Strain Fitness in Pantoea sp. MT58 around IAI47_11330

Experiment: Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50
2,392,480	+				-0.4
2,392,481	-				-1.2
2,392,511	+				-1.4
2,392,512	-				+0.7
2,392,512	-				-1.4
2,392,636	-		IAI47_11325	0.21	+0.4
2,392,686	-		IAI47_11325	0.26	-1.9
2,392,841	+		IAI47_11325	0.41	-1.6
2,392,842	-		IAI47_11325	0.41	-0.1
2,392,877	+		IAI47_11325	0.44	+0.2
2,392,987	+		IAI47_11325	0.55	-0.3
2,392,993	+		IAI47_11325	0.55	-1.0
2,392,993	+		IAI47_11325	0.55	+0.2
2,392,994	-		IAI47_11325	0.55	+1.3
2,392,994	-		IAI47_11325	0.55	-0.2
2,393,081	-		IAI47_11325	0.64	+0.7
2,393,081	-		IAI47_11325	0.64	+1.4
2,393,125	+		IAI47_11325	0.68	-0.3
2,393,126	-		IAI47_11325	0.68	-0.5
2,393,152	+		IAI47_11325	0.70	+0.0
2,393,152	+		IAI47_11325	0.70	-0.3
2,393,152	+		IAI47_11325	0.70	+1.1
2,393,153	-		IAI47_11325	0.70	-0.1
2,393,153	-		IAI47_11325	0.70	+0.0
2,393,328	+		IAI47_11325	0.87	+1.7
2,393,328	+		IAI47_11325	0.87	-1.2
2,393,328	+		IAI47_11325	0.87	-0.8
2,393,328	+		IAI47_11325	0.87	-1.1
2,393,329	-		IAI47_11325	0.87	-0.9
2,393,329	-		IAI47_11325	0.87	+0.2
2,393,368	+				+0.8
2,393,369	-				-0.1
2,393,369	-				+0.5
2,393,369	-				+2.9
2,393,444	+				-0.1
2,393,444	+				+1.7
2,393,444	+				+1.7
2,393,445	-				-0.5
2,393,445	-				+1.3
2,393,445	-				-0.1
2,393,445	-				+0.7
2,393,445	-				-0.6
2,393,454	+				-0.5
2,393,454	+				+1.3
2,393,454	+				-0.2
2,393,455	-				+1.5
2,393,491	-				-0.3
2,393,557	+		IAI47_11330	0.11	-1.5
2,393,557	+		IAI47_11330	0.11	+0.5
2,393,557	+		IAI47_11330	0.11	+1.6
2,393,558	-		IAI47_11330	0.11	+0.2
2,393,610	+		IAI47_11330	0.16	-1.0
2,393,610	+		IAI47_11330	0.16	+1.0
2,393,611	-		IAI47_11330	0.17	+0.5
2,393,653	-		IAI47_11330	0.21	+1.6
2,393,685	+		IAI47_11330	0.25	+0.2
2,393,685	+		IAI47_11330	0.25	-0.3
2,393,701	-		IAI47_11330	0.27	+0.3
2,393,701	-		IAI47_11330	0.27	+0.3
2,393,713	+		IAI47_11330	0.28	-0.4
2,393,714	-		IAI47_11330	0.28	-1.0
2,393,714	-		IAI47_11330	0.28	+0.6
2,393,714	-		IAI47_11330	0.28	-1.3
2,393,752	-		IAI47_11330	0.33	+0.4
2,393,752	-		IAI47_11330	0.33	-0.4
2,393,752	-		IAI47_11330	0.33	-1.6
2,393,795	+		IAI47_11330	0.37	+0.3
2,393,795	+		IAI47_11330	0.37	-0.4
2,393,795	+		IAI47_11330	0.37	+0.2
2,393,795	+		IAI47_11330	0.37	+0.3
2,393,796	-		IAI47_11330	0.38	-0.3
2,393,796	-		IAI47_11330	0.38	-2.0
2,393,796	-		IAI47_11330	0.38	-0.1
2,393,796	-		IAI47_11330	0.38	+0.6
2,393,845	+		IAI47_11330	0.43	-1.6
2,393,846	-		IAI47_11330	0.43	+1.3
2,393,860	+		IAI47_11330	0.45	+1.0
2,393,874	+		IAI47_11330	0.46	+0.7
2,393,947	+		IAI47_11330	0.55	-1.0
2,393,948	-		IAI47_11330	0.55	-2.2
2,393,948	-		IAI47_11330	0.55	-0.9
2,393,948	-		IAI47_11330	0.55	+0.2
2,393,976	+		IAI47_11330	0.58	-1.5
2,393,976	+		IAI47_11330	0.58	+1.0
2,393,976	+		IAI47_11330	0.58	+0.7
2,393,977	-		IAI47_11330	0.58	+1.4
2,393,977	-		IAI47_11330	0.58	+1.6
2,393,977	-		IAI47_11330	0.58	+0.0
2,393,977	-		IAI47_11330	0.58	-1.3
2,393,977	-		IAI47_11330	0.58	+1.4
2,393,977	-		IAI47_11330	0.58	-0.7
2,393,977	-		IAI47_11330	0.58	+0.9
2,393,977	-		IAI47_11330	0.58	+0.0
