Experiment: Fusidic 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS14590 and BWI76_RS14595 are separated by 344 nucleotides BWI76_RS14595 and BWI76_RS14600 are separated by 344 nucleotides
BWI76_RS14590: BWI76_RS14590 - putative ABC transport system nucleotide binding/ATPase component, at 3,061,994 to 3,062,947
_RS14590
BWI76_RS14595: BWI76_RS14595 - cytochrome-c peroxidase, at 3,063,292 to 3,064,314
_RS14595
BWI76_RS14600: BWI76_RS14600 - ABC transporter ATP-binding protein, at 3,064,659 to 3,065,441
_RS14600
Position (kb)
3063
3064
3065 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3062.337 kb on + strand, within BWI76_RS14590 at 3062.345 kb on - strand, within BWI76_RS14590 at 3062.345 kb on - strand, within BWI76_RS14590 at 3062.345 kb on - strand, within BWI76_RS14590 at 3062.350 kb on - strand, within BWI76_RS14590 at 3062.367 kb on + strand, within BWI76_RS14590 at 3062.368 kb on + strand, within BWI76_RS14590 at 3062.368 kb on - strand, within BWI76_RS14590 at 3062.393 kb on + strand, within BWI76_RS14590 at 3062.401 kb on - strand, within BWI76_RS14590 at 3062.429 kb on + strand, within BWI76_RS14590 at 3062.429 kb on + strand, within BWI76_RS14590 at 3062.437 kb on - strand, within BWI76_RS14590 at 3062.447 kb on - strand, within BWI76_RS14590 at 3062.447 kb on - strand, within BWI76_RS14590 at 3062.460 kb on + strand, within BWI76_RS14590 at 3062.460 kb on + strand, within BWI76_RS14590 at 3062.460 kb on + strand, within BWI76_RS14590 at 3062.462 kb on + strand, within BWI76_RS14590 at 3062.462 kb on + strand, within BWI76_RS14590 at 3062.468 kb on - strand, within BWI76_RS14590 at 3062.488 kb on - strand, within BWI76_RS14590 at 3062.510 kb on + strand, within BWI76_RS14590 at 3062.518 kb on - strand, within BWI76_RS14590 at 3062.542 kb on + strand, within BWI76_RS14590 at 3062.547 kb on + strand, within BWI76_RS14590 at 3062.552 kb on + strand, within BWI76_RS14590 at 3062.552 kb on + strand, within BWI76_RS14590 at 3062.552 kb on + strand, within BWI76_RS14590 at 3062.552 kb on + strand, within BWI76_RS14590 at 3062.552 kb on + strand, within BWI76_RS14590 at 3062.552 kb on + strand, within BWI76_RS14590 at 3062.552 kb on + strand, within BWI76_RS14590 at 3062.552 kb on + strand, within BWI76_RS14590 at 3062.552 kb on + strand, within BWI76_RS14590 at 3062.560 kb on - strand, within BWI76_RS14590 at 3062.560 kb on - strand, within BWI76_RS14590 at 3062.563 kb on + strand, within BWI76_RS14590 at 3062.563 kb on + strand, within BWI76_RS14590 at 3062.563 kb on + strand, within BWI76_RS14590 at 3062.571 kb on - strand, within BWI76_RS14590 at 3062.571 kb on - strand, within BWI76_RS14590 at 3062.576 kb on + strand, within BWI76_RS14590 at 3062.676 kb on + strand at 3062.747 kb on - strand, within BWI76_RS14590 at 3062.811 kb on - strand, within BWI76_RS14590 at 3062.837 kb on - strand, within BWI76_RS14590 at 3062.839 kb on + strand, within BWI76_RS14590 at 3062.847 kb on - strand, within BWI76_RS14590 at 3062.847 kb on - strand, within BWI76_RS14590 at 3062.906 kb on - strand at 3062.921 kb on - strand at 3062.968 kb on + strand at 3062.969 kb on + strand at 3062.979 kb on + strand at 3062.979 kb on + strand at 3062.979 kb on + strand at 3062.985 kb on - strand at 3062.987 kb on - strand at 3062.987 kb on - strand at 3062.990 kb on - strand at 3062.992 kb on - strand at 3063.044 kb on + strand at 3063.044 kb on + strand at 3063.069 kb on + strand at 3063.069 kb on + strand at 3063.077 kb on - strand at 3063.127 kb on - strand at 