Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU0438

Experiment: MoLS4 with L-Threonine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoLS4 with L-Threonine (N)
491,257	-		DVU0437	0.34	-1.4
491,350	+		DVU0437	0.41	+0.5
491,350	+		DVU0437	0.41	+2.1
491,350	+		DVU0437	0.41	-2.8
491,358	-		DVU0437	0.41	-0.6
491,361	+		DVU0437	0.41	+0.3
491,369	-		DVU0437	0.42	-1.2
491,379	-		DVU0437	0.43	-1.6
491,382	-		DVU0437	0.43	+0.6
491,384	-		DVU0437	0.43	-1.6
491,423	+		DVU0437	0.46	+1.3
491,470	-		DVU0437	0.49	+1.0
491,548	-		DVU0437	0.54	-3.0
491,613	+		DVU0437	0.59	+0.3
491,619	-		DVU0437	0.59	-2.0
491,634	+		DVU0437	0.60	+4.1
491,661	+		DVU0437	0.62	-3.3
491,704	+		DVU0437	0.65	-1.1
491,722	+		DVU0437	0.66	-1.8
491,753	+		DVU0437	0.68	-2.2
491,801	-		DVU0437	0.72	-1.0
491,805	+		DVU0437	0.72	-0.8
491,812	+		DVU0437	0.72	+2.0
491,837	-		DVU0437	0.74	-1.1
491,886	+		DVU0437	0.77	-1.5
491,896	+		DVU0437	0.78	+0.8
491,958	+		DVU0437	0.82	+2.5
492,070	+				-0.8
492,079	-				+1.5
492,180	-				-1.6
492,182	+				-0.3
492,188	+				-1.6
492,257	-				-1.6
492,274	+				+0.5
492,342	+				-2.2
492,390	-				-1.1
492,452	+				-0.9
492,532	-		DVU0438	0.10	+1.2
492,578	-		DVU0438	0.12	-0.5
492,583	-		DVU0438	0.12	-0.9
492,626	+		DVU0438	0.13	-0.3
492,654	+		DVU0438	0.14	+0.1
492,662	-		DVU0438	0.14	+2.2
492,728	+		DVU0438	0.17	+1.0
492,754	+		DVU0438	0.17	+2.8
492,757	-		DVU0438	0.17	-1.1
492,757	-		DVU0438	0.17	+3.8
492,773	-		DVU0438	0.18	-0.5
492,805	-		DVU0438	0.19	-0.3
492,854	-		DVU0438	0.21	-0.9
492,944	+		DVU0438	0.23	+0.2
492,983	+		DVU0438	0.25	-0.6
492,991	-		DVU0438	0.25	-0.6
493,003	-		DVU0438	0.25	-0.9
493,005	+		DVU0438	0.25	-1.7
493,010	+		DVU0438	0.26	-0.9
493,013	-		DVU0438	0.26	+0.8
493,068	-		DVU0438	0.27	+0.8
493,081	+		DVU0438	0.28	+0.8
493,099	+		DVU0438	0.28	-0.6
493,131	-		DVU0438	0.29	-0.9
493,182	-		DVU0438	0.31	-1.5
493,211	+		DVU0438	0.32	-1.8
493,218	-		DVU0438	0.32	-1.0
493,240	-		DVU0438	0.33	-1.3
493,283	-		DVU0438	0.34	-0.4
493,299	+		DVU0438	0.35	+0.1
493,309	+		DVU0438	0.35	+2.5
493,360	-		DVU0438	0.37	+0.4
493,367	-		DVU0438	0.37	-0.1
493,390	-		DVU0438	0.38	+1.8
493,432	+		DVU0438	0.39	-1.1
493,440	-		DVU0438	0.39	+2.5
493,459	+		DVU0438	0.40	+0.5
493,467	-		DVU0438	0.40	-1.9
493,495	+		DVU0438	0.41	-4.7
493,500	+		DVU0438	0.41	-2.4
493,513	-		DVU0438	0.42	-1.6
493,519	+		DVU0438	0.42	-2.3
493,552	-		DVU0438	0.43	-0.7
493,569	-		DVU0438	0.43	+1.0
493,614	-		DVU0438	0.45	-0.6
493,656	+		DVU0438	0.46	+1.8
493,656	+		DVU0438	0.46	-0.2
493,656	+		DVU0438	0.46	-2.3
493,664	-		DVU0438	0.46	+1.2
