,986,563	-				-0.1
1,986,625	-		PGA1_c19140	0.20	+0.7
1,986,647	-		PGA1_c19140	0.24	+1.6
1,986,671	-		PGA1_c19140	0.28	+0.9
1,986,698	+		PGA1_c19140	0.32	+1.1
1,986,769	+		PGA1_c19140	0.45	+1.7
1,986,809	-		PGA1_c19140	0.52	+0.1
1,986,851	+		PGA1_c19140	0.59	+0.5
1,986,899	-		PGA1_c19140	0.68	-0.2
1,986,904	-		PGA1_c19140	0.68	+0.6
1,986,917	-		PGA1_c19140	0.71	+1.1
1,987,023	+		PGA1_c19140	0.89	+0.5
1,987,024	+		PGA1_c19140	0.89	+1.1
1,987,074	+				+0.8
1,987,074	+				+0.5
1,987,082	-				+1.1
1,987,126	+				+0.6
1,987,195	+				+1.8
1,987,203	-				-0.7
1,987,232	-				+0.6
1,987,232	-				+1.1
1,987,275	-				+1.0
1,987,294	+				+0.8
1,987,497	+		PGA1_c19150	0.14	+0.7
1,987,583	-		PGA1_c19150	0.17	+0.6
1,987,926	+		PGA1_c19150	0.28	+0.4
1,987,926	-		PGA1_c19150	0.28	+0.6
1,988,040	-		PGA1_c19150	0.32	+1.5
1,988,060	+		PGA1_c19150	0.32	+1.5
1,988,060	+		PGA1_c19150	0.32	+1.6
1,988,060	+		PGA1_c19150	0.32	-0.2
1,988,068	-		PGA1_c19150	0.33	+1.0
1,988,098	-		PGA1_c19150	0.34	+0.4
1,988,167	-		PGA1_c19150	0.36	+1.1
1,988,189	-		PGA1_c19150	0.37	+0.9
1,988,338	-		PGA1_c19150	0.42	+0.4
1,988,443	+		PGA1_c19150	0.45	+0.5
1,988,443	+		PGA1_c19150	0.45	+1.0
1,988,443	+		PGA1_c19150	0.45	+0.9
1,988,443	+		PGA1_c19150	0.45	+0.2
1,988,449	+		PGA1_c19150	0.45	+0.7
1,988,469	+		PGA1_c19150	0.46	+0.6
1,988,469	+		PGA1_c19150	0.46	+0.8
1,988,469	+		PGA1_c19150	0.46	+1.0
1,988,477	-		PGA1_c19150	0.46	+0.3
1,988,477	-		PGA1_c19150	0.46	+0.8
1,988,477	-		PGA1_c19150	0.46	+1.1
1,988,568	-		PGA1_c19150	0.49	-0.2
1,988,570	+		PGA1_c19150	0.49	-0.6
1,988,893	+		PGA1_c19150	0.60	-0.4
1,988,910	+		PGA1_c19150	0.60	+0.4
1,988,936	+		PGA1_c19150	0.61	+1.9
1,989,163	-		PGA1_c19150	0.69	+0.3
1,989,163	-		PGA1_c19150	0.69	+1.0
1,989,165	-		PGA1_c19150	0.69	+1.0
1,989,226	+		PGA1_c19150	0.71	+0.4
1,989,244	-		PGA1_c19150	0.71	+0.1
1,989,312	-		PGA1_c19150	0.74	+1.0
1,989,332	+		PGA1_c19150	0.74	+1.7
1,989,524	+		PGA1_c19150	0.81	+1.2
1,989,524	+		PGA1_c19150	0.81	+0.6
1,989,631	+		PGA1_c19150	0.84	+1.8
1,989,633	+		PGA1_c19150	0.84	+1.3
1,989,639	-		PGA1_c19150	0.84	+0.8
1,989,662	+		PGA1_c19150	0.85	+1.3
1,989,705	-		PGA1_c19150	0.87	+0.5
1,989,756	-		PGA1_c19150	0.88	+0.9
1,989,791	+		PGA1_c19150	0.89	+0.5
1,989,800	-		PGA1_c19150	0.90	+0.5
1,989,912	-				+0.9
1,989,970	+				+0.9
1,989,970	+				+0.5
1,990,013	+				-3.1
1,990,026	-				+0.6
1,990,031	-				+1.0
1,990,069	-				+1.8
1,990,069	-				-0.3
1,990,122	+				+1.4
1,990,238	+		PGA1_c19160	0.21	+0.9
1,990,244	-		PGA1_c19160	0.23	+0.4
1,990,244	-		PGA1_c19160	0.23	+0.1
1,990,244	-		PGA1_c19160	0.23	-0.0
1,990,244	-		PGA1_c19160	0.23	+0.8
1,990,244	-		PGA1_c19160	0.23	+0.6
1,990,244	-		PGA1_c19160	0.23	-0.1
1,990,244	-		PGA1_c19160	0.23	+0.9
1,990,256	-		PGA1_c19160	0.27	+0.8
1,990,277	-		PGA1_c19160	0.33	+1.3
1,990,277	-		PGA1_c19160	0.33	+1.0
1,990,277	-		PGA1_c19160	0.33	+1.6
1,990,277	-				+1.0
1,990,303	-		PGA1_c19160	0.41	+2.0
1,990,303	-		PGA1_c19160	0.41	+0.4
1,990,323	-		PGA1_c19160	0.47	+0.4
1,990,335	-		PGA1_c19160	0.51	+0.6
1,990,349	+		PGA1_c19160	0.55	+1.4
1,990,349	+		PGA1_c19160	0.55	+1.1
1,990,349	+		PGA1_c19160	0.55	+0.5
1,990,349	+		PGA1_c19160	0.55	+0.8
1,990,357	-		PGA1_c19160	0.57	+0.9
1,990,357	-		PGA1_c19160	0.57	+0.9
1,990,357	-		PGA1_c19160	0.57	+0.8
1,990,402	+		PGA1_c19160	0.71	+1.0
1,990,497	-				-0.1
1,990,497	-				+0.6
1,990,497	-				+1.3
1,990,497	-				+0.4
1,990,507	-				+0.8
1,990,517	-				+0.2
1,990,541	-				-0.1
1,990,652	-				+0.6
1,990,682	-				+0.2
1,990,720	+		PGA1_c19170	0.11	+1.2
1,990,736	+		PGA1_c19170	0.12	+1.2
1,990,744	-		PGA1_c19170	0.13	+0.9
1,990,853	-		PGA1_c19170	0.22	+0.7
1,990,871	-		PGA1_c19170	0.23	+1.3
1,990,923	-		PGA1_c19170	0.27	+0.5
1,990,923	-		PGA1_c19170	0.27	-0.1
1,990,941	-		PGA1_c19170	0.29	+0.6
1,990,995	+		PGA1_c19170	0.33	+1.2
1,991,003	-		PGA1_c19170	0.34	+0.6
1,991,003	-		PGA1_c19170	0.34	+0.7
1,991,025	+		PGA1_c19170	0.36	+1.0
1,991,043	-		PGA1_c19170	0.37	+1.4
1,991,056	+		PGA1_c19170	0.38	-0.2