Experiment: Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI47_04315 and IAI47_04320 are separated by 282 nucleotides IAI47_04320 and IAI47_04325 are separated by 8 nucleotides IAI47_04325 and IAI47_04330 are separated by 84 nucleotides IAI47_04330 and IAI47_04335 are separated by 71 nucleotides IAI47_04335 and IAI47_04340 are separated by 452 nucleotides
IAI47_04315: IAI47_04315 - carbon storage regulator CsrA, at 910,366 to 910,551
_04315
IAI47_04320: IAI47_04320 - tRNA-Ser, at 910,834 to 910,926
_04320
IAI47_04325: IAI47_04325 - tRNA-Arg, at 910,935 to 911,011
_04325
IAI47_04330: IAI47_04330 - tRNA-Arg, at 911,096 to 911,172
_04330
IAI47_04335: IAI47_04335 - tRNA-Arg, at 911,244 to 911,320
_04335
IAI47_04340: IAI47_04340 - fructose-1-phosphate/6-phosphogluconate phosphatase, at 911,773 to 912,339
_04340
Position (kb) 911
912 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 910.249 kb on + strand at 910.249 kb on + strand at 910.250 kb on - strand at 910.275 kb on + strand at 910.275 kb on + strand at 910.276 kb on - strand at 910.284 kb on + strand at 910.284 kb on + strand at 910.284 kb on + strand at 910.285 kb on - strand at 910.301 kb on + strand at 910.301 kb on + strand at 910.312 kb on + strand at 910.328 kb on + strand at 910.345 kb on + strand at 910.637 kb on + strand at 910.637 kb on + strand at 910.638 kb on - strand at 910.638 kb on - strand at 910.638 kb on - strand at 910.638 kb on - strand at 910.642 kb on - strand at 910.642 kb on - strand at 910.642 kb on - strand at 910.666 kb on + strand at 910.666 kb on + strand at 910.666 kb on + strand at 910.666 kb on + strand at 910.667 kb on - strand at 910.667 kb on - strand at 910.667 kb on - strand at 911.027 kb on + strand at 911.027 kb on + strand at 911.037 kb on + strand at 911.037 kb on + strand at 911.037 kb on + strand at 911.059 kb on + strand at 911.059 kb on + strand at 911.059 kb on + strand at 911.059 kb on + strand at 911.059 kb on + strand at 911.059 kb on + strand at 911.063 kb on + strand at 911.063 kb on + strand at 911.063 kb on + strand at 911.078 kb on + strand at 911.087 kb on + strand at 911.087 kb on + strand at 911.093 kb on + strand at 911.093 kb on + strand at 911.093 kb on + strand at 911.093 kb on + strand at 911.093 kb on + strand at 911.093 kb on + strand at 911.180 kb on + strand at 911.180 kb on + strand at 911.181 kb on - strand at 911.181 kb on - strand at 911.204 kb on + strand at 911.204 kb on + strand at 911.222 kb on - strand at 911.233 kb on + strand at 911.233 kb on + strand at 911.233 kb on + strand at 911.234 kb on - strand at 911.234 kb on - strand at 911.252 kb on - strand, within IAI47_04335 at 911.252 kb on - strand, within IAI47_04335 at 911.252 kb on - strand, within IAI47_04335 at 911.265 kb on - strand, within IAI47_04335 at 911.265 kb on - strand, within IAI47_04335 at 911.270 kb on - strand, within IAI47_04335 at 911.270 kb on - strand, within IAI47_04335 at 911.270 kb on - strand, within IAI47_04335 at 911.334 kb on + strand at 911.359 kb on - strand at 911.359 kb on - strand at 911.359 kb on - strand at 911.368 kb on + strand at 911.369 kb on - strand at 911.369 kb on - strand at 911.369 kb on - strand at 911.387 kb on + strand at 911.387 kb on + strand at 911.387 kb on + strand at 911.388 kb on - strand at 911.388 kb on - strand at 911.388 kb on - strand at 911.388 kb on - strand at 911.395 kb on + strand at 911.395 kb on + strand at 911.395 kb on + strand at 911.396 