2,393,977	-		IAI47_11330	0.58	+0.1
2,393,977	-		IAI47_11330	0.58	+0.8
2,394,007	+		IAI47_11330	0.61	+0.0
2,394,062	+		IAI47_11330	0.68	-1.0
2,394,062	+		IAI47_11330	0.68	-1.6
2,394,062	+		IAI47_11330	0.68	-0.8
2,394,063	-		IAI47_11330	0.68	+0.6
2,394,063	-		IAI47_11330	0.68	-0.3
2,394,063	-		IAI47_11330	0.68	+0.3
2,394,063	-		IAI47_11330	0.68	+0.0
2,394,083	+		IAI47_11330	0.70	-1.3
2,394,083	+		IAI47_11330	0.70	-0.1
2,394,083	+		IAI47_11330	0.70	-0.3
2,394,083	+		IAI47_11330	0.70	-0.6
2,394,084	-		IAI47_11330	0.70	-0.4
2,394,084	-		IAI47_11330	0.70	+0.5
2,394,087	+		IAI47_11330	0.70	-0.5
2,394,087	+		IAI47_11330	0.70	-0.9
2,394,087	+		IAI47_11330	0.70	+0.5
2,394,087	+		IAI47_11330	0.70	+0.5
2,394,088	-		IAI47_11330	0.71	+0.1
2,394,088	-		IAI47_11330	0.71	+0.3
2,394,180	+		IAI47_11330	0.81	+1.6
2,394,180	+		IAI47_11330	0.81	-0.6
2,394,180	+		IAI47_11330	0.81	+0.4
2,394,180	+		IAI47_11330	0.81	-0.4
2,394,181	-		IAI47_11330	0.81	+0.8
2,394,181	-		IAI47_11330	0.81	-0.2
2,394,267	+				-0.3
2,394,342	+				+0.2
2,394,380	+				+0.6
2,394,380	+				-1.0
2,394,384	+				-0.8
2,394,385	-				+0.5
2,394,391	+				-1.7
2,394,391	+				-0.2
2,394,413	+				+0.6
2,394,413	+				-2.2
2,394,422	+				+0.4
2,394,423	-				+2.8
2,394,495	+		IAI47_11335	0.16	-2.1
2,394,504	+		IAI47_11335	0.17	+0.3
2,394,581	+		IAI47_11335	0.25	-0.1
2,394,581	+		IAI47_11335	0.25	-2.4
2,394,581	+		IAI47_11335	0.25	+0.3
2,394,582	-		IAI47_11335	0.25	+1.5
2,394,582	-		IAI47_11335	0.25	+0.7
2,394,624	+		IAI47_11335	0.30	-0.3
2,394,625	-		IAI47_11335	0.30	-0.9
2,394,667	+		IAI47_11335	0.35	-0.6
2,394,667	+		IAI47_11335	0.35	-0.5
2,394,667	+		IAI47_11335	0.35	-0.8
2,394,762	-		IAI47_11335	0.45	-0.6
2,394,776	+		IAI47_11335	0.46	-1.8
2,394,777	-		IAI47_11335	0.46	+1.5
2,394,824	+		IAI47_11335	0.51	-1.4
2,394,824	+		IAI47_11335	0.51	+0.6
2,394,824	+		IAI47_11335	0.51	-0.6
2,394,825	-		IAI47_11335	0.51	-1.4
2,394,825	-		IAI47_11335	0.51	-1.1
2,394,933	+		IAI47_11335	0.63	+1.8
2,394,933	+		IAI47_11335	0.63	-0.3
2,394,934	-		IAI47_11335	0.63	+0.6
2,394,934	-		IAI47_11335	0.63	+1.2
2,394,959	+		IAI47_11335	0.66	+0.0
2,394,959	+		IAI47_11335	0.66	-1.4
2,394,959	+		IAI47_11335	0.66	-0.4
2,394,969	+		IAI47_11335	0.67	+0.8
2,394,970	-		IAI47_11335	0.67	+1.1
2,394,992	+		IAI47_11335	0.69	+2.3
2,394,993	-		IAI47_11335	0.69	+1.5
2,395,036	+		IAI47_11335	0.74	+0.7
2,395,036	+		IAI47_11335	0.74	+0.7
2,395,036	+		IAI47_11335	0.74	+0.0
2,395,037	-		IAI47_11335	0.74	+1.0
2,395,037	-		IAI47_11335	0.74	+0.4
2,395,084	+		IAI47_11335	0.79	-0.9
2,395,084	+		IAI47_11335	0.79	-0.0
2,395,085	-		IAI47_11335	0.79	-0.5
2,395,107	-		IAI47_11335	0.82	-1.1
2,395,165	+		IAI47_11335	0.88	+1.0
2,395,165	+		IAI47_11335	0.88	-0.8
2,395,200	-				-0.8
2,395,200	-				-0.3
2,395,209	+				-0.6
2,395,251	+				-1.1
2,395,267	+				+0.5
2,395,267	+				+0.7
2,395,267	+				-1.6
2,395,267	+				-1.0
2,395,267	+				+0.5
2,395,267	+				+0.5
2,395,267	+				+0.3
2,395,267	+				+1.4
2,395,267	+				+0.5
2,395,268	-				-0.7
2,395,268	-				+0.1
2,395,268	-				+1.2
2,395,268	-				+0.4
2,395,268	-				-1.4