Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c31310

Experiment: Glycine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glycine (C)
3,270,032	-		PGA1_c31300	0.25	-0.7
3,270,039	-		PGA1_c31300	0.26	+0.9
3,270,090	+		PGA1_c31300	0.30	+1.4
3,270,108	-		PGA1_c31300	0.32	+0.5
3,270,108	-		PGA1_c31300	0.32	+1.7
3,270,121	+		PGA1_c31300	0.33	-0.5
3,270,129	-		PGA1_c31300	0.34	-0.2
3,270,185	-		PGA1_c31300	0.39	+0.5
3,270,206	-		PGA1_c31300	0.41	-0.6
3,270,215	-		PGA1_c31300	0.42	-0.2
3,270,236	+		PGA1_c31300	0.43	+0.9
3,270,266	+		PGA1_c31300	0.46	-0.2
3,270,268	-		PGA1_c31300	0.46	+0.4
3,270,336	+		PGA1_c31300	0.52	+1.5
3,270,423	-		PGA1_c31300	0.60	+0.7
3,270,481	+		PGA1_c31300	0.65	-1.1
3,270,495	+		PGA1_c31300	0.67	-0.4
3,270,516	-		PGA1_c31300	0.69	-0.9
3,270,525	+		PGA1_c31300	0.69	-0.9
3,270,533	-		PGA1_c31300	0.70	+0.5
3,270,537	+		PGA1_c31300	0.70	+0.2
3,270,546	+		PGA1_c31300	0.71	-0.7
3,270,546	+		PGA1_c31300	0.71	+0.2
3,270,546	+		PGA1_c31300	0.71	-0.2
3,270,546	+		PGA1_c31300	0.71	+0.1
3,270,554	-		PGA1_c31300	0.72	-0.0
3,270,554	-		PGA1_c31300	0.72	-0.3
3,270,554	-		PGA1_c31300	0.72	-0.3
3,270,554	-		PGA1_c31300	0.72	+0.8
3,270,554	-		PGA1_c31300	0.72	-0.4
3,270,582	+		PGA1_c31300	0.74	-0.1
3,270,582	+		PGA1_c31300	0.74	-1.1
3,270,590	-		PGA1_c31300	0.75	+0.9
3,270,590	-		PGA1_c31300	0.75	+0.1
3,270,671	+		PGA1_c31300	0.82	-1.6
3,270,676	+		PGA1_c31300	0.83	+0.5
3,270,679	-		PGA1_c31300	0.83	+0.7
3,270,691	-		PGA1_c31300	0.84	+0.2
3,270,702	+		PGA1_c31300	0.85	-0.1
3,270,704	+		PGA1_c31300	0.85	-1.1
3,270,710	-		PGA1_c31300	0.86	+0.2
3,270,712	-		PGA1_c31300	0.86	-0.0
3,270,712	-		PGA1_c31300	0.86	-0.1
3,270,747	-		PGA1_c31300	0.89	-0.1
3,270,825	+				+0.2
3,270,833	-				+0.2
3,270,841	+				+0.6
3,270,853	+				+0.6
3,270,853	+				+0.2
3,270,858	+				+0.2
3,270,861	-				+0.0
3,270,861	-				+0.1
3,270,861	-				-0.3
3,270,861	-				+0.2
3,270,863	+				+0.3
3,270,863	+				-0.3
3,270,863	+				-0.3
3,270,863	+				-0.0
3,270,863	+				+0.6
3,270,866	-				-0.2
3,270,871	-				+0.7
3,270,877	-				+0.6
3,270,908	-				-0.4
3,270,995	+				-1.3
3,271,026	+				+0.2
3,271,026	+				+0.5
3,271,026	+				+0.3
3,271,026	+				-0.2
3,271,026	+				-0.5
3,271,034	-				+0.8
3,271,073	+				+0.0
3,271,075	-				-1.5
3,271,081	-				-0.3
3,271,083	+				-0.4
3,271,083	+				-0.2
3,271,091	-				-0.5
3,271,091	-				-1.2
3,271,091	-				+0.4
3,271,091	-				+0.6
3,271,091	-				-0.6
3,271,124	-				+1.0
3,271,124	-				+0.7
3,271,175	-		PGA1_c31310	0.14	-0.2
3,271,253	+		PGA1_c31310	0.21	-0.2
3,271,256	-		PGA1_c31310	0.21	+0.0
3,271,294	+		PGA1_c31310	0.24	-0.9
3,271,302	-		PGA1_c31310	0.25	-1.4
3,271,307	-		PGA1_c31310	0.26	+0.3