kb on - strand at 911.396 kb on - strand at 911.396 kb on - strand at 911.397 kb on + strand at 911.398 kb on - strand at 911.405 kb on - strand at 911.405 kb on - strand at 911.449 kb on - strand at 911.449 kb on - strand at 911.461 kb on + strand at 911.461 kb on + strand at 911.513 kb on + strand at 911.513 kb on + strand at 911.514 kb on - strand at 911.514 kb on - strand at 911.524 kb on + strand at 911.524 kb on + strand at 911.525 kb on - strand at 911.558 kb on + strand at 911.597 kb on + strand at 911.597 kb on + strand at 911.597 kb on + strand at 911.597 kb on + strand at 911.597 kb on + strand at 911.631 kb on - strand at 911.656 kb on + strand at 911.731 kb on - strand at 911.731 kb on - strand at 911.731 kb on - strand at 911.735 kb on + strand at 911.735 kb on + strand at 911.735 kb on + strand at 911.736 kb on - strand at 911.740 kb on + strand at 911.740 kb on + strand at 911.740 kb on + strand at 911.741 kb on - strand at 911.741 kb on - strand at 911.776 kb on + strand at 911.776 kb on + strand at 911.776 kb on + strand at 911.777 kb on - strand at 911.777 kb on - strand at 911.777 kb on - strand at 911.785 kb on + strand at 911.785 kb on + strand at 911.785 kb on + strand at 911.785 kb on + strand at 911.785 kb on + strand at 911.786 kb on - strand at 911.786 kb on - strand at 911.805 kb on + strand at 911.806 kb on - strand at 911.826 kb on + strand at 911.898 kb on + strand, within IAI47_04340 at 911.898 kb on + strand, within IAI47_04340 at 911.898 kb on + strand, within IAI47_04340 at 911.898 kb on + strand, within IAI47_04340 at 911.898 kb on + strand, within IAI47_04340 at 911.898 kb on + strand, within IAI47_04340 at 911.898 kb on + strand, within IAI47_04340 at 911.898 kb on + strand, within IAI47_04340 at 911.899 kb on - strand, within IAI47_04340 at 911.899 kb on - strand, within IAI47_04340 at 911.899 kb on - strand, within IAI47_04340 at 911.899 kb on - strand, within IAI47_04340 at 911.899 kb on - strand, within IAI47_04340 at 911.899 kb on - strand, within IAI47_04340 at 911.899 kb on - strand, within IAI47_04340 at 911.899 kb on - strand, within IAI47_04340 at 911.899 kb on - strand, within IAI47_04340 at 911.910 kb on + strand, within IAI47_04340 at 912.047 kb on + strand, within IAI47_04340 at 912.048 kb on - strand, within IAI47_04340 at 912.067 kb on + strand, within IAI47_04340 at 912.067 kb on + strand, within IAI47_04340 at 912.084 kb on + strand, within IAI47_04340 at 912.084 kb on + strand, within IAI47_04340 at 912.085 kb on - strand, within IAI47_04340 at 912.085 kb on - strand, within IAI47_04340 at 912.085 kb on - strand, within IAI47_04340 at 912.085 kb on - strand, within IAI47_04340 at 912.111 kb on + strand, within IAI47_04340 at 912.111 kb on + strand, within IAI47_04340 at 912.111 kb on + strand, within IAI47_04340 at 912.111 kb on + strand, within IAI47_04340 at 912.111 kb on + strand, within IAI47_04340 at 912.111 kb on + strand, within IAI47_04340 at 912.111 kb on + strand, within IAI47_04340 at 912.111 kb on + strand, within IAI47_04340 at 912.111 kb on + strand, within IAI47_04340 at 912.111 kb on + strand, within IAI47_04340 at 912.111 kb on + strand, within IAI47_04340 at 912.111 kb on + strand, within IAI47_04340 at 912.111 kb on + strand, within IAI47_04340 at 912.111 kb on + strand, within IAI47_04340 at 912.111 kb on + strand, within IAI47_04340 at 912.111 kb on + strand, within IAI47_04340 at 912.111 kb on + strand, within