Strain Fitness in Pantoea sp. MT58 around IAI47_19560

Experiment: Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50
139,448	+		IAI47_19555	0.10	-1.4
139,448	+		IAI47_19555	0.10	-0.7
139,448	+		IAI47_19555	0.10	-1.0
139,448	+		IAI47_19555	0.10	+1.0
139,449	-		IAI47_19555	0.10	+1.3
139,449	-		IAI47_19555	0.10	+0.2
139,449	-		IAI47_19555	0.10	-1.0
139,449	-		IAI47_19555	0.10	+0.8
139,562	-		IAI47_19555	0.22	+0.5
139,562	-		IAI47_19555	0.22	-0.1
139,562	-		IAI47_19555	0.22	-0.5
139,612	-		IAI47_19555	0.28	-1.7
139,654	+		IAI47_19555	0.32	+2.2
139,654	+		IAI47_19555	0.32	+0.3
139,655	-		IAI47_19555	0.33	+0.7
139,670	+		IAI47_19555	0.34	+0.9
139,670	+		IAI47_19555	0.34	+0.3
139,670	+		IAI47_19555	0.34	-2.3
139,670	+		IAI47_19555	0.34	+1.0
139,670	+		IAI47_19555	0.34	+1.6
139,671	-		IAI47_19555	0.34	+0.8
139,671	-		IAI47_19555	0.34	+0.3
139,671	-		IAI47_19555	0.34	+1.8
139,671	-		IAI47_19555	0.34	+0.3
139,671	-		IAI47_19555	0.34	+0.8
139,671	-		IAI47_19555	0.34	+0.2
139,671	-		IAI47_19555	0.34	+1.7
139,671	-		IAI47_19555	0.34	+2.1
139,671	-		IAI47_19555	0.34	+1.1
139,700	+		IAI47_19555	0.37	+0.6
139,700	+		IAI47_19555	0.37	+1.7
139,701	-		IAI47_19555	0.38	+0.2
139,711	+		IAI47_19555	0.39	-0.4
139,711	+		IAI47_19555	0.39	-0.2
139,711	+		IAI47_19555	0.39	+0.6
139,712	-		IAI47_19555	0.39	-0.6
139,731	-		IAI47_19555	0.41	+1.0
139,731	-		IAI47_19555	0.41	-1.7
139,758	+		IAI47_19555	0.44	+0.8
139,759	-		IAI47_19555	0.44	+0.5
139,759	-		IAI47_19555	0.44	+0.8
139,761	+		IAI47_19555	0.44	-0.0
139,762	-		IAI47_19555	0.44	+0.6
139,762	-		IAI47_19555	0.44	+1.0
139,762	-		IAI47_19555	0.44	+1.2
139,762	-		IAI47_19555	0.44	+1.4
139,762	-		IAI47_19555	0.44	+0.6
139,838	+		IAI47_19555	0.53	+0.1
139,838	+		IAI47_19555	0.53	-1.8
139,838	+		IAI47_19555	0.53	+0.3
139,857	+		IAI47_19555	0.55	+0.9
139,910	+		IAI47_19555	0.60	-0.7
139,910	+		IAI47_19555	0.60	-0.1
139,910	+		IAI47_19555	0.60	-0.6
139,910	+		IAI47_19555	0.60	+1.3
139,910	+		IAI47_19555	0.60	+1.8
139,911	-		IAI47_19555	0.60	+1.3
139,911	-		IAI47_19555	0.60	+0.8
139,966	+		IAI47_19555	0.66	-1.2
139,966	+		IAI47_19555	0.66	-0.0
139,966	+		IAI47_19555	0.66	-0.9
139,966	+		IAI47_19555	0.66	-0.0
139,966	+		IAI47_19555	0.66	-0.1
139,966	+		IAI47_19555	0.66	-0.7
139,967	-		IAI47_19555	0.67	+1.0
139,967	-		IAI47_19555	0.67	+1.3
139,967	-		IAI47_19555	0.67	+1.1
139,967	-		IAI47_19555	0.67	-1.4
139,967	-		IAI47_19555	0.67	+0.8
139,967	-		IAI47_19555	0.67	+1.3
139,970	+		IAI47_19555	0.67	+1.1
139,970	+		IAI47_19555	0.67	+0.6
139,970	+		IAI47_19555	0.67	-1.4
139,971	-		IAI47_19555	0.67	+0.9
