Experiment: Ammonium chloride (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1751 and DvMF_1752 are separated by 303 nucleotides DvMF_1752 and DvMF_1753 are separated by 453 nucleotides DvMF_1753 and DvMF_1754 are separated by 140 nucleotides
DvMF_1751: DvMF_1751 - fructose-bisphosphate aldolase (RefSeq), at 2,139,616 to 2,140,413
_1751
DvMF_1752: DvMF_1752 - hypothetical protein (RefSeq), at 2,140,717 to 2,140,821
_1752
DvMF_1753: DvMF_1753 - hypothetical protein (RefSeq), at 2,141,275 to 2,141,832
_1753
DvMF_1754: DvMF_1754 - diguanylate phosphodiesterase (RefSeq), at 2,141,973 to 2,143,268
_1754
Position (kb)
2141
2142 Strain fitness (log2 ratio)
-1
0
1 at 2140.831 kb on + strand at 2140.839 kb on - strand at 2140.839 kb on - strand at 2141.194 kb on + strand at 2141.277 kb on + strand at 2141.285 kb on - strand at 2141.295 kb on - strand at 2141.295 kb on - strand at 2141.338 kb on + strand, within DvMF_1753 at 2141.393 kb on + strand, within DvMF_1753 at 2141.408 kb on + strand, within DvMF_1753 at 2141.500 kb on + strand, within DvMF_1753 at 2141.500 kb on + strand, within DvMF_1753 at 2141.500 kb on + strand, within DvMF_1753 at 2141.500 kb on + strand, within DvMF_1753 at 2141.508 kb on - strand, within DvMF_1753 at 2141.768 kb on - strand, within DvMF_1753 at 2142.337 kb on + strand, within DvMF_1754 at 2142.346 kb on + strand, within DvMF_1754
Per-strain Table
Position Strand Gene LocusTag Fraction Ammonium chloride (N) remove 2,140,831 + -1.3 2,140,839 - -0.4 2,140,839 - -0.9 2,141,194 + -0.7 2,141,277 + -0.5 2,141,285 - +0.0 2,141,295 - -0.4 2,141,295 - -0.6 2,141,338 + DvMF_1753 0.11 -0.7 2,141,393 + DvMF_1753 0.21 -0.3 2,141,408 + DvMF_1753 0.24 -0.1 2,141,500 + DvMF_1753 0.40 -0.2 2,141,500 + DvMF_1753 0.40 -0.1 2,141,500 + DvMF_1753 0.40 -0.3 2,141,500 + DvMF_1753 0.40 -0.2 2,141,508 - DvMF_1753 0.42 +0.1 2,141,768 - DvMF_1753 0.88 -0.3 2,142,337 + DvMF_1754 0.28 -0.7 2,142,346 + DvMF_1754 0.29 -0.7
Or see this region's nucleotide sequence