Experiment: Fusidic 0.5 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS14100 and BWI76_RS14105 are separated by 120 nucleotides BWI76_RS14105 and BWI76_RS14110 are separated by 104 nucleotides BWI76_RS14110 and BWI76_RS14115 are separated by 79 nucleotides BWI76_RS14115 and BWI76_RS14120 are separated by 317 nucleotides BWI76_RS14120 and BWI76_RS14125 are separated by 50 nucleotides
BWI76_RS14100: BWI76_RS14100 - diguanylate phosphodiesterase, at 2,947,369 to 2,948,907
_RS14100
BWI76_RS14105: BWI76_RS14105 - NADH:ubiquinone reductase (Na(+)-transporting) subunit E, at 2,949,028 to 2,949,639
_RS14105
BWI76_RS14110: BWI76_RS14110 - C-lysozyme inhibitor, at 2,949,744 to 2,950,187
_RS14110
BWI76_RS14115: BWI76_RS14115 - YqaE/Pmp3 family membrane protein, at 2,950,267 to 2,950,428
_RS14115
BWI76_RS14120: BWI76_RS14120 - hypothetical protein, at 2,950,746 to 2,950,976
_RS14120
BWI76_RS14125: BWI76_RS14125 - SDR family oxidoreductase, at 2,951,027 to 2,951,911
_RS14125
Position (kb)
2949
2950
2951 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2948.756 kb on - strand at 2948.776 kb on + strand at 2948.804 kb on + strand at 2948.812 kb on - strand at 2948.821 kb on + strand at 2948.822 kb on - strand at 2948.828 kb on - strand at 2948.829 kb on - strand at 2948.879 kb on + strand at 2948.887 kb on - strand at 2948.902 kb on - strand at 2948.906 kb on + strand at 2948.959 kb on + strand at 2949.018 kb on + strand at 2949.021 kb on + strand at 2949.034 kb on - strand at 2949.035 kb on - strand at 2949.035 kb on - strand at 2949.040 kb on - strand at 2949.082 kb on + strand at 2949.125 kb on - strand, within BWI76_RS14105 at 2949.175 kb on - strand, within BWI76_RS14105 at 2949.186 kb on + strand, within BWI76_RS14105 at 2949.271 kb on - strand, within BWI76_RS14105 at 2949.318 kb on - strand, within BWI76_RS14105 at 2949.443 kb on - strand, within BWI76_RS14105 at 2949.489 kb on - strand, within BWI76_RS14105 at 2949.850 kb on - strand, within BWI76_RS14110 at 2949.850 kb on - strand, within BWI76_RS14110 at 2949.850 kb on - strand, within BWI76_RS14110 at 2949.962 kb on - strand, within BWI76_RS14110 at 2950.045 kb on - strand, within BWI76_RS14110 at 2950.123 kb on - strand, within BWI76_RS14110 at 2950.186 kb on - strand at 2950.197 kb on - strand at 2950.197 kb on - strand at 2950.197 kb on - strand at 2950.258 kb on - strand at 2950.313 kb on - strand, within BWI76_RS14115 at 2950.313 kb on - strand at 2950.313 kb on - strand, within BWI76_RS14115 at 2950.357 kb on + strand, within BWI76_RS14115 at 2950.363 kb on + strand, within BWI76_RS14115 at 2950.363 kb on + strand, within BWI76_RS14115 at 2950.365 kb on - strand, within BWI76_RS14115 at 2950.365 kb on - strand, within BWI76_RS14115 at 2950.371 kb on - strand, within BWI76_RS14115 at 2950.371 kb on - strand, within BWI76_RS14115 at 2950.371 kb on - strand, within BWI76_RS14115 at 2950.371 kb on - strand, within