Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c14310

Experiment: L-Serine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPGA1_c14290 and PGA1_c14300 are separated by 124 nucleotidesPGA1_c14300 and PGA1_c14310 are separated by 5 nucleotidesPGA1_c14310 and PGA1_c14320 are separated by 4 nucleotidesPGA1_c14320 and PGA1_c14330 overlap by 4 nucleotides PGA1_c14290: PGA1_c14290 - putative outer membrane protein, at 1,484,601 to 1,485,251 _c14290 PGA1_c14300: PGA1_c14300 - (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase FabZ, at 1,485,376 to 1,485,840 _c14300 PGA1_c14310: PGA1_c14310 - acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase LpxA, at 1,485,846 to 1,486,631 _c14310 PGA1_c14320: PGA1_c14320 - Uncharacterized protein conserved in bacteria, at 1,486,636 to 1,487,424 _c14320 PGA1_c14330: PGA1_c14330 - lipid-A-disaccharide synthase LpxB, at 1,487,421 to 1,488,602 _c14330 Position (kb) 1485 1486 1487Strain fitness (log2 ratio) -1 0 1at 1485.230 kb on + strandat 1485.238 kb on - strandat 1485.285 kb on + strandat 1485.293 kb on - strandat 1485.295 kb on + strandat 1485.313 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Serine (C)
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1,485,230 + +0.3
1,485,238 - +0.5
1,485,285 + -0.3
1,485,293 - +1.2
1,485,295 + +0.5
1,485,313 - +0.1

Or see this region's nucleotide sequence