Strain Fitness in Pantoea sp. MT58 around IAI47_19450

Experiment: Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50
118,246	-		IAI47_19445	0.16	+0.1
118,246	-		IAI47_19445	0.16	+2.3
118,254	+		IAI47_19445	0.16	+1.1
118,254	+		IAI47_19445	0.16	+0.3
118,255	-		IAI47_19445	0.17	-0.3
118,255	-		IAI47_19445	0.17	+1.2
118,301	+		IAI47_19445	0.22	-1.2
118,301	+		IAI47_19445	0.22	-0.4
118,301	+		IAI47_19445	0.22	-1.4
118,301	+		IAI47_19445	0.22	+1.1
118,301	+		IAI47_19445	0.22	-1.4
118,302	-		IAI47_19445	0.22	+2.2
118,302	-		IAI47_19445	0.22	+0.7
118,302	-		IAI47_19445	0.22	+1.0
118,302	-		IAI47_19445	0.22	+0.1
118,356	+		IAI47_19445	0.28	+0.1
118,356	+		IAI47_19445	0.28	+0.2
118,393	+		IAI47_19445	0.32	-1.0
118,393	+		IAI47_19445	0.32	+0.9
118,394	-		IAI47_19445	0.32	+0.6
118,477	+		IAI47_19445	0.41	-0.4
118,596	+		IAI47_19445	0.54	-0.6
118,596	+		IAI47_19445	0.54	+0.0
118,656	+		IAI47_19445	0.61	-0.9
118,656	+		IAI47_19445	0.61	-0.1
118,656	+		IAI47_19445	0.61	+0.0
118,657	-		IAI47_19445	0.61	-1.0
118,674	+		IAI47_19445	0.63	+2.2
118,674	+		IAI47_19445	0.63	-1.3
118,674	+		IAI47_19445	0.63	-0.2
118,674	+		IAI47_19445	0.63	-1.6
118,674	+		IAI47_19445	0.63	+1.8
118,674	+		IAI47_19445	0.63	+0.8
118,675	-		IAI47_19445	0.63	-0.1
118,675	-		IAI47_19445	0.63	+0.6
118,675	-		IAI47_19445	0.63	-0.7
118,681	+		IAI47_19445	0.64	+1.5
118,688	-		IAI47_19445	0.64	+0.5
118,765	+		IAI47_19445	0.73	+0.2
118,765	+		IAI47_19445	0.73	+0.5
118,765	+		IAI47_19445	0.73	-0.1
118,766	-		IAI47_19445	0.73	-1.7
118,766	-		IAI47_19445	0.73	+1.8
118,821	+		IAI47_19445	0.79	-0.7
118,822	-		IAI47_19445	0.79	+1.7
118,876	-		IAI47_19445	0.85	-0.2
118,902	-		IAI47_19445	0.88	-1.2
118,907	+		IAI47_19445	0.89	+0.9
118,907	+		IAI47_19445	0.89	+1.7
118,908	-		IAI47_19445	0.89	-1.4
118,908	-		IAI47_19445	0.89	+0.5
118,934	-				-0.5
118,934	-				-0.6
118,942	+				+1.5
118,943	-				-0.3
118,943	-				-0.3
118,951	+				+0.5
118,951	+				+1.8
118,951	+				+1.7
118,952	-				+0.4
118,952	-				+0.2
118,981	-				-1.5
118,981	-				-0.3
119,006	+				+0.6
119,006	+				-0.3
119,007	-				-1.1
119,016	-				-0.9
119,016	-				-0.1
119,028	+				+1.1
119,028	+				-0.1
119,028	+				+1.3
119,028	+				-0.3
119,028	+				-0.7
119,029	-				-1.4
119,046	+				-1.6
119,046	+				-1.1
119,046	+				+0.1
119,047	-				-0.7
119,047	-				+0.4
119,047	-				-0.1
119,047	-				+1.7
119,052	+				+1.9
119,052	+				-0.2
119,053	-				-1.1
119,053	-				-1.2
119,053	-				+2.5
119,079	+				-1.1
119,080	-				-1.5
119,080	-				-0.1
119,094	+				-1.3
119,094	+				+0.7
119,095	-				-1.9
119,139	+				+3.1
119,139	+				-0.6
119,139	+				+1.1
119,139	+				-0.5
119,139	+				+1.8
119,139	+				-0.8
119,139	+				-0.8
119,139	+				-0.8
119,140	-				-1.6
119,140	-				-1.1
119,140	-				-0.2
119,140	-				+0.7
119,207	-				+0.3
119,217	+				+2.1
119,217	+				+0.5
119,217	+				+1.3
119,218	-				-0.9
