Experiment: m.b. A22 0.04 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_830 and HP15_831 are separated by 2 nucleotides HP15_831 and HP15_832 are separated by 192 nucleotides HP15_832 and HP15_833 are separated by 642 nucleotides
HP15_830: HP15_830 - conserved hypothetical protein, at 848,500 to 849,003
_830
HP15_831: HP15_831 - protein containing glutaredoxin domain, at 849,006 to 849,806
_831
HP15_832: HP15_832 - aldo/keto reductase-like diketogulonate reductase, at 849,999 to 850,934
_832
HP15_833: HP15_833 - 2,5-diketo-D-gluconic acid reductase B, at 851,577 to 852,386
_833
Position (kb) 849
850
851 Strain fitness (log2 ratio) -2
-1
0
1 at 849.107 kb on - strand, within HP15_831 at 849.201 kb on + strand, within HP15_831 at 849.219 kb on - strand, within HP15_831 at 849.335 kb on - strand, within HP15_831 at 849.343 kb on + strand, within HP15_831 at 849.393 kb on + strand, within HP15_831 at 849.437 kb on - strand, within HP15_831 at 849.437 kb on - strand, within HP15_831 at 849.442 kb on - strand, within HP15_831 at 849.475 kb on + strand, within HP15_831 at 849.543 kb on + strand, within HP15_831 at 849.628 kb on - strand, within HP15_831 at 849.628 kb on - strand, within HP15_831 at 849.717 kb on - strand, within HP15_831 at 849.732 kb on - strand at 849.732 kb on - strand at 849.734 kb on + strand at 849.742 kb on - strand at 849.755 kb on + strand at 849.763 kb on - strand at 849.763 kb on - strand at 849.921 kb on + strand at 849.921 kb on - strand at 849.923 kb on + strand at 849.931 kb on + strand at 850.036 kb on + strand at 850.099 kb on - strand, within HP15_832 at 850.145 kb on - strand, within HP15_832 at 850.167 kb on - strand, within HP15_832 at 850.350 kb on + strand, within HP15_832 at 850.462 kb on + strand, within HP15_832 at 850.490 kb on + strand, within HP15_832 at 850.601 kb on + strand, within HP15_832 at 850.619 kb on - strand, within HP15_832 at 850.626 kb on + strand, within HP15_832 at 850.663 kb on + strand, within HP15_832 at 850.663 kb on + strand, within HP15_832 at 850.814 kb on - strand, within HP15_832 at 850.847 kb on - strand at 851.087 kb on + strand at 851.092 kb on + strand at 851.092 kb on + strand at 851.097 kb on + strand at 851.100 kb on - strand at 851.115 kb on - strand at 851.157 kb on + strand at 851.324 kb on + strand at 851.332 kb on - strand at 851.358 kb on + strand at 851.359 kb on + strand at 851.398 kb on - strand at 851.429 kb on + strand at 851.459 kb on - strand at 851.493 kb on - strand at 851.507 kb on - strand at 851.510 kb on + strand at 851.689 kb on + strand, within HP15_833 at 851.779 kb on - strand, within HP15_833 at 851.855 kb on + strand, within HP15_833 at 851.863 kb on - strand, within HP15_833 at 851.895 kb on - strand, within HP15_833 at 851.915 kb on + strand, within HP15_833
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. A22 0.04 mg/ml remove 849,107 - HP15_831 0.13 +0.3 849,201 + HP15_831 0.24 -0.5 849,219 - HP15_831 0.27 -0.3 849,335 - HP15_831 0.41 -0.6 849,343 + HP15_831 0.42 -0.1 849,393 + HP15_831 0.48 +1.2 849,437 - HP15_831 0.54 +0.5 849,437 - HP15_831 0.54 -0.1 849,442 - HP15_831 0.54 -0.2 849,475 + HP15_831 0.59 -0.3 849,543 + HP15_831 0.67 +0.2 849,628 - HP15_831 0.78 +0.1 849,628 - HP15_831 0.78 +0.2 849,717 - HP15_831 0.89 -0.8 849,732 - -0.0 849,732 - +0.3 849,734 + -0.1 849,742 - -0.0 849,755 + +0.1 849,763 - +0.2 849,763 - +0.3 849,921 + +0.1 849,921 - -0.4 849,923 + -0.4 849,931 + -0.3 850,036 + -0.4 850,099 - HP15_832 0.11 +0.7 850,145 - HP15_832 0.16 +0.5 850,167 - HP15_832 0.18 +0.4 850,350 + HP15_832 0.38 -0.5 850,462 + HP15_832 0.49 +0.1 850,490 + HP15_832 0.52 +1.1 850,601 + HP15_832 0.64 -2.6 850,619 - HP15_832 0.66 -0.4 850,626 + HP15_832 0.67 -0.2 850,663 + HP15_832 0.71 +0.7 850,663 + HP15_832 0.71 -0.3 850,814 - HP15_832 0.87 +0.3 850,847 - +0.3 851,087 + +0.2 851,092 + +1.6 851,092 + +0.1 851,097 + +1.4 851,100 - +0.0 851,115 - +0.2 851,157 + -0.1 851,324 + +0.1 851,332 - +0.5 851,358 + -0.1 851,359 + +0.1 851,398 - +0.1 851,429 + +0.0 851,459 - -0.4 851,493 - +0.0 851,507 - -0.1 851,510 + +0.3 851,689 + HP15_833 0.14 +0.8 851,779 - HP15_833 0.25 +0.0 851,855 + HP15_833 0.34 +0.4 851,863 - HP15_833 0.35 +0.5 851,895 - HP15_833 0.39 +0.1 851,915 + HP15_833 0.42 +0.3
Or see this region's nucleotide sequence