Strain Fitness in Pantoea sp. MT58 around IAI47_12340

Experiment: Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50
2,607,134	+		IAI47_12335	0.57	-0.1
2,607,134	+		IAI47_12335	0.57	+0.5
2,607,135	-		IAI47_12335	0.57	-0.4
2,607,148	+		IAI47_12335	0.58	+0.6
2,607,148	+		IAI47_12335	0.58	-0.4
2,607,148	+		IAI47_12335	0.58	-0.5
2,607,149	-		IAI47_12335	0.58	+0.9
2,607,149	-		IAI47_12335	0.58	-0.6
2,607,149	-		IAI47_12335	0.58	+1.6
2,607,151	+		IAI47_12335	0.58	-1.3
2,607,151	+		IAI47_12335	0.58	-0.6
2,607,151	+		IAI47_12335	0.58	-1.7
2,607,151	+		IAI47_12335	0.58	-0.7
2,607,151	+		IAI47_12335	0.58	-0.7
2,607,151	+		IAI47_12335	0.58	+0.4
2,607,152	-		IAI47_12335	0.58	+0.0
2,607,152	-		IAI47_12335	0.58	-0.9
2,607,152	-		IAI47_12335	0.58	+1.3
2,607,152	-		IAI47_12335	0.58	+2.0
2,607,152	-		IAI47_12335	0.58	+0.0
2,607,152	-		IAI47_12335	0.58	+0.1
2,607,152	-		IAI47_12335	0.58	-0.3
2,607,152	-		IAI47_12335	0.58	-0.5
2,607,152	-		IAI47_12335	0.58	+2.3
2,607,160	+		IAI47_12335	0.58	+0.1
2,607,161	-		IAI47_12335	0.58	-0.7
2,607,161	-		IAI47_12335	0.58	+0.9
2,607,161	-		IAI47_12335	0.58	+0.5
2,607,182	+		IAI47_12335	0.59	+0.1
2,607,183	-		IAI47_12335	0.59	-0.4
2,607,183	-		IAI47_12335	0.59	+0.8
2,607,183	-		IAI47_12335	0.59	-0.6
2,607,183	-		IAI47_12335	0.59	-0.9
2,607,345	+		IAI47_12335	0.66	-0.7
2,607,345	+		IAI47_12335	0.66	+0.3
2,607,345	+		IAI47_12335	0.66	+0.6
2,607,346	-		IAI47_12335	0.66	+0.8
2,607,346	-		IAI47_12335	0.66	+0.0
2,607,362	+		IAI47_12335	0.67	-1.2
2,607,362	+		IAI47_12335	0.67	+0.4
2,607,362	+		IAI47_12335	0.67	+1.7
2,607,363	-		IAI47_12335	0.67	+0.9
2,607,363	-		IAI47_12335	0.67	+1.9
2,607,363	-		IAI47_12335	0.67	+1.6
2,607,363	-		IAI47_12335	0.67	+3.1
2,607,449	+		IAI47_12335	0.71	+0.9
2,607,449	+		IAI47_12335	0.71	+0.3
2,607,449	+		IAI47_12335	0.71	+0.6
2,607,450	-		IAI47_12335	0.71	-0.1
2,607,450	-		IAI47_12335	0.71	-0.2
2,607,503	+		IAI47_12335	0.73	+0.8
2,607,504	-		IAI47_12335	0.73	+1.3
2,607,541	+		IAI47_12335	0.75	-2.7
2,607,542	-		IAI47_12335	0.75	-2.5
2,607,542	-		IAI47_12335	0.75	-0.3
2,607,543	-		IAI47_12335	0.75	+1.1
2,607,551	+		IAI47_12335	0.75	+0.6
2,607,567	+		IAI47_12335	0.76	-1.4
2,607,596	+		IAI47_12335	0.77	-0.5
2,607,596	+		IAI47_12335	0.77	+0.5
2,607,596	+		IAI47_12335	0.77	-0.7
2,607,597	-		IAI47_12335	0.77	+0.4
2,607,597	-		IAI47_12335	0.77	-0.7
2,607,597	-		IAI47_12335	0.77	+2.7
2,607,953	+				+1.5
2,607,953	+				+1.1
2,607,953	+				-0.3
2,607,953	+				-0.6
2,607,954	-				+0.2
2,607,954	-				-1.1
2,607,954	-				+0.8
2,607,966	+				+1.2
2,608,147	+				-0.9
2,608,147	-				+0.4
2,608,148	-				-1.2
2,608,148	-				+0.9
2,608,173	+		IAI47_12340	0.10	-0.7
2,608,173	+		IAI47_12340	0.10	-1.2
2,608,173	+		IAI47_12340	0.10	-0.3
2,608,173	+		IAI47_12340	0.10	-0.7
2,608,194	+		IAI47_12340	0.14	+0.0
2,608,206	+		IAI47_12340	0.16	+0.2
2,608,206	+		IAI47_12340	0.16	-0.9
2,608,206	+		IAI47_12340	0.16	+1.3
2,608,206	+		IAI47_12340	0.16	+0.2
2,608,207	-		IAI47_12340	0.16	-0.4
2,608,207	-		IAI47_12340	0.16	-1.2
2,608,207	-		IAI47_12340	0.16	+0.9
2,608,235	+		IAI47_12340	0.20	-1.0
2,608,236	+		IAI47_12340	0.21	+0.4
2,608,236	+		IAI47_12340	0.21	-1.6
2,608,236	+		IAI47_12340	0.21	-0.7
2,608,236	+		IAI47_12340	0.21	-1.4