119,239	+				-0.8
119,240	-				+0.1
119,249	+				+0.1
119,250	-				-0.4
119,250	-				-0.4
119,274	+				-0.2
119,274	+				+0.5
119,275	-				-1.5
119,365	-		IAI47_19450	0.19	-0.9
119,385	+		IAI47_19450	0.22	-0.9
119,396	-		IAI47_19450	0.24	-0.4
119,423	+		IAI47_19450	0.28	-0.2
119,424	-		IAI47_19450	0.28	-1.6
119,541	+		IAI47_19450	0.46	+0.3
119,541	+		IAI47_19450	0.46	-0.3
119,542	-		IAI47_19450	0.46	-1.0
119,554	-		IAI47_19450	0.47	+0.9
119,577	-		IAI47_19450	0.51	+1.0
119,577	-		IAI47_19450	0.51	-0.7
119,577	-		IAI47_19450	0.51	-0.8
119,586	+		IAI47_19450	0.52	+0.5
119,586	+		IAI47_19450	0.52	+0.1
119,587	-		IAI47_19450	0.52	-0.3
119,597	-		IAI47_19450	0.54	+0.5
119,597	-		IAI47_19450	0.54	+0.4
119,597	-		IAI47_19450	0.54	-1.4
119,600	+		IAI47_19450	0.54	-0.2
119,600	+		IAI47_19450	0.54	-0.4
119,600	+		IAI47_19450	0.54	-0.2
119,600	+		IAI47_19450	0.54	-0.4
119,600	+		IAI47_19450	0.54	+0.7
119,600	+		IAI47_19450	0.54	+0.5
119,600	+		IAI47_19450	0.54	-1.2
119,600	+		IAI47_19450	0.54	-0.2
119,600	+		IAI47_19450	0.54	+1.7
119,600	+		IAI47_19450	0.54	-0.6
119,600	+		IAI47_19450	0.54	+0.7
119,601	-		IAI47_19450	0.54	+1.9
119,601	-		IAI47_19450	0.54	-2.4
119,601	-		IAI47_19450	0.54	-0.2
119,601	-		IAI47_19450	0.54	+0.7
119,601	-		IAI47_19450	0.54	-0.9
119,601	-		IAI47_19450	0.54	-0.8
119,601	-		IAI47_19450	0.54	-0.8
119,601	-		IAI47_19450	0.54	+1.5
119,601	-		IAI47_19450	0.54	-1.1
119,601	-		IAI47_19450	0.54	-0.6
119,601	-		IAI47_19450	0.54	-1.2
119,601	-		IAI47_19450	0.54	+2.5
119,601	-		IAI47_19450	0.54	-0.6
119,604	+		IAI47_19450	0.55	-1.5
119,604	+		IAI47_19450	0.55	-0.1
119,604	+		IAI47_19450	0.55	-0.6
119,604	+		IAI47_19450	0.55	+0.7
119,604	+		IAI47_19450	0.55	-0.2
119,604	+		IAI47_19450	0.55	-0.5
119,604	+		IAI47_19450	0.55	+0.7
119,604	+		IAI47_19450	0.55	-0.2
119,604	+		IAI47_19450	0.55	+1.6
119,604	+		IAI47_19450	0.55	-1.2
119,604	+		IAI47_19450	0.55	-1.1
119,604	+		IAI47_19450	0.55	+0.2
119,605	-		IAI47_19450	0.55	-2.2
119,605	-		IAI47_19450	0.55	+0.1
119,605	-		IAI47_19450	0.55	-1.7
119,605	-		IAI47_19450	0.55	+0.1
119,605	-				+0.7
119,605	-		IAI47_19450	0.55	+0.6
119,605	-		IAI47_19450	0.55	-0.2
119,605	-		IAI47_19450	0.55	+1.6
119,605	-		IAI47_19450	0.55	-0.4
119,605	-		IAI47_19450	0.55	+0.9
119,605	-		IAI47_19450	0.55	+0.9
119,606	+		IAI47_19450	0.55	+1.5
119,606	+		IAI47_19450	0.55	-1.1
119,606	+		IAI47_19450	0.55	+0.3
119,606	+		IAI47_19450	0.55	-0.3
119,607	-		IAI47_19450	0.55	+0.2
119,607	-		IAI47_19450	0.55	+0.2
119,607	-		IAI47_19450	0.55	-1.4
119,612	+		IAI47_19450	0.56	-1.6
119,613	-		IAI47_19450	0.56	+0.3
119,613	-		IAI47_19450	0.56	+0.2
119,662	+		IAI47_19450	0.64	-0.1
119,662	+		IAI47_19450	0.64	+0.3
119,730	-		IAI47_19450	0.74	-0.9
119,744	+		IAI47_19450	0.76	-0.5
119,744	+		IAI47_19450	0.76	-0.7
119,744	+		IAI47_19450	0.76	+1.6
119,744	+		IAI47_19450	0.76	-0.4
119,744	+		IAI47_19450	0.76	+0.4
