Experiment: Fusidic 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS06525 and BWI76_RS06530 are separated by 132 nucleotides BWI76_RS06530 and BWI76_RS06535 are separated by 183 nucleotides
BWI76_RS06525: BWI76_RS06525 - ATP-dependent Clp protease proteolytic subunit, at 1,370,487 to 1,371,110
_RS06525
BWI76_RS06530: BWI76_RS06530 - ATP-dependent Clp protease ATP-binding subunit ClpX, at 1,371,243 to 1,372,517
_RS06530
BWI76_RS06535: BWI76_RS06535 - endopeptidase La, at 1,372,701 to 1,375,055
_RS06535
Position (kb)
1371
1372
1373 Strain fitness (log2 ratio)
-1
0
1 at 1370.369 kb on + strand at 1370.379 kb on - strand at 1370.397 kb on - strand at 1370.402 kb on - strand at 1370.523 kb on + strand at 1370.651 kb on + strand, within BWI76_RS06525 at 1370.854 kb on - strand, within BWI76_RS06525 at 1370.987 kb on - strand, within BWI76_RS06525 at 1371.000 kb on + strand, within BWI76_RS06525 at 1371.007 kb on + strand, within BWI76_RS06525 at 1371.232 kb on + strand at 1371.276 kb on + strand at 1371.435 kb on - strand, within BWI76_RS06530 at 1371.570 kb on - strand, within BWI76_RS06530 at 1371.705 kb on + strand, within BWI76_RS06530 at 1371.748 kb on - strand, within BWI76_RS06530 at 1372.140 kb on - strand, within BWI76_RS06530 at 1372.382 kb on + strand, within BWI76_RS06530 at 1372.590 kb on + strand at 1372.827 kb on + strand at 1372.968 kb on + strand, within BWI76_RS06535 at 1373.007 kb on - strand, within BWI76_RS06535 at 1373.007 kb on - strand, within BWI76_RS06535
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 1 mg/ml remove 1,370,369 + +0.3 1,370,379 - +1.4 1,370,397 - +1.0 1,370,402 - +0.3 1,370,523 + +0.4 1,370,651 + BWI76_RS06525 0.26 +0.3 1,370,854 - BWI76_RS06525 0.59 -0.0 1,370,987 - BWI76_RS06525 0.80 +0.5 1,371,000 + BWI76_RS06525 0.82 +0.3 1,371,007 + BWI76_RS06525 0.83 -0.0 1,371,232 + +0.8 1,371,276 + -0.0 1,371,435 - BWI76_RS06530 0.15 +1.1 1,371,570 - BWI76_RS06530 0.26 +0.2 1,371,705 + BWI76_RS06530 0.36 +0.6 1,371,748 - BWI76_RS06530 0.40 +0.7 1,372,140 - BWI76_RS06530 0.70 -0.2 1,372,382 + BWI76_RS06530 0.89 +1.4 1,372,590 + +0.5 1,372,827 + -0.3 1,372,968 + BWI76_RS06535 0.11 -0.1 1,373,007 - BWI76_RS06535 0.13 -0.3 1,373,007 - BWI76_RS06535 0.13 +0.2
Or see this region's nucleotide sequence