139,971	-		IAI47_19555	0.67	+0.5
139,985	+		IAI47_19555	0.69	-0.8
139,985	+		IAI47_19555	0.69	-0.3
139,985	+		IAI47_19555	0.69	-0.4
139,985	+		IAI47_19555	0.69	-0.2
139,986	-		IAI47_19555	0.69	+1.2
139,986	-		IAI47_19555	0.69	+1.1
139,986	-		IAI47_19555	0.69	-0.0
140,040	-		IAI47_19555	0.75	+1.3
140,040	-		IAI47_19555	0.75	+0.2
140,124	-		IAI47_19555	0.84	-0.2
140,128	-		IAI47_19555	0.84	-0.5
140,168	+		IAI47_19555	0.88	-0.4
140,168	+		IAI47_19555	0.88	+0.9
140,168	+		IAI47_19555	0.88	+2.5
140,169	-		IAI47_19555	0.89	-0.4
140,169	-		IAI47_19555	0.89	+1.9
140,169	-		IAI47_19555	0.89	-0.0
140,169	-		IAI47_19555	0.89	-0.2
140,169	-		IAI47_19555	0.89	+1.3
140,173	-		IAI47_19555	0.89	+0.6
140,189	+				+0.0
140,213	+				-0.7
140,214	-				+2.0
140,220	-				+0.9
140,266	+				+0.0
140,267	-				+1.5
140,279	+				-0.2
140,282	-				-1.5
140,287	+				+2.1
140,296	-				-0.9
140,347	+				-1.0
140,348	-				+0.1
140,348	-				+0.8
140,348	-				-0.2
140,374	+				+0.1
140,374	+				-0.1
140,374	+				-0.3
140,374	+				-1.2
140,397	+				+1.3
140,398	-				-1.1
140,398	-				-0.9
140,420	+				+0.2
140,420	+				+0.8
140,420	+				+1.5
140,420	+				+0.1
140,420	+				-0.4
140,420	+				+0.3
140,421	-				+0.5
140,421	-				+0.1
140,422	+				+1.2
140,423	-				-0.1
140,423	-				-2.3
140,423	-				-0.8
140,431	+				+0.1
140,431	+				-0.2
140,431	+				-0.5
140,432	-				+2.3
140,444	+				-0.9
140,524	+		IAI47_19560	0.13	+0.5
140,524	+		IAI47_19560	0.13	+0.2
140,524	+		IAI47_19560	0.13	+0.0
140,525	-		IAI47_19560	0.13	-1.2
140,525	-		IAI47_19560	0.13	-0.2
140,527	+		IAI47_19560	0.14	+0.3
140,527	+		IAI47_19560	0.14	+1.8
140,527	+		IAI47_19560	0.14	+0.2
140,527	+		IAI47_19560	0.14	+1.3
140,527	+		IAI47_19560	0.14	-1.1
140,527	+		IAI47_19560	0.14	+2.1
140,527	+		IAI47_19560	0.14	+0.3
140,527	+		IAI47_19560	0.14	-0.7
140,527	+		IAI47_19560	0.14	+0.6
140,527	+		IAI47_19560	0.14	+0.3
140,527	+		IAI47_19560	0.14	+0.5
140,528	-		IAI47_19560	0.14	-0.1
140,528	-		IAI47_19560	0.14	+1.8
140,528	-		IAI47_19560	0.14	-0.4
140,528	-		IAI47_19560	0.14	-0.7
140,528	-		IAI47_19560	0.14	+0.1
140,557	-		IAI47_19560	0.18	+0.3
140,694	+		IAI47_19560	0.38	+0.4
140,694	+		IAI47_19560	0.38	+1.3
140,694	+		IAI47_19560	0.38	+1.5
140,694	+		IAI47_19560	0.38	+0.6
140,695	-		IAI47_19560	0.38	-0.9
140,695	-		IAI47_19560	0.38	+0.6
140,728	+		IAI47_19560	0.43	-0.5
140,728	+		IAI47_19560	0.43	-0.5
140,728	+		IAI47_19560	0.43	+0.4
140,728	+		IAI47_19560	0.43	+0.0
140,729	-		IAI47_19560	0.43	-0.2
140,729	-		IAI47_19560	0.43	-0.9
140,729	-		IAI47_19560	0.43	+0.6
140,948	+		IAI47_19560	0.75	+0.7
140,948	+		IAI47_19560	0.75	-0.6
