Experiment: Glucuronamide (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0454 and DvMF_0455 are separated by 321 nucleotides DvMF_0455 and DvMF_0456 are separated by 63 nucleotides DvMF_0456 and DvMF_0457 are separated by 31 nucleotides
DvMF_0454: DvMF_0454 - excinuclease ABC subunit B (RefSeq), at 532,901 to 534,943
_0454
DvMF_0455: DvMF_0455 - hypothetical protein (RefSeq), at 535,265 to 535,786
_0455
DvMF_0456: DvMF_0456 - hypothetical protein (RefSeq), at 535,850 to 535,969
_0456
DvMF_0457: DvMF_0457 - leucyl/phenylalanyl-tRNA/protein transferase (RefSeq), at 536,001 to 536,834
_0457
Position (kb) 535
536 Strain fitness (log2 ratio) -1
0
1 at 534.438 kb on - strand, within DvMF_0454 at 534.561 kb on - strand, within DvMF_0454 at 534.793 kb on - strand at 534.812 kb on - strand at 534.860 kb on - strand at 535.409 kb on + strand, within DvMF_0455 at 535.419 kb on + strand, within DvMF_0455 at 535.579 kb on + strand, within DvMF_0455 at 535.579 kb on + strand, within DvMF_0455 at 535.677 kb on - strand, within DvMF_0455 at 535.771 kb on - strand at 535.844 kb on - strand at 536.171 kb on - strand, within DvMF_0457 at 536.271 kb on - strand, within DvMF_0457 at 536.551 kb on - strand, within DvMF_0457
Per-strain Table
Position Strand Gene LocusTag Fraction Glucuronamide (N) remove 534,438 - DvMF_0454 0.75 -0.7 534,561 - DvMF_0454 0.81 -0.7 534,793 - +0.6 534,812 - -1.4 534,860 - -0.6 535,409 + DvMF_0455 0.28 -0.8 535,419 + DvMF_0455 0.30 -0.5 535,579 + DvMF_0455 0.60 -1.0 535,579 + DvMF_0455 0.60 -1.3 535,677 - DvMF_0455 0.79 -1.6 535,771 - -0.6 535,844 - -0.6 536,171 - DvMF_0457 0.20 -0.7 536,271 - DvMF_0457 0.32 -0.9 536,551 - DvMF_0457 0.66 -0.6
Or see this region's nucleotide sequence