Experiment: Fusidic 0.5 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS22405 and BWI76_RS22410 are separated by 23 nucleotides BWI76_RS22410 and BWI76_RS22415 are separated by 207 nucleotides
BWI76_RS22405: BWI76_RS22405 - PTS cellobiose transporter subunit IIC, at 4,672,180 to 4,673,502
_RS22405
BWI76_RS22410: BWI76_RS22410 - PTS lactose/cellobiose transporter subunit IIA, at 4,673,526 to 4,673,840
_RS22410
BWI76_RS22415: BWI76_RS22415 - transcriptional regulator, at 4,674,048 to 4,674,962
_RS22415
Position (kb)
4673
4674 Strain fitness (log2 ratio)
-1
0
1
2 at 4672.614 kb on - strand, within BWI76_RS22405 at 4673.031 kb on - strand, within BWI76_RS22405 at 4673.243 kb on + strand, within BWI76_RS22405 at 4673.258 kb on + strand, within BWI76_RS22405 at 4673.374 kb on + strand at 4673.511 kb on + strand at 4673.603 kb on - strand, within BWI76_RS22410 at 4673.605 kb on + strand, within BWI76_RS22410 at 4673.613 kb on - strand, within BWI76_RS22410 at 4673.778 kb on - strand, within BWI76_RS22410 at 4673.851 kb on + strand at 4673.938 kb on + strand at 4674.152 kb on - strand, within BWI76_RS22415 at 4674.162 kb on - strand at 4674.188 kb on + strand, within BWI76_RS22415 at 4674.196 kb on - strand, within BWI76_RS22415 at 4674.242 kb on + strand, within BWI76_RS22415 at 4674.381 kb on - strand, within BWI76_RS22415 at 4674.629 kb on + strand, within BWI76_RS22415 at 4674.744 kb on - strand, within BWI76_RS22415 at 4674.794 kb on + strand, within BWI76_RS22415 at 4674.802 kb on - strand, within BWI76_RS22415 at 4674.832 kb on - strand, within BWI76_RS22415
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 0.5 mg/ml remove 4,672,614 - BWI76_RS22405 0.33 +0.1 4,673,031 - BWI76_RS22405 0.64 -0.1 4,673,243 + BWI76_RS22405 0.80 +0.4 4,673,258 + BWI76_RS22405 0.81 -0.0 4,673,374 + +0.7 4,673,511 + -0.3 4,673,603 - BWI76_RS22410 0.24 +0.6 4,673,605 + BWI76_RS22410 0.25 +1.0 4,673,613 - BWI76_RS22410 0.28 -0.6 4,673,778 - BWI76_RS22410 0.80 +0.5 4,673,851 + +0.7 4,673,938 + -0.3 4,674,152 - BWI76_RS22415 0.11 -0.2 4,674,162 - +2.5 4,674,188 + BWI76_RS22415 0.15 +0.4 4,674,196 - BWI76_RS22415 0.16 -0.2 4,674,242 + BWI76_RS22415 0.21 -0.3 4,674,381 - BWI76_RS22415 0.36 -0.8 4,674,629 + BWI76_RS22415 0.63 +0.1 4,674,744 - BWI76_RS22415 0.76 -0.2 4,674,794 + BWI76_RS22415 0.82 +0.7 4,674,802 - BWI76_RS22415 0.82 +0.5 4,674,832 - BWI76_RS22415 0.86 -0.2
Or see this region's nucleotide sequence