IAI47_04340 at 912.111 kb on + strand, within IAI47_04340 at 912.111 kb on + strand, within IAI47_04340 at 912.111 kb on + strand, within IAI47_04340 at 912.112 kb on - strand, within IAI47_04340 at 912.112 kb on - strand, within IAI47_04340 at 912.112 kb on - strand, within IAI47_04340 at 912.112 kb on - strand, within IAI47_04340 at 912.112 kb on - strand, within IAI47_04340 at 912.112 kb on - strand, within IAI47_04340 at 912.112 kb on - strand, within IAI47_04340 at 912.112 kb on - strand, within IAI47_04340 at 912.112 kb on - strand, within IAI47_04340 at 912.112 kb on - strand, within IAI47_04340 at 912.112 kb on - strand, within IAI47_04340 at 912.112 kb on - strand, within IAI47_04340 at 912.112 kb on - strand, within IAI47_04340 at 912.112 kb on - strand, within IAI47_04340 at 912.112 kb on - strand, within IAI47_04340 at 912.112 kb on - strand, within IAI47_04340 at 912.128 kb on + strand, within IAI47_04340 at 912.185 kb on + strand, within IAI47_04340 at 912.185 kb on + strand, within IAI47_04340 at 912.185 kb on + strand, within IAI47_04340 at 912.185 kb on + strand, within IAI47_04340 at 912.185 kb on + strand, within IAI47_04340 at 912.186 kb on - strand, within IAI47_04340 at 912.186 kb on - strand, within IAI47_04340 at 912.186 kb on - strand, within IAI47_04340 at 912.186 kb on - strand, within IAI47_04340 at 912.186 kb on - strand, within IAI47_04340 at 912.186 kb on - strand, within IAI47_04340 at 912.186 kb on - strand, within IAI47_04340 at 912.186 kb on - strand, within IAI47_04340 at 912.195 kb on + strand, within IAI47_04340 at 912.196 kb on - strand, within IAI47_04340 at 912.196 kb on - strand, within IAI47_04340 at 912.196 kb on - strand, within IAI47_04340 at 912.286 kb on - strand at 912.286 kb on - strand at 912.297 kb on + strand at 912.298 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 remove 910,249 + -1.7 910,249 + +1.0 910,250 - -0.4 910,275 + -0.1 910,275 + -0.7 910,276 - +1.5 910,284 + -0.4 910,284 + -0.2 910,284 + -1.5 910,285 - -0.0 910,301 + +0.1 910,301 + -0.9 910,312 + -0.7 910,328 + +1.6 910,345 + +2.7 910,637 + -0.1 910,637 + -1.2 910,638 - -1.4 910,638 - -0.2 910,638 - +1.2 910,638 - +1.4 910,642 - +1.1 910,642 - -2.3 910,642 - +0.3 910,666 + +0.2 910,666 + -0.7 910,666 + -1.0 910,666 + +0.6 910,667 - -0.1 910,667 - +1.6 910,667 - +0.7 911,027 + +2.6 911,027 + +4.4 911,037 + +2.6 911,037 + -1.5 911,037 + +0.1 911,059 + +0.2 911,059 + +2.0 911,059 + +1.1 911,059 + +1.9 911,059 + +1.8 911,059 + -0.3 911,063 + -0.8 911,063 + +0.9 911,063 + -1.7 911,078 + -0.1 911,087 + -0.5 911,087 + +0.8 911,093 + -0.5 911,093 + +0.5 911,093 + +0.5 911,093 + -0.9 911,093 + +0.1 911,093 + -0.5 911,180 + +1.2 911,180 + -0.0 911,181 - -0.9 911,181 - -0.6 911,204 + +0.4 911,204 + +0.3 911,222 - -0.7 911,233 + +1.0 911,233 + +0.6 911,233 + -0.4 911,234 - -0.9 911,234 - -1.1 911,252 - IAI47_04335 0.10 -2.9 911,252 - IAI47_04335 0.10 -1.5 911,252 - IAI47_04335 0.10 -1.6 911,265 - IAI47_04335 0.27 -0.8 911,265 - IAI47_04335 0.27 -0.5 911,270 - IAI47_04335 0.34 +0.5 911,270 - IAI47_04335 0.34 +0.8 911,270 - IAI47_04335 0.34 -1.2 911,334 + +1.5 911,359 - -1.8 911,359 - +1.0 911,359 - -3.6 911,368 + -0.9 911,369 - -0.6 911,369 - -1.5 911,369 - -0.1 911,387 + -0.2 911,387 + +1.1 911,387 + -0.9 911,388 - +1.2 911,388 - +0.6 911,388 - -0.1 911,388 - +0.4 911,395 + -0.8 911,395 + +0.6 911,395 + -0.4 911,396 - -1.2 911,396 - -0.7 911,396 - -0.4 911,397 + +1.4 911,398 - -2.0 