BWI76_RS14115 at 2950.371 kb on - strand, within BWI76_RS14115 at 2950.371 kb on - strand, within BWI76_RS14115 at 2950.372 kb on - strand, within BWI76_RS14115 at 2950.372 kb on - strand, within BWI76_RS14115 at 2950.372 kb on - strand, within BWI76_RS14115 at 2950.372 kb on - strand, within BWI76_RS14115 at 2950.372 kb on - strand, within BWI76_RS14115 at 2950.372 kb on - strand, within BWI76_RS14115 at 2950.372 kb on - strand, within BWI76_RS14115 at 2950.372 kb on - strand, within BWI76_RS14115 at 2950.372 kb on - strand, within BWI76_RS14115 at 2950.372 kb on - strand, within BWI76_RS14115 at 2950.372 kb on - strand, within BWI76_RS14115 at 2950.372 kb on - strand, within BWI76_RS14115 at 2950.372 kb on - strand, within BWI76_RS14115 at 2950.372 kb on - strand, within BWI76_RS14115 at 2950.372 kb on - strand, within BWI76_RS14115 at 2950.372 kb on - strand, within BWI76_RS14115 at 2950.372 kb on - strand, within BWI76_RS14115 at 2950.372 kb on - strand, within BWI76_RS14115 at 2950.372 kb on - strand, within BWI76_RS14115 at 2950.372 kb on - strand, within BWI76_RS14115 at 2950.375 kb on - strand, within BWI76_RS14115 at 2950.382 kb on - strand, within BWI76_RS14115 at 2950.382 kb on - strand, within BWI76_RS14115 at 2950.382 kb on - strand, within BWI76_RS14115 at 2950.382 kb on - strand, within BWI76_RS14115 at 2950.438 kb on - strand at 2950.461 kb on - strand at 2950.595 kb on - strand at 2950.629 kb on + strand at 2950.631 kb on + strand at 2950.631 kb on + strand at 2950.639 kb on - strand at 2950.647 kb on + strand at 2950.666 kb on + strand at 2950.673 kb on + strand at 2950.673 kb on + strand at 2950.673 kb on + strand at 2950.689 kb on + strand at 2950.697 kb on - strand at 2950.717 kb on + strand at 2950.751 kb on - strand at 2950.753 kb on + strand at 2950.753 kb on + strand at 2950.763 kb on + strand at 2950.771 kb on - strand, within BWI76_RS14120 at 2950.785 kb on + strand, within BWI76_RS14120 at 2950.800 kb on + strand, within BWI76_RS14120 at 2950.800 kb on + strand, within BWI76_RS14120 at 2950.808 kb on - strand, within BWI76_RS14120 at 2950.808 kb on - strand, within BWI76_RS14120 at 2950.808 kb on - strand, within BWI76_RS14120 at 2950.809 kb on + strand, within BWI76_RS14120 at 2950.809 kb on + strand, within BWI76_RS14120 at 2950.831 kb on + strand, within BWI76_RS14120 at 2950.837 kb on + strand, within BWI76_RS14120 at 2950.837 kb on + strand, within BWI76_RS14120 at 2950.901 kb on + strand, within BWI76_RS14120 at 2950.904 kb on + strand, within BWI76_RS14120 at 2950.909 kb on - strand, within BWI76_RS14120 at 2951.063 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 0.5 mg/ml remove 2,948,756 - -0.3 2,948,776 + +0.3 2,948,804 + +0.5 2,948,812 - -1.4 2,948,821 + +0.6 2,948,822 - -1.3 2,948,828 - +1.9 2,948,829 - -0.2 2,948,879 + -0.4 2,948,887 - +0.9 2,948,902 - -0.5 2,948,906 + +2.5 2,948,959 + +1.5 2,949,018 + +0.7 2,949,021 + -0.7 2,949,034 - +0.4 2,949,035 - -0.2 2,949,035 - -0.1 2,949,040 - -0.4 2,949,082 + -1.1 2,949,125 - BWI76_RS14105 0.16 -0.4 2,949,175 - BWI76_RS14105 0.24 +0.4 2,949,186 + BWI76_RS14105 0.26 +0.1 2,949,271 - BWI76_RS14105 0.40 -0.1 2,949,318 - BWI76_RS14105 0.47 +0.4 2,949,443 - BWI76_RS14105 0.68 -1.4 2,949,489 - BWI76_RS14105 0.75 -2.3 2,949,850 - BWI76_RS14110 0.24 +0.8 2,949,850 - BWI76_RS14110 0.24 +1.3 2,949,850 - BWI76_RS14110 0.24 +1.7 2,949,962 - BWI76_RS14110 0.49 +0.2 2,950,045 - BWI76_RS14110 0.68 -0.7 2,950,123 - BWI76_RS14110 0.85 -0.2 2,950,186 - -0.8 2,950,197 - -0.5 2,950,197 - -1.1 2,950,197 - +0.3 2,950,258 - +0.3 2,950,313 - BWI76_RS14115 0.28 -0.6 2,950,313 - +1.9 2,950,313 - BWI76_RS14115 0.28 +0.5 2,950,357 + BWI76_RS14115 0.56 +0.6 2,950,363 + BWI76_RS14115 0.59 -0.1 2,950,363 + BWI76_RS14115 0.59 +0.1 2,950,365 - BWI76_RS14115 0.60 +0.5 2,950,365 - BWI76_RS14115 0.60 +0.0 2,950,371 - BWI76_RS14115 0.64 -0.1 2,950,371 - BWI76_RS14115 0.64 -0.5 2,950,371 - BWI76_RS14115 0.64 -0.1 2,950,371 - BWI76_RS14115 0.64 +0.6 2,950,371 - BWI76_RS14115 0.64 +0.0 2,950,371 - BWI76_RS14115 0.64 +0.3 2,950,372 - BWI76_RS14115 0.65 +0.7 2,950,372 - BWI76_RS14115 0.65 -1.0 2,950,372 - BWI76_RS14115 0.65 +0.7 2,950,372 - BWI76_RS14115 0.65 -0.6 2,950,372 - BWI76_RS14115 0.65 +0.3 2,950,372 - BWI76_RS14115 0.65 +0.4 2,950,372 - BWI76_RS14115 0.65 -0.2 2,950,372 - BWI76_RS14115 0.65 +0.6 2,950,372 - BWI76_RS14115 0.65 +0.7 2,950,372 - BWI76_RS14115 0.65 -1.2 2,950,372 - BWI76_RS14115 0.65 -0.0 2,950,372 - BWI76_RS14115 0.65 -1.1 2,950,372 - BWI76_RS14115 0.65 -0.2 2,950,372 - BWI76_RS14115 0.65 +0.7 2,950,372 - BWI76_RS14115 0.65 -1.1 2,950,372 - BWI76_RS14115 0.65 -0.2 2,950,372 - BWI76_RS14115 0.65 +0.1 2,950,372 - BWI76_RS14115 0.65 -0.2 2,950,372 - BWI76_RS14115 0.65 +0.8 2,950,372 - BWI76_RS14115 0.65 -0.4 2,950,375 - BWI76_RS14115 0.67 -0.2 2,950,382 - BWI76_RS14115 0.71 +0.7 2,950,382 - BWI76_RS14115 0.71 -1.7 2,950,382 - BWI76_RS14115 0.71 +0.3 2,950,382 - BWI76_RS14115 0.71 -0.9 2,950,438 - -0.2 2,950,461 - -0.9 2,950,595 - -2.5 2,950,629 + -0.4 2,950,631 + +1.2 2,950,631 + -0.5 2,950,639 - +0.3 2,950,647 + +0.3 2,950,666 + -0.2 2,950,673 + -0.3 2,950,673 + -0.0 2,950,673 + +0.1 2,950,689 + -0.8 2,950,697 - -0.1 2,950,717 + +0.4 2,950,751 - -0.1 2,950,753 + -0.7 2,950,753 + +0.5 2,950,763 + +0.4 2,950,771 - BWI76_RS14120 0.11 -0.5 2,950,785 + BWI76_RS14120 0.17 +0.1 2,950,800 + BWI76_RS14120 0.23 -0.7 2,950,800 + BWI76_RS14120 0.23 +0.7 2,950,808 - BWI76_RS14120 0.27 +0.3 2,950,808 - BWI76_RS14120 0.27 +0.3 2,950,808 - BWI76_RS14120 0.27 -0.5 2,950,809 + BWI76_RS14120 0.27 +0.1 2,950,809 + BWI76_RS14120 0.27 +0.4 2,950,831 + BWI76_RS14120 0.37 -0.3 2,950,837 + BWI76_RS14120 0.39 +0.1 2,950,837 + BWI76_RS14120 0.39 +0.6 2,950,901 + BWI76_RS14120 0.67 -1.1 2,950,904 + BWI76_RS14120 0.68 -0.1 2,950,909 - BWI76_RS14120 0.71 +0.9 2,951,063 - +0.8
Or see this region's nucleotide sequence