Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS23225 and BWI76_RS23230 overlap by 4 nucleotides BWI76_RS23230 and BWI76_RS23235 overlap by 4 nucleotides
BWI76_RS23225: BWI76_RS23225 - exonuclease V subunit alpha, at 4,838,453 to 4,840,288
_RS23225
BWI76_RS23230: BWI76_RS23230 - exodeoxyribonuclease V subunit beta, at 4,840,285 to 4,843,830
_RS23230
BWI76_RS23235: BWI76_RS23235 - pitrilysin, at 4,843,827 to 4,846,712
_RS23235
Position (kb)
4840
4841
4842
4843
4844 Strain fitness (log2 ratio)
-2
-1
0
1 at 4839.411 kb on + strand, within BWI76_RS23225 at 4839.713 kb on - strand, within BWI76_RS23225 at 4839.788 kb on + strand, within BWI76_RS23225 at 4839.951 kb on + strand, within BWI76_RS23225 at 4839.951 kb on + strand, within BWI76_RS23225 at 4840.660 kb on - strand, within BWI76_RS23230 at 4841.007 kb on - strand, within BWI76_RS23230 at 4841.684 kb on + strand, within BWI76_RS23230 at 4842.084 kb on - strand, within BWI76_RS23230 at 4842.218 kb on + strand, within BWI76_RS23230 at 4842.568 kb on + strand, within BWI76_RS23230 at 4843.097 kb on + strand, within BWI76_RS23230 at 4843.121 kb on + strand, within BWI76_RS23230 at 4843.210 kb on - strand, within BWI76_RS23230 at 4843.318 kb on - strand, within BWI76_RS23230 at 4843.502 kb on + strand at 4843.592 kb on - strand at 4844.147 kb on + strand, within BWI76_RS23235 at 4844.528 kb on - strand, within BWI76_RS23235 at 4844.657 kb on + strand, within BWI76_RS23235
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 4,839,411 + BWI76_RS23225 0.52 +1.4 4,839,713 - BWI76_RS23225 0.69 -0.8 4,839,788 + BWI76_RS23225 0.73 +0.1 4,839,951 + BWI76_RS23225 0.82 -0.2 4,839,951 + BWI76_RS23225 0.82 -1.2 4,840,660 - BWI76_RS23230 0.11 -2.3 4,841,007 - BWI76_RS23230 0.20 -1.2 4,841,684 + BWI76_RS23230 0.39 +0.9 4,842,084 - BWI76_RS23230 0.51 -1.5 4,842,218 + BWI76_RS23230 0.55 -2.4 4,842,568 + BWI76_RS23230 0.64 -2.2 4,843,097 + BWI76_RS23230 0.79 -0.6 4,843,121 + BWI76_RS23230 0.80 -1.8 4,843,210 - BWI76_RS23230 0.82 -2.1 4,843,318 - BWI76_RS23230 0.86 -2.1 4,843,502 + -1.9 4,843,592 - -2.3 4,844,147 + BWI76_RS23235 0.11 -1.4 4,844,528 - BWI76_RS23235 0.24 -0.3 4,844,657 + BWI76_RS23235 0.29 +0.5
Or see this region's nucleotide sequence