Experiment: Fusidic 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS27675 and BWI76_RS27680 are separated by 80 nucleotides BWI76_RS27680 and BWI76_RS27685 are separated by 148 nucleotides
BWI76_RS27675: BWI76_RS27675 - EmrB/QacA family drug resistance transporter, at 5,740,986 to 5,742,482
_RS27675
BWI76_RS27680: BWI76_RS27680 - TetR family transcriptional regulator, at 5,742,563 to 5,743,210
_RS27680
BWI76_RS27685: BWI76_RS27685 - N-acetyltransferase, at 5,743,359 to 5,743,775
_RS27685
Position (kb)
5742
5743
5744 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5 at 5741.584 kb on + strand, within BWI76_RS27675 at 5741.594 kb on + strand, within BWI76_RS27675 at 5741.841 kb on + strand, within BWI76_RS27675 at 5742.099 kb on - strand, within BWI76_RS27675 at 5742.169 kb on - strand, within BWI76_RS27675 at 5742.284 kb on - strand, within BWI76_RS27675 at 5742.336 kb on - strand at 5742.477 kb on + strand at 5742.654 kb on + strand, within BWI76_RS27680 at 5742.668 kb on - strand, within BWI76_RS27680 at 5743.065 kb on + strand, within BWI76_RS27680 at 5743.073 kb on - strand, within BWI76_RS27680 at 5743.073 kb on - strand, within BWI76_RS27680 at 5743.073 kb on - strand, within BWI76_RS27680 at 5743.080 kb on + strand, within BWI76_RS27680 at 5743.170 kb on + strand at 5743.178 kb on - strand at 5743.229 kb on + strand at 5743.240 kb on + strand at 5743.247 kb on + strand at 5743.354 kb on - strand at 5743.354 kb on - strand at 5743.396 kb on - strand at 5743.492 kb on - strand, within BWI76_RS27685 at 5743.492 kb on - strand, within BWI76_RS27685 at 5743.597 kb on + strand, within BWI76_RS27685 at 5743.635 kb on + strand, within BWI76_RS27685 at 5743.669 kb on - strand, within BWI76_RS27685 at 5743.674 kb on + strand, within BWI76_RS27685 at 5743.674 kb on + strand, within BWI76_RS27685 at 5743.674 kb on + strand, within BWI76_RS27685 at 5743.674 kb on + strand, within BWI76_RS27685 at 5743.682 kb on - strand, within BWI76_RS27685 at 5743.684 kb on + strand, within BWI76_RS27685 at 5743.684 kb on + strand, within BWI76_RS27685 at 5743.685 kb on + strand, within BWI76_RS27685 at 5743.685 kb on + strand, within BWI76_RS27685 at 5743.685 kb on + strand, within BWI76_RS27685 at 5743.685 kb on + strand, within BWI76_RS27685 at 5743.685 kb on + strand, within BWI76_RS27685 at 5743.693 kb on - strand, within BWI76_RS27685 at 5743.693 kb on - strand, within BWI76_RS27685 at 5743.695 kb on + strand, within BWI76_RS27685 at 5743.713 kb on - strand, within BWI76_RS27685 at 5743.717 kb on + strand, within BWI76_RS27685 at 5743.717 kb on + strand, within BWI76_RS27685 at 5743.717 kb on + strand, within BWI76_RS27685 at 5743.717 kb on + strand, within BWI76_RS27685 at 5743.723 kb on - strand, within BWI76_RS27685 at 5743.725 kb on - strand, within BWI76_RS27685 at 5743.725 kb on - strand, within BWI76_RS27685 at 5743.725 kb on - strand, within BWI76_RS27685 at 5743.725 kb on - strand, within BWI76_RS27685 at 5743.730 kb on + strand, within BWI76_RS27685 at 5743.735 kb on - strand at 5743.759 kb on + strand at 5743.814 kb on - strand at 5743.814 kb on - strand at 5743.908 kb on + strand at 5743.916 kb on - strand at 5743.916 kb on - strand at 5743.916 kb on - strand at 5744.052 kb on + strand at 5744.097 kb on + strand at 5744.105 kb on - strand at 5744.120 kb on - strand at 5744.134 kb on + strand at 5744.153 kb on + strand at 5744.153 kb on + strand at 5744.153 kb on + strand at 5744.154 kb on + strand at 5744.161 kb on - strand at 5744.161 kb on - strand at 5744.171 kb on + strand at 5744.171 kb on + strand at 5744.171 kb on + strand at 5744.171 kb on + strand at 5744.171 kb on + strand at 5744.171 kb on + strand at 5744.171 kb on + strand at 5744.173 kb on + strand at 5744.179 kb on - strand at 5744.179 kb on - strand at 5744.179 kb on - strand at 5744.179 kb on - strand at 5744.179 kb on - strand at 5744.179 kb on - strand at 5744.179 kb on - strand at 5744.185 kb on - strand at 5744.203 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 1 mg/ml remove 5,741,584 + BWI76_RS27675 0.40 +0.2 5,741,594 + BWI76_RS27675 0.41 -0.3 5,741,841 + BWI76_RS27675 0.57 +0.6 5,742,099 - BWI76_RS27675 0.74 -2.8 5,742,169 - BWI76_RS27675 0.79 -1.3 5,742,284 - BWI76_RS27675 0.87 -0.1 5,742,336 - -0.1 5,742,477 + -0.4 5,742,654 + BWI76_RS27680 0.14 +0.9 5,742,668 - BWI76_RS27680 0.16 +1.2 5,743,065 + BWI76_RS27680 0.77 +2.5 5,743,073 - BWI76_RS27680 0.79 +1.9 5,743,073 - BWI76_RS27680 0.79 +2.9 5,743,073 - BWI76_RS27680 0.79 +2.0 5,743,080 + BWI76_RS27680 0.80 +4.9 5,743,170 + +1.9 5,743,178 - +2.0 5,743,229 + -0.1 5,743,240 + -0.1 5,743,247 + -0.1 5,743,354 - -0.0 5,743,354 - -0.4 5,743,396 - -0.7 5,743,492 - BWI76_RS27685 0.32 -0.4 5,743,492 - BWI76_RS27685 0.32 -1.0 5,743,597 + BWI76_RS27685 0.57 +0.6 5,743,635 + BWI76_RS27685 0.66 -0.1 5,743,669 - BWI76_RS27685 0.74 +0.8 5,743,674 + BWI76_RS27685 0.76 +0.1 5,743,674 + BWI76_RS27685 0.76 -0.4 5,743,674 + BWI76_RS27685 0.76 -1.1 5,743,674 + BWI76_RS27685 0.76 -0.0 5,743,682 - BWI76_RS27685 0.77 +0.2 5,743,684 + BWI76_RS27685 0.78 -0.2 5,743,684 + BWI76_RS27685 0.78 -1.3 5,743,685 + BWI76_RS27685 0.78 +0.4 5,743,685 + BWI76_RS27685 0.78 +0.1 5,743,685 + BWI76_RS27685 0.78 +0.1 5,743,685 + BWI76_RS27685 0.78 +0.4 5,743,685 + BWI76_RS27685 0.78 -0.3 5,743,693 - BWI76_RS27685 0.80 -0.1 5,743,693 - BWI76_RS27685 0.80 +0.5 5,743,695 + BWI76_RS27685 0.81 -2.0 5,743,713 - BWI76_RS27685 0.85 +0.6 5,743,717 + BWI76_RS27685 0.86 +3.2 5,743,717 + BWI76_RS27685 0.86 -0.6 5,743,717 + BWI76_RS27685 0.86 -0.7 5,743,717 + BWI76_RS27685 0.86 +0.4 5,743,723 - BWI76_RS27685 0.87 -0.3 5,743,725 - BWI76_RS27685 0.88 -0.3 5,743,725 - BWI76_RS27685 0.88 -0.7 5,743,725 - BWI76_RS27685 0.88 -0.0 5,743,725 - BWI76_RS27685 0.88 +0.4 5,743,730 + BWI76_RS27685 0.89 -0.6 5,743,735 - +0.5 5,743,759 + -0.1 5,743,814 - -0.9 5,743,814 - -0.2 5,743,908 + +0.2 5,743,916 - +0.3 5,743,916 - -1.3 5,743,916 - +0.8 5,744,052 + +0.4 5,744,097 + +0.8 5,744,105 - +1.2 5,744,120 - +0.0 5,744,134 + -0.2 5,744,153 + -0.0 5,744,153 + +0.0 5,744,153 + +0.4 5,744,154 + +0.9 5,744,161 - +0.6 5,744,161 - -0.6 5,744,171 + +0.1 5,744,171 + -0.5 5,744,171 + -0.4 5,744,171 + -0.1 5,744,171 + -0.3 5,744,171 + +0.1 5,744,171 + -1.7 5,744,173 + +0.4 5,744,179 - -0.9 5,744,179 - +0.3 5,744,179 - +0.4 5,744,179 - -0.8 5,744,179 - +0.3 5,744,179 - -0.0 5,744,179 - -0.9 5,744,185 - -0.6 5,744,203 + -0.6
Or see this region's nucleotide sequence