Strain Fitness in Pantoea sp. MT58 around IAI47_19210

Experiment: Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50
68,368	+				-1.5
68,368	+				-0.6
68,369	-				+1.0
68,395	+				+0.1
68,396	-				+0.1
68,434	+				-1.0
68,434	+				+0.1
68,434	+				-2.6
68,435	-				-0.7
68,435	-				-0.9
68,435	-				+1.6
68,435	-				+2.2
68,435	-				+0.0
68,435	-				+2.1
68,435	-				-0.7
68,475	+				-0.6
68,475	+				+0.8
68,475	+				+1.6
68,476	-				-0.5
68,539	+		IAI47_19205	0.13	+0.7
68,539	+		IAI47_19205	0.13	+0.4
68,540	-		IAI47_19205	0.13	-0.4
68,610	+		IAI47_19205	0.22	-0.4
68,610	+		IAI47_19205	0.22	+0.1
68,610	+		IAI47_19205	0.22	-0.2
68,610	+		IAI47_19205	0.22	-0.5
68,611	-		IAI47_19205	0.22	-0.5
68,614	+		IAI47_19205	0.22	+0.2
68,614	+		IAI47_19205	0.22	+0.0
68,615	-		IAI47_19205	0.23	-1.1
68,639	+		IAI47_19205	0.26	-0.6
68,639	+		IAI47_19205	0.26	+0.1
68,639	+		IAI47_19205	0.26	-1.0
68,639	+		IAI47_19205	0.26	+1.1
68,639	+		IAI47_19205	0.26	-0.6
68,639	+		IAI47_19205	0.26	+0.5
68,639	+		IAI47_19205	0.26	-0.0
68,639	+		IAI47_19205	0.26	+1.2
68,639	+		IAI47_19205	0.26	-0.0
68,639	+		IAI47_19205	0.26	+0.8
68,640	-		IAI47_19205	0.26	-0.8
68,640	-		IAI47_19205	0.26	-0.4
68,640	-		IAI47_19205	0.26	-0.6
68,650	+		IAI47_19205	0.27	+0.2
68,650	+		IAI47_19205	0.27	+0.6
68,651	-		IAI47_19205	0.27	+0.6
68,700	+		IAI47_19205	0.33	+0.3
68,700	+		IAI47_19205	0.33	+0.8
68,700	+		IAI47_19205	0.33	+2.1
68,701	-		IAI47_19205	0.33	-0.3
68,701	-		IAI47_19205	0.33	+0.1
68,753	+		IAI47_19205	0.40	-0.3
68,754	-		IAI47_19205	0.40	+1.0
68,754	-		IAI47_19205	0.40	-0.1
68,757	+		IAI47_19205	0.41	+0.6
68,757	+		IAI47_19205	0.41	+0.2
68,757	+		IAI47_19205	0.41	+0.9
68,757	+		IAI47_19205	0.41	-1.1
68,757	+		IAI47_19205	0.41	+0.1
68,758	-		IAI47_19205	0.41	-0.1
68,758	-		IAI47_19205	0.41	+0.3
68,758	-		IAI47_19205	0.41	-1.2
68,766	+		IAI47_19205	0.42	-0.2
68,766	+		IAI47_19205	0.42	-0.0
68,766	+		IAI47_19205	0.42	-0.1
68,766	+		IAI47_19205	0.42	+0.7
68,845	-		IAI47_19205	0.52	+0.1
68,845	-		IAI47_19205	0.52	-0.6
68,870	+		IAI47_19205	0.55	+1.3
68,871	-		IAI47_19205	0.55	+0.5
68,878	+		IAI47_19205	0.56	-0.4
68,879	-		IAI47_19205	0.56	+1.1
68,882	+		IAI47_19205	0.56	-0.4
68,882	+		IAI47_19205	0.56	-0.1
68,883	-		IAI47_19205	0.57	-0.1