3,271,307	-		PGA1_c31310	0.26	-0.5
3,271,307	-		PGA1_c31310	0.26	-0.5
3,271,321	-		PGA1_c31310	0.27	+0.2
3,271,342	-		PGA1_c31310	0.29	-0.2
3,271,377	+		PGA1_c31310	0.32	+0.0
3,271,385	-		PGA1_c31310	0.33	+0.8
3,271,385	-		PGA1_c31310	0.33	-0.3
3,271,385	-		PGA1_c31310	0.33	-1.4
3,271,393	+		PGA1_c31310	0.33	-0.6
3,271,429	+		PGA1_c31310	0.36	+0.0
3,271,448	-		PGA1_c31310	0.38	-0.2
3,271,448	-		PGA1_c31310	0.38	+0.2
3,271,501	-		PGA1_c31310	0.43	-0.4
3,271,501	-		PGA1_c31310	0.43	-1.3
3,271,542	-		PGA1_c31310	0.46	-1.2
3,271,574	+		PGA1_c31310	0.49	+0.4
3,271,582	-		PGA1_c31310	0.50	+0.1
3,271,582	-		PGA1_c31310	0.50	-1.1
3,271,582	-		PGA1_c31310	0.50	-0.9
3,271,584	+		PGA1_c31310	0.50	+0.1
3,271,610	+		PGA1_c31310	0.53	+0.2
3,271,616	+		PGA1_c31310	0.53	-0.5
3,271,637	+		PGA1_c31310	0.55	-0.0
3,271,638	+		PGA1_c31310	0.55	-0.2
3,271,645	-		PGA1_c31310	0.56	-0.2
3,271,650	+		PGA1_c31310	0.56	-0.3
3,271,657	-		PGA1_c31310	0.57	-1.5
3,271,658	-		PGA1_c31310	0.57	-0.2
3,271,658	-		PGA1_c31310	0.57	-1.5
3,271,698	+		PGA1_c31310	0.60	-0.1
3,271,700	-		PGA1_c31310	0.61	-0.1
3,271,706	-		PGA1_c31310	0.61	+0.6
3,271,706	-		PGA1_c31310	0.61	-0.2
3,271,713	-		PGA1_c31310	0.62	+0.3
3,271,793	-		PGA1_c31310	0.69	-2.7
3,271,803	+		PGA1_c31310	0.70	+0.8
3,271,809	+		PGA1_c31310	0.70	-0.6
3,271,835	-		PGA1_c31310	0.73	+0.1
3,271,835	-		PGA1_c31310	0.73	+0.6
3,271,836	-		PGA1_c31310	0.73	-1.0
3,271,837	+		PGA1_c31310	0.73	+0.5
3,271,873	-		PGA1_c31310	0.76	-0.7
3,271,892	+		PGA1_c31310	0.78	+0.5
3,271,892	+		PGA1_c31310	0.78	-0.3
3,271,892	+		PGA1_c31310	0.78	-1.1
3,271,893	+		PGA1_c31310	0.78	-1.2
3,271,894	-		PGA1_c31310	0.78	-0.5
3,271,900	-		PGA1_c31310	0.78	+0.1
3,271,901	-		PGA1_c31310	0.78	-0.1
3,271,908	+		PGA1_c31310	0.79	-0.0
3,271,908	+		PGA1_c31310	0.79	-1.4
3,271,908	+		PGA1_c31310	0.79	-0.4
3,271,908	+		PGA1_c31310	0.79	-0.1
3,271,916	-		PGA1_c31310	0.80	-0.8
3,271,916	-		PGA1_c31310	0.80	-0.8
3,271,939	+		PGA1_c31310	0.82	+0.0
3,271,947	-		PGA1_c31310	0.82	+0.5
3,271,947	-		PGA1_c31310	0.82	-0.1
3,271,948	-		PGA1_c31310	0.83	-2.0
3,271,948	-		PGA1_c31310	0.83	-0.5
3,272,028	+		PGA1_c31310	0.90	-0.5
3,272,038	+				+0.1
3,272,046	-				-0.3
3,272,051	-				-0.6
3,272,077	-				-0.1
3,272,105	-				-1.7
3,272,124	+				+1.1
3,272,124	+				-0.7
3,272,124	+				-0.3
3,272,124	+				+0.2
3,272,124	+				-0.3
3,272,124	+				-1.5
3,272,124	+				+0.2
3,272,124	+				-0.2
3,272,131	+				-0.6
3,272,132	-				-0.1
3,272,132	-				-0.8
3,272,132	-				+1.1
3,272,132	-				+0.3
3,272,132	-				-0.2
3,272,132	-				-0.5
3,272,132	-				+1.0
3,272,132	-				+0.0
3,272,141	+				+1.2
3,272,141	+				-0.9
3,272,141	+				+0.5
3,272,147	+				+0.8