3063.130 kb on - strand at 3063.130 kb on - strand at 3063.136 kb on - strand at 3063.158 kb on - strand at 3063.163 kb on + strand at 3063.242 kb on + strand at 3063.264 kb on + strand at 3063.354 kb on + strand at 3063.387 kb on - strand at 3063.503 kb on + strand, within BWI76_RS14595 at 3063.511 kb on - strand, within BWI76_RS14595 at 3063.511 kb on - strand, within BWI76_RS14595 at 3063.511 kb on - strand, within BWI76_RS14595 at 3063.536 kb on - strand at 3063.589 kb on - strand, within BWI76_RS14595 at 3063.652 kb on - strand at 3063.761 kb on - strand, within BWI76_RS14595 at 3063.764 kb on + strand, within BWI76_RS14595 at 3063.818 kb on + strand, within BWI76_RS14595 at 3063.884 kb on - strand, within BWI76_RS14595 at 3064.964 kb on - strand, within BWI76_RS14600
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 1 mg/ml remove 3,062,337 + BWI76_RS14590 0.36 -0.6 3,062,345 - BWI76_RS14590 0.37 -0.2 3,062,345 - BWI76_RS14590 0.37 -0.4 3,062,345 - BWI76_RS14590 0.37 -0.6 3,062,350 - BWI76_RS14590 0.37 -0.7 3,062,367 + BWI76_RS14590 0.39 -0.0 3,062,368 + BWI76_RS14590 0.39 -1.6 3,062,368 - BWI76_RS14590 0.39 -0.2 3,062,393 + BWI76_RS14590 0.42 +0.3 3,062,401 - BWI76_RS14590 0.43 -0.2 3,062,429 + BWI76_RS14590 0.46 -0.2 3,062,429 + BWI76_RS14590 0.46 +0.6 3,062,437 - BWI76_RS14590 0.46 -0.3 3,062,447 - BWI76_RS14590 0.47 -0.0 3,062,447 - BWI76_RS14590 0.47 -0.3 3,062,460 + BWI76_RS14590 0.49 -0.8 3,062,460 + BWI76_RS14590 0.49 -0.2 3,062,460 + BWI76_RS14590 0.49 -0.2 3,062,462 + BWI76_RS14590 0.49 -0.7 3,062,462 + BWI76_RS14590 0.49 -0.2 3,062,468 - BWI76_RS14590 0.50 -0.1 3,062,488 - BWI76_RS14590 0.52 -0.2 3,062,510 + BWI76_RS14590 0.54 +0.8 3,062,518 - BWI76_RS14590 0.55 -0.2 3,062,542 + BWI76_RS14590 0.57 -2.0 3,062,547 + BWI76_RS14590 0.58 +0.3 3,062,552 + BWI76_RS14590 0.58 -0.4 3,062,552 + BWI76_RS14590 0.58 +0.7 3,062,552 + BWI76_RS14590 0.58 -0.3 3,062,552 + BWI76_RS14590 0.58 +0.5 3,062,552 + BWI76_RS14590 0.58 +1.1 3,062,552 + BWI76_RS14590 0.58 -0.6 3,062,552 + BWI76_RS14590 0.58 -1.6 3,062,552 + BWI76_RS14590 0.58 -0.6 3,062,552 + BWI76_RS14590 0.58 +0.3 3,062,560 - BWI76_RS14590 0.59 +0.4 3,062,560 - BWI76_RS14590 0.59 -0.5 3,062,563 + BWI76_RS14590 0.60 +1.0 3,062,563 + BWI76_RS14590 0.60 +0.3 3,062,563 + BWI76_RS14590 0.60 -0.6 3,062,571 - BWI76_RS14590 0.60 -1.3 3,062,571 - BWI76_RS14590 0.60 -0.3 3,062,576 + BWI76_RS14590 0.61 -1.8 3,062,676 + -0.6 3,062,747 - BWI76_RS14590 0.79 -0.6 3,062,811 - BWI76_RS14590 0.86 -0.8 3,062,837 - BWI76_RS14590 0.88 +0.1 3,062,839 + BWI76_RS14590 0.89 -0.6 3,062,847 - BWI76_RS14590 0.89 -0.2 3,062,847 - BWI76_RS14590 0.89 +0.2 3,062,906 - -0.9 3,062,921 - -0.9 3,062,968 + +0.6 3,062,969 + -0.3 3,062,979 + -0.1 3,062,979 + +0.4 3,062,979 + -1.2 3,062,985 - -0.7 3,062,987 - -0.6 3,062,987 - -0.1 3,062,990 - +0.4 3,062,992 - -0.8 3,063,044 + +1.1 3,063,044 + +0.0 3,063,069 + +0.4 3,063,069 + +0.9 3,063,077 - -0.3 3,063,127 - -0.6 3,063,130 - +0.4 3,063,130 - -0.8 3,063,136 - -1.0 3,063,158 - +0.7 3,063,163 + -0.0 3,063,242 + +1.0 3,063,264 + -1.4 3,063,354 + -0.2 3,063,387 - -0.7 3,063,503 + BWI76_RS14595 0.21 -0.3 3,063,511 - BWI76_RS14595 0.21 -1.0 3,063,511 - BWI76_RS14595 0.21 -1.0 3,063,511 - BWI76_RS14595 0.21 -1.8 3,063,536 - +0.4 3,063,589 - BWI76_RS14595 0.29 -2.8 3,063,652 - +3.0 3,063,761 - BWI76_RS14595 0.46 -0.7 3,063,764 + BWI76_RS14595 0.46 -2.4 3,063,818 + BWI76_RS14595 0.51 -1.0 3,063,884 - BWI76_RS14595 0.58 +0.1 3,064,964 - BWI76_RS14600 0.39 -0.7
Or see this region's nucleotide sequence