Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS07990 and BWI76_RS07995 are separated by 127 nucleotides BWI76_RS07995 and BWI76_RS08000 are separated by 222 nucleotides BWI76_RS08000 and BWI76_RS08005 are separated by 186 nucleotides
BWI76_RS07990: BWI76_RS07990 - carbon-nitrogen hydrolase, at 1,694,881 to 1,695,669
_RS07990
BWI76_RS07995: BWI76_RS07995 - twin-arginine translocase subunit TatA, at 1,695,797 to 1,696,000
_RS07995
BWI76_RS08000: BWI76_RS08000 - lipoyl synthase, at 1,696,223 to 1,697,188
_RS08000
BWI76_RS08005: BWI76_RS08005 - transcriptional regulator, at 1,697,375 to 1,698,328
_RS08005
Position (kb) 1696
1697
1698 Strain fitness (log2 ratio) -1
0
1
2 at 1695.882 kb on + strand, within BWI76_RS07995 at 1695.890 kb on - strand, within BWI76_RS07995 at 1696.166 kb on - strand at 1697.308 kb on - strand at 1697.575 kb on - strand, within BWI76_RS08005 at 1697.970 kb on + strand, within BWI76_RS08005 at 1698.083 kb on + strand, within BWI76_RS08005 at 1698.091 kb on - strand, within BWI76_RS08005 at 1698.140 kb on + strand, within BWI76_RS08005
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 1,695,882 + BWI76_RS07995 0.42 +0.4 1,695,890 - BWI76_RS07995 0.46 -0.0 1,696,166 - +0.3 1,697,308 - -0.5 1,697,575 - BWI76_RS08005 0.21 +2.4 1,697,970 + BWI76_RS08005 0.62 +0.2 1,698,083 + BWI76_RS08005 0.74 +0.2 1,698,091 - BWI76_RS08005 0.75 -0.0 1,698,140 + BWI76_RS08005 0.80 -0.2
Or see this region's nucleotide sequence