68,932	+		IAI47_19205	0.63	+0.3
68,932	+		IAI47_19205	0.63	+0.8
68,932	+		IAI47_19205	0.63	+0.9
68,933	-		IAI47_19205	0.63	-0.2
68,933	-		IAI47_19205	0.63	+1.3
68,933	-		IAI47_19205	0.63	-0.3
68,933	-		IAI47_19205	0.63	-1.5
68,933	-		IAI47_19205	0.63	+1.7
68,934	+		IAI47_19205	0.63	+0.1
68,934	+		IAI47_19205	0.63	+1.0
68,934	+		IAI47_19205	0.63	+1.5
68,934	+		IAI47_19205	0.63	-0.6
68,934	+		IAI47_19205	0.63	+1.6
68,935	-		IAI47_19205	0.63	+0.3
68,935	-		IAI47_19205	0.63	+0.7
68,935	-		IAI47_19205	0.63	+1.7
68,936	+		IAI47_19205	0.63	-0.9
68,936	+		IAI47_19205	0.63	+1.1
68,936	+		IAI47_19205	0.63	+0.6
68,936	+		IAI47_19205	0.63	-0.1
68,936	+		IAI47_19205	0.63	+0.8
68,936	+		IAI47_19205	0.63	-0.4
68,936	+		IAI47_19205	0.63	-0.2
68,936	+		IAI47_19205	0.63	+0.7
68,936	+		IAI47_19205	0.63	-0.2
68,937	-		IAI47_19205	0.63	+1.7
68,937	-		IAI47_19205	0.63	+0.4
68,937	-		IAI47_19205	0.63	-0.8
68,937	-		IAI47_19205	0.63	+1.4
68,937	-		IAI47_19205	0.63	-0.7
68,937	-		IAI47_19205	0.63	+1.1
68,937	-		IAI47_19205	0.63	-0.5
68,937	-		IAI47_19205	0.63	+0.1
68,937	-		IAI47_19205	0.63	+0.0
68,948	+		IAI47_19205	0.65	+3.7
68,977	-		IAI47_19205	0.69	+0.3
68,996	+		IAI47_19205	0.71	+1.8
68,996	+		IAI47_19205	0.71	+1.7
68,996	+		IAI47_19205	0.71	-0.7
68,997	-		IAI47_19205	0.71	-0.4
68,997	-		IAI47_19205	0.71	-0.2
69,086	+		IAI47_19205	0.82	+0.1
69,130	+		IAI47_19205	0.88	-0.6
69,149	-				-0.3
69,164	+				+1.5
69,164	+				-0.3
69,221	+				-0.5
69,221	+				+0.5
69,222	-				+0.9
69,242	-				+0.4
69,285	+				-0.1
69,285	+				+0.1
69,285	+				+0.9
69,286	-				+1.1
69,289	+				-0.1
69,296	+				+0.3
69,297	-				+0.6
69,308	+				-0.7
69,308	+				-0.1
69,309	-				+0.8
69,309	-				+0.1
69,309	-				+0.5
69,309	-				+0.1
69,318	+				+0.6
69,318	+				-0.1
69,318	+				-1.3
69,319	-				+0.9
69,403	+		IAI47_19210	0.18	-0.0
69,403	+		IAI47_19210	0.18	+0.5
69,404	-		IAI47_19210	0.18	+2.7
69,404	-		IAI47_19210	0.18	-1.0
69,454	+		IAI47_19210	0.38	+1.4
69,454	+		IAI47_19210	0.38	-0.1
69,454	+		IAI47_19210	0.38	-0.6
69,454	+		IAI47_19210	0.38	+0.1
69,455	-		IAI47_19210	0.39	+0.6
69,455	-		IAI47_19210	0.39	+1.0
69,455	-		IAI47_19210	0.39	+1.6
69,455	-		IAI47_19210	0.39	-0.4
69,456	+		IAI47_19210	0.39	+1.1
69,456	+		IAI47_19210	0.39	+0.7