119,744	+		IAI47_19450	0.76	-0.1
119,744	+		IAI47_19450	0.76	+0.8
119,744	+		IAI47_19450	0.76	-0.9
119,745	-		IAI47_19450	0.76	-0.7
119,745	-		IAI47_19450	0.76	+2.9
119,783	+		IAI47_19450	0.82	+1.0
119,783	+		IAI47_19450	0.82	-0.2
119,784	-		IAI47_19450	0.82	+0.3
119,835	+		IAI47_19450	0.89	-0.9
119,835	+		IAI47_19450	0.89	+0.8
119,835	+		IAI47_19450	0.89	+0.0
119,835	+		IAI47_19450	0.89	+0.1
119,835	+		IAI47_19450	0.89	+0.1
119,836	-		IAI47_19450	0.89	-0.2
119,836	-		IAI47_19450	0.89	-2.4
119,836	-		IAI47_19450	0.89	-0.4
119,836	-		IAI47_19450	0.89	+0.3
119,836	-		IAI47_19450	0.89	-0.3
119,837	+		IAI47_19450	0.90	+0.3
119,837	+		IAI47_19450	0.90	+0.4
119,837	+		IAI47_19450	0.90	-0.1
119,837	+		IAI47_19450	0.90	+0.2
119,837	+		IAI47_19450	0.90	-0.2
119,837	+		IAI47_19450	0.90	+2.7
119,837	+		IAI47_19450	0.90	+1.2
119,838	-		IAI47_19450	0.90	+0.9
119,838	-		IAI47_19450	0.90	+0.0
119,838	-		IAI47_19450	0.90	-1.0
119,838	-		IAI47_19450	0.90	-2.3
119,838	-		IAI47_19450	0.90	-1.2
119,838	-		IAI47_19450	0.90	-2.2
119,838	-		IAI47_19450	0.90	-1.7
119,889	+				-1.1
119,889	+				-0.5
119,890	-				-0.6
119,890	-				-0.5
119,904	+				-0.2
119,982	-				-0.4
119,989	+				+0.8
119,989	+				+0.6
120,008	+				-0.3
120,012	+				+1.1
120,012	+				+1.0
120,012	+				-0.4
120,013	-				+0.7
120,184	+		IAI47_19455	0.23	+1.1
120,184	+		IAI47_19455	0.23	+1.5
120,185	-		IAI47_19455	0.23	+0.9
120,236	+		IAI47_19455	0.29	-0.9
120,236	+		IAI47_19455	0.29	-0.1
120,236	+		IAI47_19455	0.29	+2.1
120,237	-		IAI47_19455	0.29	+1.9
120,261	-		IAI47_19455	0.32	+0.9
120,294	-		IAI47_19455	0.36	+0.3
120,345	+		IAI47_19455	0.42	-1.6
120,345	+		IAI47_19455	0.42	+0.0
120,345	+		IAI47_19455	0.42	-1.3
120,345	+		IAI47_19455	0.42	+0.3
120,345	+		IAI47_19455	0.42	-0.1
120,346	-		IAI47_19455	0.42	+0.5
120,346	-		IAI47_19455	0.42	+0.7
120,346	-		IAI47_19455	0.42	-1.0
120,346	-		IAI47_19455	0.42	+1.4
120,346	-		IAI47_19455	0.42	+0.1
120,349	+		IAI47_19455	0.42	-1.6
120,349	+		IAI47_19455	0.42	-0.5
120,358	+		IAI47_19455	0.43	+1.1
120,358	+		IAI47_19455	0.43	-0.6
120,359	-		IAI47_19455	0.44	+0.4
120,359	-		IAI47_19455	0.44	-0.5
120,359	-		IAI47_19455	0.44	+0.1
120,401	+		IAI47_19455	0.48	-0.1
120,402	-		IAI47_19455	0.49	+2.7
120,476	-		IAI47_19455	0.57	+0.7
120,506	+		IAI47_19455	0.61	-0.5
120,506	+		IAI47_19455	0.61	-0.8
120,506	+		IAI47_19455	0.61	-0.3
120,507	-		IAI47_19455	0.61	+0.3
120,507	-		IAI47_19455	0.61	-0.6
120,557	+		IAI47_19455	0.67	+1.4
120,557	+		IAI47_19455	0.67	-0.1
120,626	+		IAI47_19455	0.75	+1.3
120,626	+		IAI47_19455	0.75	-0.5
120,639	-		IAI47_19455	0.76	-1.3
120,639	-		IAI47_19455	0.76	-0.2
120,758	+				+3.1
120,758	+				+1.1
120,759	-				+1.6
120,760	+				+0.7
120,761	-				+2.7
120,811	-				-0.2
120,822	+				+1.1
120,822	+				-0.3
120,856	+				-0.3
120,856	+				-2.3
120,856	+				+0.1
120,856	+				+1.0
120,857	-				+0.8