911,405 - +0.2 911,405 - +0.0 911,449 - -0.9 911,449 - +1.0 911,461 + -2.6 911,461 + -1.3 911,513 + -0.2 911,513 + +1.0 911,514 - +0.5 911,514 - -0.2 911,524 + +0.7 911,524 + -3.1 911,525 - -0.7 911,558 + -0.8 911,597 + -0.3 911,597 + -0.6 911,597 + -1.7 911,597 + -1.7 911,597 + +0.6 911,631 - +0.5 911,656 + +0.5 911,731 - +0.6 911,731 - -0.4 911,731 - -1.5 911,735 + -0.8 911,735 + +0.1 911,735 + -0.9 911,736 - +0.4 911,740 + +0.6 911,740 + -0.4 911,740 + -0.3 911,741 - +3.1 911,741 - -0.8 911,776 + -0.3 911,776 + -1.4 911,776 + -1.4 911,777 - +0.6 911,777 - -0.3 911,777 - +0.3 911,785 + +2.4 911,785 + +0.8 911,785 + +0.4 911,785 + -1.7 911,785 + -2.1 911,786 - +1.3 911,786 - +0.9 911,805 + +1.0 911,806 - -1.3 911,826 + -1.7 911,898 + IAI47_04340 0.22 -0.6 911,898 + IAI47_04340 0.22 -0.2 911,898 + IAI47_04340 0.22 -1.8 911,898 + IAI47_04340 0.22 -0.4 911,898 + IAI47_04340 0.22 +0.2 911,898 + IAI47_04340 0.22 -1.7 911,898 + IAI47_04340 0.22 +2.2 911,898 + IAI47_04340 0.22 +2.6 911,899 - IAI47_04340 0.22 +0.6 911,899 - IAI47_04340 0.22 -0.8 911,899 - IAI47_04340 0.22 +1.3 911,899 - IAI47_04340 0.22 -2.7 911,899 - IAI47_04340 0.22 -1.2 911,899 - IAI47_04340 0.22 +0.1 911,899 - IAI47_04340 0.22 +0.3 911,899 - IAI47_04340 0.22 +0.1 911,899 - IAI47_04340 0.22 -1.8 911,910 + IAI47_04340 0.24 -0.2 912,047 + IAI47_04340 0.48 +0.6 912,048 - IAI47_04340 0.49 -0.3 912,067 + IAI47_04340 0.52 -0.0 912,067 + IAI47_04340 0.52 -0.0 912,084 + IAI47_04340 0.55 +0.5 912,084 + IAI47_04340 0.55 +0.1 912,085 - IAI47_04340 0.55 -0.4 912,085 - IAI47_04340 0.55 -0.5 912,085 - IAI47_04340 0.55 -0.9 912,085 - IAI47_04340 0.55 -0.1 912,111 + IAI47_04340 0.60 +0.2 912,111 + IAI47_04340 0.60 +2.0 912,111 + IAI47_04340 0.60 -0.3 912,111 + IAI47_04340 0.60 -1.6 912,111 + IAI47_04340 0.60 +0.4 912,111 + IAI47_04340 0.60 -0.6 912,111 + IAI47_04340 0.60 -0.5 912,111 + IAI47_04340 0.60 -1.4 912,111 + IAI47_04340 0.60 +3.8 912,111 + IAI47_04340 0.60 +0.9 912,111 + IAI47_04340 0.60 -2.1 912,111 + IAI47_04340 0.60 +0.5 912,111 + IAI47_04340 0.60 +0.7 912,111 + IAI47_04340 0.60 +0.7 912,111 + IAI47_04340 0.60 +0.1 912,111 + IAI47_04340 0.60 -1.4 912,111 + IAI47_04340 0.60 +0.2 912,111 + IAI47_04340 0.60 -1.1 912,111 + IAI47_04340 0.60 -0.0 912,111 + IAI47_04340 0.60 +0.9 912,112 - IAI47_04340 0.60 -1.0 912,112 - IAI47_04340 0.60 -0.8 912,112 - IAI47_04340 0.60 -1.4 912,112 - IAI47_04340 0.60 +0.9 912,112 - IAI47_04340 0.60 -1.4 912,112 - IAI47_04340 0.60 -0.3 912,112 - IAI47_04340 0.60 -1.1 912,112 - IAI47_04340 0.60 -0.6 912,112 - IAI47_04340 0.60 -1.3 912,112 - IAI47_04340 0.60 +1.1 912,112 - IAI47_04340 0.60 +0.3 912,112 - IAI47_04340 0.60 -0.2 912,112 - IAI47_04340 0.60 +0.2 912,112 - IAI47_04340 0.60 -2.2 912,112 - IAI47_04340 0.60 -2.7 912,112 - IAI47_04340 0.60 -0.2 912,128 + IAI47_04340 0.63 +0.3 912,185 + IAI47_04340 0.73 +0.4 912,185 + IAI47_04340 0.73 -0.4 912,185 + IAI47_04340 0.73 +0.4 912,185 + IAI47_04340 0.73 +0.3 912,185 + IAI47_04340 0.73 -0.2 912,186 - IAI47_04340 0.73 +0.8 912,186 - IAI47_04340 0.73 +0.7 912,186 - IAI47_04340 0.73 +0.7 912,186 - IAI47_04340 0.73 +0.3 912,186 - IAI47_04340 0.73 -0.8 912,186 - IAI47_04340 0.73 +0.1 912,186 - IAI47_04340 0.73 -1.3 912,186 - IAI47_04340 0.73 -0.2 912,195 + IAI47_04340 0.74 +1.3 912,196 - IAI47_04340 0.75 -1.4 912,196 - IAI47_04340 0.75 -0.3 912,196 - IAI47_04340 0.75 +1.0 912,286 - +0.2 912,286 - +1.4 912,297 + +0.6 912,298 - +2.0
Or see this region's nucleotide sequence