Experiment: MoLS4 with L-Threonine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0436 and DVU0437 are separated by 154 nucleotides DVU0437 and DVU0438 overlap by 4 nucleotides
DVU0436: DVU0436 - transcriptional regulator, TetR family (TIGR), at 489,896 to 490,600
DVU0436
DVU0437: DVU0437 - efflux transporter, RND family, MFP subunit (TIGR), at 490,755 to 492,215
DVU0437
DVU0438: DVU0438 - AcrB/AcrD/AcrF family protein (TIGR), at 492,212 to 495,337
DVU0438
Position (kb) 490
491
492
493 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 489.884 kb on + strand at 489.891 kb on + strand at 489.930 kb on + strand at 489.935 kb on + strand at 489.943 kb on - strand at 489.943 kb on - strand at 490.119 kb on + strand, within DVU0436 at 490.418 kb on - strand, within DVU0436 at 490.550 kb on + strand at 490.703 kb on + strand at 490.715 kb on + strand at 490.723 kb on - strand at 490.783 kb on + strand at 490.793 kb on - strand at 490.853 kb on - strand at 490.857 kb on + strand at 490.857 kb on + strand at 490.896 kb on - strand at 490.952 kb on + strand, within DVU0437 at 490.952 kb on + strand, within DVU0437 at 491.033 kb on + strand, within DVU0437 at 491.033 kb on + strand, within DVU0437 at 491.033 kb on + strand, within DVU0437 at 491.257 kb on - strand, within DVU0437 at 491.350 kb on + strand, within DVU0437 at 491.350 kb on + strand, within DVU0437 at 491.350 kb on + strand, within DVU0437 at 491.358 kb on - strand, within DVU0437 at 491.361 kb on + strand, within DVU0437 at 491.369 kb on - strand, within DVU0437 at 491.379 kb on - strand, within DVU0437 at 491.382 kb on - strand, within DVU0437 at 491.384 kb on - strand, within DVU0437 at 491.423 kb on + strand, within DVU0437 at 491.470 kb on - strand, within DVU0437 at 491.548 kb on - strand, within DVU0437 at 491.613 kb on + strand, within DVU0437 at 491.619 kb on - strand, within DVU0437 at 491.634 kb on + strand, within DVU0437 at 491.661 kb on + strand, within DVU0437 at 491.704 kb on + strand, within DVU0437 at 491.722 kb on + strand, within DVU0437 at 491.753 kb on + strand, within DVU0437 at 491.801 kb on - strand, within DVU0437 at 491.805 kb on + strand, within DVU0437 at 491.812 kb on + strand, within DVU0437 at 491.837 kb on - strand, within DVU0437 at 491.886 kb on + strand, within DVU0437 at 491.896 kb on + strand, within DVU0437 at 491.958 kb on + strand, within DVU0437 at 492.070 kb on + strand at 492.079 kb on - strand at 492.180 kb on - strand at 492.182 kb on + strand at 492.188 kb on + strand at 492.257 kb on - strand at 492.274 kb on + strand at 492.342 kb on + strand at 492.390 kb on - strand at 492.452 kb on + strand at 492.532 kb on - strand, within DVU0438 at 492.578 kb on - strand, within DVU0438 at 492.583 kb on - strand, within DVU0438 at 492.626 kb on + strand, within DVU0438 at 492.654 kb on + strand, within DVU0438 at 492.662 kb on - strand, within DVU0438 at 492.728 kb on + strand, within DVU0438 at 492.754 kb on + strand, within DVU0438 at 492.757 kb on - strand, within DVU0438 at 492.757 kb on - strand, within DVU0438 at 492.773 kb on - strand, within DVU0438 at 492.805 kb on - strand, within DVU0438 at 492.854 kb on - strand, within DVU0438 at 492.944 kb on + strand, within DVU0438 at 492.983 kb on + strand, within DVU0438 at 492.991 kb on - strand, within DVU0438 at 493.003 kb on - strand, within DVU0438 at 493.005 kb on + strand, within DVU0438 at 493.010 kb on + strand, within DVU0438 at 493.013 kb on - strand, within DVU0438 at 493.068 kb on - strand, within DVU0438 at 493.081 kb on + strand, within DVU0438 at 493.099 kb on + strand, within DVU0438 at 493.131 kb on - strand, within DVU0438 at 493.182 kb on - strand, within DVU0438 at 493.211 kb on + strand, within DVU0438
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Threonine (N) remove 489,884 + +2.0 489,891 + +0.5 489,930 + -0.1 489,935 + -1.2 489,943 - +0.4 489,943 - -0.2 490,119 + DVU0436 0.32 -0.9 490,418 - DVU0436 0.74 -3.6 490,550 + +0.5 490,703 + -0.2 490,715 + -1.2 490,723 - +1.8 490,783 + -1.4 490,793 - -0.7 490,853 - -0.6 490,857 + -0.2 490,857 + +1.3 490,896 - +2.8 490,952 + DVU0437 0.13 -1.2 490,952 + DVU0437 0.13 -1.5 491,033 + DVU0437 0.19 -1.9 491,033 + DVU0437 0.19 -0.5 491,033 + DVU0437 0.19 -2.2 491,257 - DVU0437 0.34 -1.4 491,350 + DVU0437 0.41 +0.5 491,350 + DVU0437 0.41 +2.1 491,350 + DVU0437 0.41 -2.8 491,358 - DVU0437 0.41 -0.6 491,361 + DVU0437 0.41 +0.3 491,369 - DVU0437 0.42 -1.2 491,379 - DVU0437 0.43 -1.6 491,382 - DVU0437 0.43 +0.6 491,384 - DVU0437 0.43 -1.6 491,423 + DVU0437 0.46 +1.3 491,470 - DVU0437 0.49 +1.0 491,548 - DVU0437 0.54 -3.0 491,613 + DVU0437 0.59 +0.3 491,619 - DVU0437 0.59 -2.0 491,634 + DVU0437 0.60 +4.1 491,661 + DVU0437 0.62 -3.3 491,704 + DVU0437 0.65 -1.1 491,722 + DVU0437 0.66 -1.8 491,753 + DVU0437 0.68 -2.2 491,801 - DVU0437 0.72 -1.0 491,805 + DVU0437 0.72 -0.8 491,812 + DVU0437 0.72 +2.0 491,837 - DVU0437 0.74 -1.1 491,886 + DVU0437 0.77 -1.5 491,896 + DVU0437 0.78 +0.8 491,958 + DVU0437 0.82 +2.5 492,070 + -0.8 492,079 - +1.5 492,180 - -1.6 492,182 + -0.3 492,188 + -1.6 492,257 - -1.6 492,274 + +0.5 492,342 + -2.2 492,390 - -1.1 492,452 + -0.9 492,532 - DVU0438 0.10 +1.2 492,578 - DVU0438 0.12 -0.5 492,583 - DVU0438 0.12 -0.9 492,626 + DVU0438 0.13 -0.3 492,654 + DVU0438 0.14 +0.1 492,662 - DVU0438 0.14 +2.2 492,728 + DVU0438 0.17 +1.0 492,754 + DVU0438 0.17 +2.8 492,757 - DVU0438 0.17 -1.1 492,757 - DVU0438 0.17 +3.8 492,773 - DVU0438 0.18 -0.5 492,805 - DVU0438 0.19 -0.3 492,854 - DVU0438 0.21 -0.9 492,944 + DVU0438 0.23 +0.2 492,983 + DVU0438 0.25 -0.6 492,991 - DVU0438 0.25 -0.6 493,003 - DVU0438 0.25 -0.9 493,005 + DVU0438 0.25 -1.7 493,010 + DVU0438 0.26 -0.9 493,013 - DVU0438 0.26 +0.8 493,068 - DVU0438 0.27 +0.8 493,081 + DVU0438 0.28 +0.8 493,099 + DVU0438 0.28 -0.6 493,131 - DVU0438 0.29 -0.9 493,182 - DVU0438 0.31 -1.5 493,211 + DVU0438 0.32 -1.8
Or see this region's nucleotide sequence