69,456	+		IAI47_19210	0.39	+1.6
69,456	+		IAI47_19210	0.39	+2.4
69,457	-		IAI47_19210	0.39	-1.4
69,457	-		IAI47_19210	0.39	+0.0
69,481	+		IAI47_19210	0.49	+0.7
69,481	+		IAI47_19210	0.49	-0.3
69,481	+		IAI47_19210	0.49	-0.1
69,481	+		IAI47_19210	0.49	+0.0
69,481	+		IAI47_19210	0.49	-0.1
69,482	-		IAI47_19210	0.49	+0.2
69,482	-		IAI47_19210	0.49	+0.3
69,482	-		IAI47_19210	0.49	+1.2
69,482	-		IAI47_19210	0.49	+0.5
69,482	-		IAI47_19210	0.49	+1.0
69,482	-		IAI47_19210	0.49	+1.1
69,544	-		IAI47_19210	0.74	-0.7
69,544	-		IAI47_19210	0.74	+0.6
69,544	-		IAI47_19210	0.74	+0.1
69,544	-		IAI47_19210	0.74	+0.7
69,544	-		IAI47_19210	0.74	+0.6
69,559	+		IAI47_19210	0.80	+0.4
69,560	-		IAI47_19210	0.81	+0.0
69,560	-		IAI47_19210	0.81	-1.7
69,632	+				+0.7
69,633	-				-0.6
69,729	+				+1.0
69,729	+				+0.6
69,729	+				-0.4
69,729	+				-0.3
69,729	+				-0.4
69,730	-				+1.0
69,730	-				+1.7
69,730	-				+1.9
69,730	-				-0.5
69,730	-				+1.3
69,730	-				+0.1
69,735	+				+1.2
69,735	+				+0.3
69,735	+				-0.4
69,735	+				-0.4
69,735	+				+0.9
69,735	+				-1.4
69,735	+				-0.1
69,735	+				+2.1
69,735	+				-0.9
69,735	+				+0.7
69,736	-				+0.8
69,736	-				+0.8
69,736	-				+1.7
69,736	-				+0.0
69,736	-				-0.3
69,736	-				+1.2
69,736	-				+0.6
69,736	-				-0.4
69,737	+				+1.1
69,738	-				+1.5
69,738	-				+1.1
69,738	-				+0.0
69,752	+				-1.3
69,753	-				-1.7
69,753	-				-0.2
69,813	-				-0.4
69,836	+				+1.0
69,836	+				+0.7
69,841	+				+0.9
69,841	+				+0.9
69,842	-				+0.9
69,842	-				+1.8
69,842	-				-0.9
69,851	+				+0.2
69,909	-				+0.1
69,918	+				+0.5
69,918	+				+1.1
69,919	-				-1.7
69,940	-				+0.6
69,945	+				+1.1
69,945	+				+0.5
69,945	+				+0.6
69,946	-				-1.3
69,946	-				-2.8
69,988	+				+1.4
69,988	+				+0.9
69,989	-				+0.2
69,989	-				+0.9
70,108	+		IAI47_19215	0.18	+1.0
70,108	+		IAI47_19215	0.18	+0.8
70,109	-		IAI47_19215	0.18	+0.1
70,109	-		IAI47_19215	0.18	-0.7
70,109	-		IAI47_19215	0.18	-0.5
70,109	-		IAI47_19215	0.18	+1.3
70,109	-		IAI47_19215	0.18	-1.3
70,178	-		IAI47_19215	0.25	-0.6
70,178	-		IAI47_19215	0.25	-0.6
70,178	-		IAI47_19215	0.25	-0.9
70,178	-		IAI47_19215	0.25	-1.3
70,208	+		IAI47_19215	0.28	+1.7
70,209	-		IAI47_19215	0.28	-0.4
70,261	-		IAI47_19215	0.34	-0.8
70,270	+		IAI47_19215	0.35	+1.6