3,272,155	-				+0.3
3,272,157	+				-0.1
3,272,159	+				+0.9
3,272,173	-				-0.4
3,272,194	+				-0.0
3,272,199	+				+0.8
3,272,202	-				-1.0
3,272,202	-				-1.7
3,272,204	+				-0.0
3,272,216	+				-0.1
3,272,216	+				+0.2
3,272,217	-				+0.2
3,272,217	-				-0.7
3,272,224	-				+0.7
3,272,251	+				-0.1
3,272,251	+				-0.5
3,272,251	+				-1.2
3,272,251	+				+0.1
3,272,251	+				-0.4
3,272,251	+				+0.8
3,272,259	-				+0.6
3,272,259	-				+0.2
3,272,259	-				-0.7
3,272,259	-				-1.8
3,272,259	-				-0.2
3,272,259	-				-0.3
3,272,259	-				-0.8
3,272,259	-				+0.1
3,272,310	+				-0.0
3,272,318	-				-0.0
3,272,353	+				-0.1
3,272,353	+				-0.6
3,272,363	+				-0.9
3,272,371	-				+0.5
3,272,394	+				+0.1
3,272,401	+				+0.7
3,272,401	+				-0.0
3,272,409	+				-0.1
3,272,409	+				+0.2
3,272,409	+				+0.2
3,272,477	-				+0.6
3,272,488	+				+0.2
3,272,498	+				-0.3
3,272,498	+				+0.2
3,272,506	-				-1.4
3,272,558	-		PGA1_c31320	0.13	+0.3
3,272,591	+		PGA1_c31320	0.17	-0.1
3,272,599	-		PGA1_c31320	0.18	+1.2
3,272,628	+		PGA1_c31320	0.21	+0.5
3,272,628	+		PGA1_c31320	0.21	+0.7
3,272,630	-		PGA1_c31320	0.22	-0.5
3,272,630	-		PGA1_c31320	0.22	+0.1
3,272,641	+		PGA1_c31320	0.23	+0.2
3,272,654	-		PGA1_c31320	0.24	+0.3
3,272,671	+		PGA1_c31320	0.26	-1.0
3,272,673	+		PGA1_c31320	0.27	+0.4
3,272,681	-		PGA1_c31320	0.28	-0.6
3,272,720	+		PGA1_c31320	0.32	-1.1
3,272,756	+		PGA1_c31320	0.37	+0.3
3,272,756	+		PGA1_c31320	0.37	+0.1
3,272,764	-		PGA1_c31320	0.38	-0.4
3,272,790	+		PGA1_c31320	0.41	+0.1
3,272,790	+		PGA1_c31320	0.41	-0.2
3,272,790	+		PGA1_c31320	0.41	-0.4
3,272,790	+		PGA1_c31320	0.41	+0.6
3,272,791	-		PGA1_c31320	0.41	+0.9
3,272,798	-		PGA1_c31320	0.42	+0.2
3,272,798	-		PGA1_c31320	0.42	+0.9
3,272,798	-		PGA1_c31320	0.42	-2.5
3,272,837	+		PGA1_c31320	0.46	-0.3
3,272,854	+		PGA1_c31320	0.48	+0.7
3,272,854	+		PGA1_c31320	0.48	-0.6
3,272,854	+		PGA1_c31320	0.48	+0.3
3,272,854	+		PGA1_c31320	0.48	+0.7
3,272,862	-		PGA1_c31320	0.49	+0.5
3,272,889	+		PGA1_c31320	0.52	+0.0
3,272,897	-		PGA1_c31320	0.53	-0.3
3,272,897	-		PGA1_c31320	0.53	+0.4
3,272,907	-		PGA1_c31320	0.55	+0.1
3,272,907	-		PGA1_c31320	0.55	-0.6
3,272,938	-		PGA1_c31320	0.58	-0.4
3,272,944	-		PGA1_c31320	0.59	-0.2
3,272,953	-		PGA1_c31320	0.60	-0.0
3,272,983	+		PGA1_c31320	0.64	-0.7
3,273,015	+		PGA1_c31320	0.67	-0.1
3,273,023	-		PGA1_c31320	0.68	-0.0
3,273,045	+		PGA1_c31320	0.71	+0.6
3,273,048	+		PGA1_c31320	0.71	+0.6
3,273,053	-		PGA1_c31320	0.72	-0.2
3,273,056	+		PGA1_c31320	0.72	-0.4
3,273,107	-		PGA1_c31320	0.78	+0.6
3,273,107	-		PGA1_c31320	0.78	-0.1
3,273,107	-		PGA1_c31320	0.78	+0.7
3,273,112	-		PGA1_c31320	0.79	-1.3
3,273,112	-		PGA1_c31320	0.79	-0.9