140,948	+		IAI47_19560	0.75	-0.4
140,948	+		IAI47_19560	0.75	+0.5
140,948	+		IAI47_19560	0.75	+0.9
140,948	+		IAI47_19560	0.75	+0.8
140,948	+		IAI47_19560	0.75	+0.8
140,948	+		IAI47_19560	0.75	+0.9
140,949	-		IAI47_19560	0.76	-0.3
140,949	-		IAI47_19560	0.76	-0.7
140,949	-		IAI47_19560	0.76	+1.1
140,949	-		IAI47_19560	0.76	-0.8
140,949	-		IAI47_19560	0.76	+2.3
140,951	+		IAI47_19560	0.76	+1.8
140,963	+		IAI47_19560	0.78	-0.2
140,964	-		IAI47_19560	0.78	+0.3
140,964	-		IAI47_19560	0.78	+0.3
140,975	+		IAI47_19560	0.79	+2.3
140,976	-		IAI47_19560	0.80	-1.6
140,976	-		IAI47_19560	0.80	+0.8
140,976	-		IAI47_19560	0.80	+0.8
140,976	-		IAI47_19560	0.80	+0.9
140,991	+		IAI47_19560	0.82	-0.7
140,991	+		IAI47_19560	0.82	-1.5
140,995	+		IAI47_19560	0.82	+1.0
140,996	-		IAI47_19560	0.83	-0.5
140,996	-		IAI47_19560	0.83	-0.2
140,996	-		IAI47_19560	0.83	+1.5
140,996	-		IAI47_19560	0.83	+0.8
141,023	-		IAI47_19560	0.86	+1.2
141,048	+				+0.7
141,112	+				-0.2
141,129	+				-0.2
141,129	+				+1.9
141,129	+				+1.1
141,129	+				-0.5
141,130	-				-0.2
141,130	-				-1.2
141,130	-				-1.0
141,130	-				-1.9
141,219	+				-0.8
141,235	+				+0.1
141,236	-				-1.2
141,283	-				+1.4
141,286	+				+0.2
141,308	+				+0.5
141,308	+				+1.1
141,308	+				-0.2
141,309	-				+0.2
141,309	-				-1.5
141,310	+				+0.3
141,310	+				+0.8
141,310	+				-1.4
141,310	+				+0.2
141,310	+				+0.7
141,311	-				+1.3
141,311	-				+0.1
141,323	-				+1.8
141,325	+				-0.1
141,347	+				+1.4
141,392	+				+0.6
141,392	+				+3.4
141,392	+				+0.8
141,413	+				+0.4
141,492	+				+2.1
141,496	+				+1.7
141,496	+				+2.1
141,502	+				-0.1
141,526	+				+2.0
141,533	+				+1.5
141,543	+				+2.0
141,543	+				+1.3
141,543	+				+1.5
141,543	+				+0.7
141,546	+				+1.9
141,546	+				+2.1
141,550	+				+2.3
141,550	+				+1.3
141,560	+				+1.6
141,588	+				+0.3
141,601	+				-0.9
141,601	+				+1.0
141,616	+				+2.6
141,616	+				+0.2
141,667	+				+1.2
141,667	+				+0.2
141,669	+				+2.4
141,669	+				+0.4
141,671	+				+3.5
141,671	+				+1.2
141,695	+				+1.2
141,695	+				+0.2
141,731	+				+1.4
141,757	+				-0.9
141,783	+				+1.3
141,783	+				+0.3
141,809	+				+1.7
141,809	+				+1.6
141,827	-				+0.5
141,870	+				+2.3
141,875	+				-0.3
141,913	+				-0.3
141,913	+				-0.2
141,913	+				-1.9
141,941	+				+1.0
141,954	+				-1.0
141,954	+				-0.3
141,954	+				+1.3
141,955	-				+0.1
141,955	-				+1.0
141,955	-				+1.3
141,971	+				-0.7
141,971	+				+1.1
141,972	-				-0.1
141,998	-				-0.4
142,011	+				-0.2
142,011	+				+0.1
142,011	+				+0.2
142,012	-				+1.5
142,012	-				-0.1
142,070	+				+1.3
142,108	-				+0.9