70,271	-		IAI47_19215	0.35	+1.7
70,271	-		IAI47_19215	0.35	-0.3
70,282	+		IAI47_19215	0.36	+0.5
70,283	-		IAI47_19215	0.36	-2.3
70,325	+		IAI47_19215	0.40	-1.5
70,326	-		IAI47_19215	0.40	-1.1
70,326	-		IAI47_19215	0.40	+1.1
70,326	-		IAI47_19215	0.40	-0.0
70,328	+		IAI47_19215	0.41	+1.3
70,329	-		IAI47_19215	0.41	-1.2
70,403	+		IAI47_19215	0.48	+0.4
70,403	+		IAI47_19215	0.48	+1.2
70,473	+		IAI47_19215	0.55	+2.1
70,473	+		IAI47_19215	0.55	+2.2
70,473	+		IAI47_19215	0.55	+0.9
70,473	+		IAI47_19215	0.55	+2.2
70,473	+		IAI47_19215	0.55	+3.9
70,473	+		IAI47_19215	0.55	+0.7
70,473	+		IAI47_19215	0.55	+1.6
70,473	+		IAI47_19215	0.55	-0.1
70,473	+		IAI47_19215	0.55	+0.5
70,473	+		IAI47_19215	0.55	+1.2
70,473	+		IAI47_19215	0.55	+0.6
70,473	+		IAI47_19215	0.55	+0.2
70,473	+		IAI47_19215	0.55	+0.0
70,473	+		IAI47_19215	0.55	+0.6
70,474	-		IAI47_19215	0.56	+0.6
70,474	-		IAI47_19215	0.56	-1.4
70,474	-		IAI47_19215	0.56	-1.1
70,474	-		IAI47_19215	0.56	-1.6
70,474	-		IAI47_19215	0.56	+1.3
70,474	-		IAI47_19215	0.56	-0.3
70,474	-		IAI47_19215	0.56	-0.7
70,474	-		IAI47_19215	0.56	+0.8
70,474	-		IAI47_19215	0.56	-0.2
70,474	-		IAI47_19215	0.56	+0.7
70,474	-		IAI47_19215	0.56	+0.4
70,474	-		IAI47_19215	0.56	-0.8
70,474	-		IAI47_19215	0.56	+0.8
70,474	-		IAI47_19215	0.56	-1.1
70,474	-		IAI47_19215	0.56	+0.9
70,474	-		IAI47_19215	0.56	+0.2
70,474	-		IAI47_19215	0.56	-0.1
70,474	-		IAI47_19215	0.56	+1.1
70,477	+		IAI47_19215	0.56	+0.3
70,477	+		IAI47_19215	0.56	+1.1
70,477	+		IAI47_19215	0.56	+1.3
70,477	+		IAI47_19215	0.56	+1.0
70,477	+		IAI47_19215	0.56	+0.1
70,478	-		IAI47_19215	0.56	-1.1
70,478	-		IAI47_19215	0.56	-0.1
70,478	-		IAI47_19215	0.56	-1.6
70,478	-		IAI47_19215	0.56	-0.4
70,478	-		IAI47_19215	0.56	+1.0
70,478	-		IAI47_19215	0.56	+0.2
70,478	-		IAI47_19215	0.56	+1.7
70,478	-		IAI47_19215	0.56	+1.9
70,478	-		IAI47_19215	0.56	+1.4
70,478	-		IAI47_19215	0.56	-1.2
70,478	-		IAI47_19215	0.56	-1.7
70,555	+		IAI47_19215	0.64	-0.1
70,555	+		IAI47_19215	0.64	-0.5
70,555	+		IAI47_19215	0.64	+3.5
70,555	+		IAI47_19215	0.64	-1.0
70,556	-		IAI47_19215	0.64	+0.7
70,558	+		IAI47_19215	0.64	+0.2
70,558	+		IAI47_19215	0.64	+0.0
70,558	+		IAI47_19215	0.64	+1.4
70,558	+		IAI47_19215	0.64	+1.0
70,559	-		IAI47_19215	0.64	+1.0