Experiment: MoLS4 with L-Threonine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt moaA and DVU0581 are separated by 236 nucleotides DVU0581 and DVU0582 are separated by 35 nucleotides DVU0582 and DVU0583 overlap by 4 nucleotides
DVU0580: moaA - molybdenum cofactor biosynthesis protein A (TIGR), at 643,924 to 644,949
moaA
DVU0581: DVU0581 - response regulator/anti-anti-sigma factor (TIGR), at 645,186 to 645,887
DVU0581
DVU0582: DVU0582 - sensory box histidine kinase (TIGR), at 645,923 to 647,941
DVU0582
DVU0583: DVU0583 - lipoprotein, putative (TIGR), at 647,938 to 649,209
DVU0583
Position (kb) 645
646
647
648 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 644.925 kb on + strand at 644.925 kb on + strand at 644.999 kb on - strand at 645.009 kb on - strand at 645.072 kb on + strand at 645.077 kb on + strand at 645.093 kb on - strand at 645.110 kb on + strand at 645.191 kb on + strand at 645.191 kb on - strand at 645.196 kb on + strand at 645.261 kb on - strand, within DVU0581 at 645.279 kb on + strand, within DVU0581 at 645.287 kb on - strand, within DVU0581 at 645.307 kb on + strand, within DVU0581 at 645.310 kb on + strand, within DVU0581 at 645.312 kb on + strand, within DVU0581 at 645.320 kb on - strand, within DVU0581 at 645.385 kb on - strand, within DVU0581 at 645.433 kb on + strand, within DVU0581 at 645.433 kb on + strand, within DVU0581 at 645.478 kb on - strand, within DVU0581 at 645.544 kb on + strand, within DVU0581 at 645.612 kb on + strand, within DVU0581 at 645.633 kb on + strand, within DVU0581 at 645.633 kb on + strand, within DVU0581 at 645.642 kb on + strand, within DVU0581 at 645.650 kb on - strand, within DVU0581 at 645.686 kb on + strand, within DVU0581 at 645.686 kb on + strand, within DVU0581 at 645.694 kb on - strand, within DVU0581 at 645.811 kb on + strand, within DVU0581 at 645.843 kb on + strand at 645.903 kb on + strand at 645.911 kb on - strand at 645.933 kb on + strand at 645.953 kb on + strand at 646.046 kb on + strand at 646.046 kb on + strand at 646.071 kb on + strand at 646.077 kb on - strand at 646.280 kb on - strand, within DVU0582 at 646.385 kb on + strand, within DVU0582 at 646.393 kb on - strand, within DVU0582 at 646.393 kb on - strand, within DVU0582 at 646.393 kb on - strand, within DVU0582 at 646.407 kb on + strand, within DVU0582 at 646.452 kb on + strand, within DVU0582 at 646.518 kb on - strand, within DVU0582 at 646.518 kb on - strand, within DVU0582 at 646.547 kb on + strand, within DVU0582 at 646.549 kb on - strand, within DVU0582 at 646.606 kb on + strand, within DVU0582 at 646.614 kb on - strand, within DVU0582 at 646.619 kb on + strand, within DVU0582 at 646.671 kb on + strand, within DVU0582 at 646.691 kb on + strand, within DVU0582 at 646.721 kb on - strand, within DVU0582 at 646.764 kb on - strand, within DVU0582 at 646.813 kb on + strand, within DVU0582 at 646.931 kb on + strand, within DVU0582 at 646.970 kb on - strand, within DVU0582 at 647.009 kb on + strand, within DVU0582 at 647.009 kb on + strand, within DVU0582 at 647.017 kb on - strand, within DVU0582 at 647.164 kb on + strand, within DVU0582 at 647.210 kb on + strand, within DVU0582 at 647.286 kb on + strand, within DVU0582 at 647.301 kb on + strand, within DVU0582 at 647.321 kb on - strand, within DVU0582 at 647.335 kb on + strand, within DVU0582 at 647.338 kb on - strand, within DVU0582 at 647.397 kb on + strand, within DVU0582 at 647.484 kb on + strand, within DVU0582 at 647.497 kb on - strand, within DVU0582 at 647.497 kb on - strand, within DVU0582 at 647.551 kb on + strand, within DVU0582 at 647.600 kb on - strand, within DVU0582 at 647.614 kb on - strand, within DVU0582 at 647.624 kb on + strand, within DVU0582 at 647.630 kb on + strand, within DVU0582 at 647.649 kb on + strand, within DVU0582 at 647.798 kb on + strand at 647.886 kb on - strand at 648.046 kb on + strand at 648.051 kb on + strand at 648.084 kb on - strand, within DVU0583 at 648.084 kb on - strand, within DVU0583 at 648.084 kb on - strand, within DVU0583 at 648.084 kb on - strand, within DVU0583 at 648.204 kb on - strand, within DVU0583 at 648.204 kb on - strand, within DVU0583 at 648.259 kb on + strand, within DVU0583 at 648.354 kb on - strand, within DVU0583 at 648.453 kb on + strand, within DVU0583 at 648.453 kb on + strand, within DVU0583 at 648.461 kb on - strand, within DVU0583 at 648.523 kb on - strand, within DVU0583 at 648.588 kb on + strand, within DVU0583 at 648.850 kb on + strand, within DVU0583 at 648.858 kb on + strand, within DVU0583 at 648.859 kb on - strand, within DVU0583 at 648.907 kb on + strand, within DVU0583
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Threonine (N) remove 644,925 + +2.2 644,925 + +2.6 644,999 - -2.7 645,009 - -0.4 645,072 + -2.8 645,077 + -0.3 645,093 - -0.4 645,110 + +0.9 645,191 + -1.0 645,191 - +0.1 645,196 + +2.5 645,261 - DVU0581 0.11 +0.2 645,279 + DVU0581 0.13 +2.3 645,287 - DVU0581 0.14 -0.4 645,307 + DVU0581 0.17 -2.2 645,310 + DVU0581 0.18 -1.8 645,312 + DVU0581 0.18 -0.1 645,320 - DVU0581 0.19 -0.7 645,385 - DVU0581 0.28 -1.3 645,433 + DVU0581 0.35 -1.5 645,433 + DVU0581 0.35 -1.0 645,478 - DVU0581 0.42 +1.9 645,544 + DVU0581 0.51 -0.3 645,612 + DVU0581 0.61 -0.1 645,633 + DVU0581 0.64 -0.4 645,633 + DVU0581 0.64 +0.2 645,642 + DVU0581 0.65 -1.4 645,650 - DVU0581 0.66 +2.2 645,686 + DVU0581 0.71 -0.8 645,686 + DVU0581 0.71 +0.2 645,694 - DVU0581 0.72 -0.3 645,811 + DVU0581 0.89 +1.2 645,843 + -1.4 645,903 + -0.3 645,911 - +0.5 645,933 + -0.9 645,953 + +1.0 646,046 + +0.3 646,046 + +1.5 646,071 + +1.3 646,077 - -0.3 646,280 - DVU0582 0.18 -0.2 646,385 + DVU0582 0.23 +0.5 646,393 - DVU0582 0.23 -0.2 646,393 - DVU0582 0.23 -0.9 646,393 - DVU0582 0.23 -1.0 646,407 + DVU0582 0.24 -0.4 646,452 + DVU0582 0.26 +0.2 646,518 - DVU0582 0.29 +0.4 646,518 - DVU0582 0.29 -0.0 646,547 + DVU0582 0.31 -0.8 646,549 - DVU0582 0.31 +1.8 646,606 + DVU0582 0.34 -0.5 646,614 - DVU0582 0.34 -0.9 646,619 + DVU0582 0.34 -0.9 646,671 + DVU0582 0.37 +1.2 646,691 + DVU0582 0.38 +0.4 646,721 - DVU0582 0.40 +2.1 646,764 - DVU0582 0.42 -2.2 646,813 + DVU0582 0.44 +1.1 646,931 + DVU0582 0.50 +2.8 646,970 - DVU0582 0.52 +1.0 647,009 + DVU0582 0.54 +0.9 647,009 + DVU0582 0.54 +1.2 647,017 - DVU0582 0.54 -1.3 647,164 + DVU0582 0.61 +1.6 647,210 + DVU0582 0.64 +1.1 647,286 + DVU0582 0.68 +2.4 647,301 + DVU0582 0.68 -1.7 647,321 - DVU0582 0.69 -2.5 647,335 + DVU0582 0.70 -0.8 647,338 - DVU0582 0.70 -1.3 647,397 + DVU0582 0.73 -0.6 647,484 + DVU0582 0.77 +0.8 647,497 - DVU0582 0.78 +1.3 647,497 - DVU0582 0.78 +0.1 647,551 + DVU0582 0.81 +0.0 647,600 - DVU0582 0.83 -0.4 647,614 - DVU0582 0.84 -1.1 647,624 + DVU0582 0.84 -0.5 647,630 + DVU0582 0.85 -0.9 647,649 + DVU0582 0.85 +1.8 647,798 + -1.6 647,886 - -0.8 648,046 + +0.5 648,051 + +0.9 648,084 - DVU0583 0.11 +3.3 648,084 - DVU0583 0.11 -0.9 648,084 - DVU0583 0.11 -0.8 648,084 - DVU0583 0.11 -1.4 648,204 - DVU0583 0.21 -0.3 648,204 - DVU0583 0.21 +2.0 648,259 + DVU0583 0.25 +1.5 648,354 - DVU0583 0.33 +0.1 648,453 + DVU0583 0.40 -1.3 648,453 + DVU0583 0.40 -0.4 648,461 - DVU0583 0.41 -1.9 648,523 - DVU0583 0.46 +1.8 648,588 + DVU0583 0.51 +0.5 648,850 + DVU0583 0.72 -0.9 648,858 + DVU0583 0.72 +3.8 648,859 - DVU0583 0.72 -1.2 648,907 + DVU0583 0.76 -0.9
Or see this region's nucleotide sequence