Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS15640 and BWI76_RS15645 are separated by 3 nucleotides BWI76_RS15645 and BWI76_RS15650 overlap by 41 nucleotides BWI76_RS15650 and BWI76_RS15655 are separated by 14 nucleotides
BWI76_RS15640: BWI76_RS15640 - hypothetical protein, at 3,268,333 to 3,269,598
_RS15640
BWI76_RS15645: BWI76_RS15645 - gp6, at 3,269,602 to 3,270,528
_RS15645
BWI76_RS15650: BWI76_RS15650 - gp5, at 3,270,488 to 3,271,837
_RS15650
BWI76_RS15655: BWI76_RS15655 - hypothetical protein, at 3,271,852 to 3,273,330
_RS15655
Position (kb)
3270
3271
3272 Strain fitness (log2 ratio)
-2
-1
0
1 at 3269.615 kb on - strand at 3269.616 kb on + strand at 3269.822 kb on + strand, within BWI76_RS15645 at 3269.978 kb on + strand, within BWI76_RS15645 at 3270.003 kb on + strand, within BWI76_RS15645 at 3270.065 kb on - strand, within BWI76_RS15645 at 3270.128 kb on - strand, within BWI76_RS15645 at 3270.207 kb on + strand, within BWI76_RS15645 at 3270.207 kb on + strand, within BWI76_RS15645 at 3270.454 kb on - strand at 3270.507 kb on + strand at 3270.612 kb on + strand at 3270.771 kb on - strand, within BWI76_RS15650 at 3271.112 kb on + strand, within BWI76_RS15650 at 3271.293 kb on + strand, within BWI76_RS15650 at 3271.323 kb on - strand, within BWI76_RS15650 at 3271.383 kb on - strand, within BWI76_RS15650 at 3272.277 kb on + strand, within BWI76_RS15655 at 3272.345 kb on - strand, within BWI76_RS15655 at 3272.599 kb on - strand, within BWI76_RS15655 at 3272.599 kb on - strand, within BWI76_RS15655 at 3272.633 kb on - strand, within BWI76_RS15655
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 3,269,615 - -0.3 3,269,616 + -0.8 3,269,822 + BWI76_RS15645 0.24 -0.8 3,269,978 + BWI76_RS15645 0.41 -0.1 3,270,003 + BWI76_RS15645 0.43 -0.6 3,270,065 - BWI76_RS15645 0.50 -0.4 3,270,128 - BWI76_RS15645 0.57 -1.0 3,270,207 + BWI76_RS15645 0.65 +0.1 3,270,207 + BWI76_RS15645 0.65 -0.0 3,270,454 - +0.3 3,270,507 + +0.0 3,270,612 + +0.3 3,270,771 - BWI76_RS15650 0.21 -0.5 3,271,112 + BWI76_RS15650 0.46 -1.9 3,271,293 + BWI76_RS15650 0.60 +0.1 3,271,323 - BWI76_RS15650 0.62 -1.7 3,271,383 - BWI76_RS15650 0.66 -0.9 3,272,277 + BWI76_RS15655 0.29 -0.1 3,272,345 - BWI76_RS15655 0.33 -0.4 3,272,599 - BWI76_RS15655 0.51 -0.6 3,272,599 - BWI76_RS15655 0.51 -0.4 3,272,633 - BWI76_RS15655 0.53 -0.3
Or see this region's nucleotide sequence