Experiment: Fusidic 0.5 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS08770 and BWI76_RS08775 overlap by 8 nucleotides BWI76_RS08775 and BWI76_RS08780 overlap by 59 nucleotides BWI76_RS08780 and BWI76_RS08785 are separated by 701 nucleotides
BWI76_RS08770: BWI76_RS08770 - malonyl-ACP O-methyltransferase BioC, at 1,848,591 to 1,849,346
_RS08770
BWI76_RS08775: BWI76_RS08775 - dethiobiotin synthase, at 1,849,339 to 1,850,061
_RS08775
BWI76_RS08780: BWI76_RS08780 - ABC transporter, at 1,850,003 to 1,850,725
_RS08780
BWI76_RS08785: BWI76_RS08785 - excinuclease ABC subunit B, at 1,851,427 to 1,853,442
_RS08785
Position (kb) 1850
1851 Strain fitness (log2 ratio) -1
0
1 at 1849.437 kb on - strand, within BWI76_RS08775 at 1849.551 kb on + strand, within BWI76_RS08775 at 1849.559 kb on - strand, within BWI76_RS08775 at 1849.794 kb on + strand, within BWI76_RS08775 at 1849.817 kb on - strand, within BWI76_RS08775 at 1850.085 kb on + strand, within BWI76_RS08780 at 1850.272 kb on - strand, within BWI76_RS08780 at 1850.583 kb on + strand, within BWI76_RS08780 at 1850.997 kb on - strand at 1851.425 kb on - strand at 1851.517 kb on + strand at 1851.642 kb on + strand, within BWI76_RS08785
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 0.5 mg/ml remove 1,849,437 - BWI76_RS08775 0.14 -0.0 1,849,551 + BWI76_RS08775 0.29 -0.5 1,849,559 - BWI76_RS08775 0.30 -0.7 1,849,794 + BWI76_RS08775 0.63 +0.1 1,849,817 - BWI76_RS08775 0.66 -0.0 1,850,085 + BWI76_RS08780 0.11 +0.1 1,850,272 - BWI76_RS08780 0.37 +0.4 1,850,583 + BWI76_RS08780 0.80 +0.9 1,850,997 - +0.0 1,851,425 - -0.1 1,851,517 + -0.2 1,851,642 + BWI76_RS08785 0.11 -0.2
Or see this region's nucleotide sequence