2,608,236	+		IAI47_12340	0.21	+0.4
2,608,236	+		IAI47_12340	0.21	-1.2
2,608,236	+		IAI47_12340	0.21	-0.5
2,608,236	+		IAI47_12340	0.21	+0.7
2,608,236	+		IAI47_12340	0.21	+0.0
2,608,236	+		IAI47_12340	0.21	+0.2
2,608,236	+		IAI47_12340	0.21	+0.7
2,608,237	-		IAI47_12340	0.21	-0.3
2,608,237	-		IAI47_12340	0.21	+0.5
2,608,237	-		IAI47_12340	0.21	+0.5
2,608,254	+		IAI47_12340	0.23	+0.4
2,608,254	+		IAI47_12340	0.23	-0.6
2,608,254	+		IAI47_12340	0.23	-0.4
2,608,254	+		IAI47_12340	0.23	+0.1
2,608,254	+		IAI47_12340	0.23	+0.6
2,608,255	-		IAI47_12340	0.24	+0.8
2,608,255	-		IAI47_12340	0.24	-2.0
2,608,476	+		IAI47_12340	0.60	-0.6
2,608,476	+		IAI47_12340	0.60	-1.8
2,608,476	+		IAI47_12340	0.60	-1.1
2,608,476	+		IAI47_12340	0.60	+0.1
2,608,581	+		IAI47_12340	0.77	-1.8
2,608,582	-		IAI47_12340	0.77	+1.6
2,608,606	-		IAI47_12340	0.81	-0.7
2,608,690	+				+0.5
2,608,690	+				-0.3
2,608,690	+				-1.8
2,608,691	-				+0.4
2,608,691	-				+1.1
2,608,691	-				-0.6
2,608,709	-				+0.6
2,608,726	-				-0.2
2,608,731	+				+0.8
2,608,744	-				+0.1
2,608,749	-				-1.4
2,608,805	+		IAI47_12345	0.22	+1.0
2,608,805	+		IAI47_12345	0.22	-1.1
2,608,805	+		IAI47_12345	0.22	+0.9
2,608,805	+		IAI47_12345	0.22	+1.2
2,608,806	-		IAI47_12345	0.22	+1.8
2,608,806	-		IAI47_12345	0.22	-0.7
2,608,815	-		IAI47_12345	0.25	+1.1
2,608,849	+		IAI47_12345	0.33	-0.4
2,608,874	-		IAI47_12345	0.39	+0.1
2,608,874	-		IAI47_12345	0.39	-0.5
2,608,874	-		IAI47_12345	0.39	-0.6
2,608,880	+		IAI47_12345	0.40	+0.2
2,608,880	+		IAI47_12345	0.40	-0.5
2,608,930	+		IAI47_12345	0.52	+1.6
2,608,930	+		IAI47_12345	0.52	-0.4
2,608,930	+		IAI47_12345	0.52	-1.3
2,608,931	-		IAI47_12345	0.53	-0.2
2,608,931	-		IAI47_12345	0.53	+1.0
2,608,963	+		IAI47_12345	0.60	+0.6
2,608,964	-		IAI47_12345	0.61	+1.0
2,608,964	-		IAI47_12345	0.61	+0.3
2,608,987	+		IAI47_12345	0.66	-0.3
2,608,988	-		IAI47_12345	0.66	-1.1
2,608,988	-		IAI47_12345	0.66	+0.0
2,608,988	-		IAI47_12345	0.66	+0.2
2,608,988	-		IAI47_12345	0.66	+0.1
2,608,988	-		IAI47_12345	0.66	-0.2
2,608,988	-		IAI47_12345	0.66	+0.3
2,608,993	+		IAI47_12345	0.68	-1.4
2,608,993	+		IAI47_12345	0.68	-2.3
2,608,993	+		IAI47_12345	0.68	-0.5
2,608,994	-		IAI47_12345	0.68	+1.2
2,608,994	-		IAI47_12345	0.68	+2.2
2,608,994	-		IAI47_12345	0.68	-1.7
2,608,994	-		IAI47_12345	0.68	-0.4
2,608,994	-		IAI47_12345	0.68	-1.3
2,608,994	-		IAI47_12345	0.68	+2.4
2,608,994	-		IAI47_12345	0.68	-0.4
2,608,994	-		IAI47_12345	0.68	+0.1
2,608,994	-		IAI47_12345	0.68	-1.5
2,609,044	+		IAI47_12345	0.80	+1.2
2,609,045	-		IAI47_12345	0.80	+0.6
2,609,048	+		IAI47_12345	0.81	-1.0
2,609,048	+		IAI47_12345	0.81	-1.9
2,609,048	+		IAI47_12345	0.81	-0.4
2,609,049	-		IAI47_12345	0.81	-1.0
2,609,049	-		IAI47_12345	0.81	-1.0
2,609,213	+				-0.3
2,609,213	+				-1.5
2,609,214	-				+2.6
2,609,234	+				-0.9
2,609,234	+				+1.5
2,609,234	+				+0.2
2,609,235	-				-2.0
2,609,316	+		IAI47_12350	0.12	-0.6
2,609,326	-		IAI47_12350	0.12	-0.9
2,609,369	-		IAI47_12350	0.15	+2.0
2,609,369	-		IAI47_12350	0.15	+1.3
2,609,475	+		IAI47_12350	0.21	-0.6
2,609,592	+		IAI47_12350	0.28	+0.7
2,609,593	-		IAI47_12350	0.28	-0.5
2,609,593	-		IAI47_12350	0.28	+0.3
2,609,631	+		IAI47_12350	0.30	-0.5
2,609,647	-		IAI47_12350	0.31	-1.0
2,609,647	-		IAI47_12350	0.31	+1.9