493,666	-		DVU0438	0.47	-1.3
493,683	-		DVU0438	0.47	-1.6
493,718	-		DVU0438	0.48	-0.1
493,722	-		DVU0438	0.48	+3.0
493,722	-		DVU0438	0.48	-0.4
493,722	-		DVU0438	0.48	+1.2
493,722	-		DVU0438	0.48	-0.9
493,722	-		DVU0438	0.48	+4.2
493,722	-		DVU0438	0.48	+0.2
493,758	-		DVU0438	0.49	-1.1
493,813	+		DVU0438	0.51	-2.6
493,866	-		DVU0438	0.53	+2.2
493,919	-		DVU0438	0.55	-1.5
493,929	+		DVU0438	0.55	+0.1
493,937	-		DVU0438	0.55	-0.9
493,951	+		DVU0438	0.56	-0.8
493,959	-		DVU0438	0.56	-0.4
493,966	-		DVU0438	0.56	+1.6
494,137	-		DVU0438	0.62	-2.5
494,175	+		DVU0438	0.63	-1.1
494,175	+		DVU0438	0.63	+1.6
494,183	-		DVU0438	0.63	-0.5
494,210	+		DVU0438	0.64	+0.4
494,222	+		DVU0438	0.64	+1.4
494,229	+		DVU0438	0.65	-0.1
494,246	-		DVU0438	0.65	+0.6
494,265	+		DVU0438	0.66	+3.1
494,355	+		DVU0438	0.69	-1.3
494,367	-		DVU0438	0.69	-1.3
494,434	+		DVU0438	0.71	-1.5
494,443	-		DVU0438	0.71	-1.6
494,464	-		DVU0438	0.72	+1.1
494,483	-		DVU0438	0.73	-1.5
494,579	-		DVU0438	0.76	-2.8
494,623	+		DVU0438	0.77	+0.2
494,639	-		DVU0438	0.78	+1.5
494,643	+		DVU0438	0.78	+0.5
494,643	+		DVU0438	0.78	-0.3
494,643	+		DVU0438	0.78	-1.7
494,643	+		DVU0438	0.78	-2.5
494,643	+		DVU0438	0.78	-0.5
494,651	-		DVU0438	0.78	-1.7
494,651	-		DVU0438	0.78	-1.1
494,651	-		DVU0438	0.78	-3.3
494,698	-		DVU0438	0.80	+0.3
494,703	-		DVU0438	0.80	+2.8
494,722	-		DVU0438	0.80	-0.3
494,750	+		DVU0438	0.81	+3.6
494,757	+		DVU0438	0.81	-1.6
494,771	+		DVU0438	0.82	-2.1
494,776	+		DVU0438	0.82	-3.8
494,784	-		DVU0438	0.82	-0.6
494,784	-		DVU0438	0.82	+2.1
494,794	+		DVU0438	0.83	-1.8
494,802	-		DVU0438	0.83	+0.2
494,852	-		DVU0438	0.84	-1.7
494,866	+		DVU0438	0.85	-1.4
494,886	-		DVU0438	0.86	-0.9
494,917	-		DVU0438	0.87	-0.8
494,936	-		DVU0438	0.87	-0.4
494,943	-		DVU0438	0.87	+1.6
495,041	-				+2.8
495,041	-				+0.2
495,069	-				-0.7
495,131	+				+0.6
495,190	-				-1.8
495,220	+				-0.9
495,235	+				-1.3
495,243	-				-1.2
495,243	-				-0.8
495,243	-				-2.1
495,308	+				+3.1
495,420	+		DVU0439	0.16	+0.5
495,421	-		DVU0439	0.17	-1.7
495,484	-		DVU0439	0.38	-0.8
495,496	+		DVU0439	0.43	-0.4
495,515	-		DVU0439	0.49	+0.2
495,581	+		DVU0439	0.72	-0.0
495,581	+		DVU0439	0.72	-0.2
495,866	-				+2.6
495,918	+				-3.5
495,921	+				+2.8
495,949	+				+1.8
495,957	-				-1.3
496,018	+				-0.9
496,023	+				+0.8
496,026	-				-0.9
496,031	-				-1.6
496,031	-				-0.2
496,180	+				+0.5
496,183	-				-2.2
496,194	-				-1.8
496,199	+				-0.6
496,226	+				+2.2
496,234	-				-1.0
496,255	-				-1.9
496,265	+		DVU0440	0.10	+3.3
496,275	+		DVU0440	0.11	-0.4
496,313	+		DVU0440	0.14	-1.2