Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS18790 and BWI76_RS18795 are separated by 42 nucleotides BWI76_RS18795 and BWI76_RS18800 are separated by 1 nucleotides BWI76_RS18800 and BWI76_RS18805 are separated by 7 nucleotides
BWI76_RS18790: BWI76_RS18790 - elongation factor G, at 3,894,811 to 3,896,913
_RS18790
BWI76_RS18795: BWI76_RS18795 - hypothetical protein, at 3,896,956 to 3,897,150
_RS18795
BWI76_RS18800: BWI76_RS18800 - transcriptional regulator, at 3,897,152 to 3,897,463
_RS18800
BWI76_RS18805: BWI76_RS18805 - pyruvate:ferredoxin (flavodoxin) oxidoreductase, at 3,897,471 to 3,900,986
_RS18805
Position (kb) 3896
3897
3898 Strain fitness (log2 ratio) -1
0
1 at 3896.002 kb on + strand, within BWI76_RS18790 at 3896.273 kb on + strand, within BWI76_RS18790 at 3896.311 kb on - strand, within BWI76_RS18790 at 3896.380 kb on + strand, within BWI76_RS18790 at 3896.648 kb on - strand, within BWI76_RS18790 at 3896.658 kb on + strand, within BWI76_RS18790 at 3897.135 kb on - strand at 3897.268 kb on + strand, within BWI76_RS18800
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 3,896,002 + BWI76_RS18790 0.57 +0.6 3,896,273 + BWI76_RS18790 0.70 +0.1 3,896,311 - BWI76_RS18790 0.71 -0.6 3,896,380 + BWI76_RS18790 0.75 +0.1 3,896,648 - BWI76_RS18790 0.87 +1.0 3,896,658 + BWI76_RS18790 0.88 -0.0 3,897,135 - +0.7 3,897,268 + BWI76_RS18800 0.37 +0.1
Or see this region's nucleotide sequence