Experiment: MoLS4 with L-Threonine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0727 and DVU0728 are separated by 28 nucleotides DVU0728 and DVU0729 are separated by 221 nucleotides DVU0729 and DVU0730 are separated by 389 nucleotides
DVU0727: DVU0727 - conserved hypothetical protein (TIGR), at 812,110 to 812,784
DVU0727
DVU0728: DVU0728 - hypothetical protein (TIGR), at 812,813 to 812,983
DVU0728
DVU0729: DVU0729 - hypothetical protein (TIGR), at 813,205 to 813,660
DVU0729
DVU0730: DVU0730 - conserved hypothetical protein (TIGR), at 814,050 to 815,015
DVU0730
Position (kb) 813
814 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 812.207 kb on + strand, within DVU0727 at 812.214 kb on + strand, within DVU0727 at 812.301 kb on + strand, within DVU0727 at 812.358 kb on + strand, within DVU0727 at 812.364 kb on + strand, within DVU0727 at 812.372 kb on - strand, within DVU0727 at 812.372 kb on - strand, within DVU0727 at 812.376 kb on + strand, within DVU0727 at 812.386 kb on + strand, within DVU0727 at 812.394 kb on - strand, within DVU0727 at 812.396 kb on - strand, within DVU0727 at 812.411 kb on - strand, within DVU0727 at 812.411 kb on - strand, within DVU0727 at 812.426 kb on - strand, within DVU0727 at 812.491 kb on + strand, within DVU0727 at 812.499 kb on - strand, within DVU0727 at 812.565 kb on + strand, within DVU0727 at 812.596 kb on - strand, within DVU0727 at 812.655 kb on - strand, within DVU0727 at 813.114 kb on + strand at 813.122 kb on - strand at 813.211 kb on - strand at 813.226 kb on - strand at 813.239 kb on - strand at 813.257 kb on - strand, within DVU0729 at 813.299 kb on - strand, within DVU0729 at 813.327 kb on + strand, within DVU0729 at 813.337 kb on + strand, within DVU0729 at 813.577 kb on + strand, within DVU0729 at 813.577 kb on + strand, within DVU0729 at 813.591 kb on + strand, within DVU0729 at 813.648 kb on + strand at 813.685 kb on + strand at 813.708 kb on + strand at 813.742 kb on - strand at 813.773 kb on - strand at 813.825 kb on + strand at 813.992 kb on + strand at 814.005 kb on - strand at 814.047 kb on + strand at 814.057 kb on - strand at 814.094 kb on - strand at 814.247 kb on + strand, within DVU0730 at 814.268 kb on + strand, within DVU0730 at 814.308 kb on + strand, within DVU0730 at 814.472 kb on + strand, within DVU0730 at 814.525 kb on + strand, within DVU0730
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Threonine (N) remove 812,207 + DVU0727 0.14 -0.4 812,214 + DVU0727 0.15 -0.3 812,301 + DVU0727 0.28 +2.1 812,358 + DVU0727 0.37 +0.8 812,364 + DVU0727 0.38 -0.6 812,372 - DVU0727 0.39 -0.8 812,372 - DVU0727 0.39 -1.0 812,376 + DVU0727 0.39 -1.2 812,386 + DVU0727 0.41 +2.4 812,394 - DVU0727 0.42 -1.5 812,396 - DVU0727 0.42 -0.9 812,411 - DVU0727 0.45 +3.3 812,411 - DVU0727 0.45 +1.8 812,426 - DVU0727 0.47 -0.4 812,491 + DVU0727 0.56 +0.4 812,499 - DVU0727 0.58 -1.7 812,565 + DVU0727 0.67 +0.3 812,596 - DVU0727 0.72 -0.2 812,655 - DVU0727 0.81 -1.6 813,114 + -1.0 813,122 - -0.8 813,211 - -1.8 813,226 - -0.6 813,239 - -2.2 813,257 - DVU0729 0.11 -1.2 813,299 - DVU0729 0.21 +0.1 813,327 + DVU0729 0.27 -1.3 813,337 + DVU0729 0.29 -1.3 813,577 + DVU0729 0.82 -0.9 813,577 + DVU0729 0.82 -1.2 813,591 + DVU0729 0.85 +0.0 813,648 + +1.2 813,685 + -1.4 813,708 + -2.1 813,742 - +0.1 813,773 - -1.8 813,825 + -1.2 813,992 + -0.5 814,005 - -0.8 814,047 + -0.6 814,057 - -1.2 814,094 - -1.5 814,247 + DVU0730 0.20 +2.4 814,268 + DVU0730 0.23 +2.9 814,308 + DVU0730 0.27 -1.2 814,472 + DVU0730 0.44 +0.8 814,525 + DVU0730 0.49 -0.9
Or see this region's nucleotide sequence