Experiment: Fusidic 0.5 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS16515 and BWI76_RS16520 are separated by 111 nucleotides BWI76_RS16520 and BWI76_RS16525 are separated by 298 nucleotides
BWI76_RS16515: BWI76_RS16515 - LysR family transcriptional regulator, at 3,423,546 to 3,424,457
_RS16515
BWI76_RS16520: BWI76_RS16520 - Bcr/CflA family multidrug efflux MFS transporter, at 3,424,569 to 3,425,753
_RS16520
BWI76_RS16525: BWI76_RS16525 - cyclopropane-fatty-acyl-phospholipid synthase, at 3,426,052 to 3,427,203
_RS16525
Position (kb)
3424
3425
3426 Strain fitness (log2 ratio)
-1
0
1 at 3423.615 kb on - strand at 3423.615 kb on - strand at 3423.853 kb on + strand, within BWI76_RS16515 at 3424.076 kb on + strand, within BWI76_RS16515 at 3424.390 kb on - strand at 3424.511 kb on + strand at 3424.518 kb on - strand at 3424.519 kb on - strand at 3424.519 kb on - strand at 3424.523 kb on + strand at 3424.530 kb on - strand at 3424.934 kb on + strand, within BWI76_RS16520 at 3425.036 kb on - strand, within BWI76_RS16520 at 3425.116 kb on - strand, within BWI76_RS16520 at 3425.209 kb on - strand, within BWI76_RS16520 at 3425.305 kb on - strand, within BWI76_RS16520 at 3425.341 kb on - strand, within BWI76_RS16520 at 3425.439 kb on + strand, within BWI76_RS16520 at 3425.672 kb on + strand at 3425.711 kb on + strand at 3425.711 kb on + strand at 3425.747 kb on + strand at 3425.937 kb on + strand at 3426.013 kb on + strand at 3426.013 kb on + strand at 3426.214 kb on + strand, within BWI76_RS16525 at 3426.658 kb on - strand, within BWI76_RS16525
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 0.5 mg/ml remove 3,423,615 - -0.0 3,423,615 - -0.3 3,423,853 + BWI76_RS16515 0.34 -0.3 3,424,076 + BWI76_RS16515 0.58 +0.1 3,424,390 - -0.9 3,424,511 + -0.1 3,424,518 - -0.8 3,424,519 - -0.1 3,424,519 - -0.5 3,424,523 + -0.3 3,424,530 - -0.1 3,424,934 + BWI76_RS16520 0.31 +0.9 3,425,036 - BWI76_RS16520 0.39 -0.5 3,425,116 - BWI76_RS16520 0.46 +0.6 3,425,209 - BWI76_RS16520 0.54 +0.5 3,425,305 - BWI76_RS16520 0.62 -0.2 3,425,341 - BWI76_RS16520 0.65 +0.8 3,425,439 + BWI76_RS16520 0.73 +0.4 3,425,672 + -0.5 3,425,711 + -0.7 3,425,711 + +0.4 3,425,747 + -0.3 3,425,937 + -0.8 3,426,013 + +0.5 3,426,013 + +0.4 3,426,214 + BWI76_RS16525 0.14 -0.3 3,426,658 - BWI76_RS16525 0.53 -0.3
Or see this region's nucleotide sequence