Experiment: Fusidic 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS23150 and BWI76_RS23155 overlap by 4 nucleotides BWI76_RS23155 and BWI76_RS23160 are separated by 3 nucleotides BWI76_RS23160 and BWI76_RS23165 are separated by 9 nucleotides BWI76_RS23165 and BWI76_RS23170 overlap by 4 nucleotides
BWI76_RS23150: BWI76_RS23150 - propanediol utilization phosphotransacylase, at 4,824,550 to 4,825,182
_RS23150
BWI76_RS23155: BWI76_RS23155 - microcompartment protein PduM, at 4,825,179 to 4,825,670
_RS23155
BWI76_RS23160: BWI76_RS23160 - ethanolamine utilization protein EutN, at 4,825,674 to 4,825,949
_RS23160
BWI76_RS23165: BWI76_RS23165 - ATP:cob(I)alamin adenosyltransferase, at 4,825,959 to 4,826,969
_RS23165
BWI76_RS23170: BWI76_RS23170 - aldehyde dehydrogenase EutE, at 4,826,966 to 4,828,357
_RS23170
Position (kb) 4825
4826
4827 Strain fitness (log2 ratio) -1
0
1 at 4825.221 kb on - strand at 4825.274 kb on + strand, within BWI76_RS23155 at 4825.417 kb on - strand, within BWI76_RS23155 at 4825.496 kb on - strand, within BWI76_RS23155 at 4825.572 kb on + strand, within BWI76_RS23155 at 4825.612 kb on + strand, within BWI76_RS23155 at 4825.973 kb on - strand at 4826.213 kb on + strand, within BWI76_RS23165 at 4826.266 kb on + strand, within BWI76_RS23165 at 4826.442 kb on + strand, within BWI76_RS23165 at 4826.457 kb on + strand, within BWI76_RS23165 at 4826.550 kb on + strand, within BWI76_RS23165 at 4826.580 kb on - strand, within BWI76_RS23165 at 4826.996 kb on - strand at 4827.014 kb on + strand at 4827.104 kb on + strand at 4827.265 kb on + strand, within BWI76_RS23170 at 4827.389 kb on - strand, within BWI76_RS23170 at 4827.415 kb on - strand, within BWI76_RS23170 at 4827.474 kb on + strand, within BWI76_RS23170 at 4827.482 kb on - strand, within BWI76_RS23170 at 4827.688 kb on + strand, within BWI76_RS23170
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 1 mg/ml remove 4,825,221 - -0.7 4,825,274 + BWI76_RS23155 0.19 -0.1 4,825,417 - BWI76_RS23155 0.48 +0.2 4,825,496 - BWI76_RS23155 0.64 +0.4 4,825,572 + BWI76_RS23155 0.80 -0.1 4,825,612 + BWI76_RS23155 0.88 -1.4 4,825,973 - -1.6 4,826,213 + BWI76_RS23165 0.25 -1.2 4,826,266 + BWI76_RS23165 0.30 +0.3 4,826,442 + BWI76_RS23165 0.48 -0.8 4,826,457 + BWI76_RS23165 0.49 -1.0 4,826,550 + BWI76_RS23165 0.58 +0.0 4,826,580 - BWI76_RS23165 0.61 -1.0 4,826,996 - -0.1 4,827,014 + -0.1 4,827,104 + -0.3 4,827,265 + BWI76_RS23170 0.21 -0.3 4,827,389 - BWI76_RS23170 0.30 +0.1 4,827,415 - BWI76_RS23170 0.32 -0.1 4,827,474 + BWI76_RS23170 0.36 +0.6 4,827,482 - BWI76_RS23170 0.37 -0.6 4,827,688 + BWI76_RS23170 0.52 +1.1
Or see this region's nucleotide sequence