Experiment: Glucuronamide (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2237 and DvMF_2238 are separated by 209 nucleotides DvMF_2238 and DvMF_2239 are separated by 28 nucleotides
DvMF_2237: DvMF_2237 - tryptophan synthase subunit beta (RefSeq), at 2,800,110 to 2,801,432
_2237
DvMF_2238: DvMF_2238 - Tir chaperone family protein (RefSeq), at 2,801,642 to 2,802,142
_2238
DvMF_2239: DvMF_2239 - hypothetical protein (RefSeq), at 2,802,171 to 2,805,872
_2239
Position (kb)
2801
2802
2803 Strain fitness (log2 ratio)
-2
-1
0
1 at 2801.023 kb on - strand, within DvMF_2237 at 2801.042 kb on + strand, within DvMF_2237 at 2801.061 kb on - strand, within DvMF_2237 at 2801.141 kb on + strand, within DvMF_2237 at 2801.144 kb on - strand, within DvMF_2237 at 2801.204 kb on - strand, within DvMF_2237 at 2801.409 kb on - strand at 2801.478 kb on + strand at 2801.496 kb on - strand at 2801.921 kb on + strand, within DvMF_2238 at 2801.986 kb on - strand, within DvMF_2238 at 2802.012 kb on + strand, within DvMF_2238 at 2802.028 kb on + strand, within DvMF_2238 at 2802.061 kb on - strand, within DvMF_2238 at 2802.076 kb on + strand, within DvMF_2238 at 2802.076 kb on - strand, within DvMF_2238 at 2802.107 kb on + strand at 2802.271 kb on - strand at 2802.304 kb on + strand at 2802.367 kb on + strand at 2802.597 kb on - strand, within DvMF_2239 at 2802.617 kb on + strand, within DvMF_2239 at 2802.617 kb on + strand, within DvMF_2239 at 2802.642 kb on + strand, within DvMF_2239 at 2802.798 kb on - strand, within DvMF_2239 at 2802.854 kb on + strand, within DvMF_2239 at 2802.864 kb on + strand, within DvMF_2239 at 2803.041 kb on - strand, within DvMF_2239 at 2803.044 kb on + strand, within DvMF_2239
Per-strain Table
Position Strand Gene LocusTag Fraction Glucuronamide (N) remove 2,801,023 - DvMF_2237 0.69 +0.4 2,801,042 + DvMF_2237 0.70 -1.4 2,801,061 - DvMF_2237 0.72 -0.7 2,801,141 + DvMF_2237 0.78 -0.7 2,801,144 - DvMF_2237 0.78 -0.6 2,801,204 - DvMF_2237 0.83 -0.3 2,801,409 - -0.5 2,801,478 + -0.4 2,801,496 - -0.3 2,801,921 + DvMF_2238 0.56 -0.6 2,801,986 - DvMF_2238 0.69 -0.4 2,802,012 + DvMF_2238 0.74 -1.9 2,802,028 + DvMF_2238 0.77 -0.5 2,802,061 - DvMF_2238 0.84 -0.5 2,802,076 + DvMF_2238 0.87 -0.7 2,802,076 - DvMF_2238 0.87 -1.5 2,802,107 + -0.4 2,802,271 - -0.3 2,802,304 + +0.2 2,802,367 + -0.6 2,802,597 - DvMF_2239 0.12 -0.5 2,802,617 + DvMF_2239 0.12 +0.1 2,802,617 + DvMF_2239 0.12 +0.3 2,802,642 + DvMF_2239 0.13 -0.6 2,802,798 - DvMF_2239 0.17 -0.5 2,802,854 + DvMF_2239 0.18 -1.2 2,802,864 + DvMF_2239 0.19 -0.0 2,803,041 - DvMF_2239 0.24 -0.5 2,803,044 + DvMF_2239 0.24 -0.5
Or see this region's nucleotide sequence