Experiment: Fusidic 0.5 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS03900 and BWI76_RS03905 overlap by 4 nucleotides BWI76_RS03905 and BWI76_RS03910 overlap by 14 nucleotides BWI76_RS03910 and BWI76_RS03915 overlap by 4 nucleotides
BWI76_RS03900: BWI76_RS03900 - Na+/proline symporter, at 806,232 to 807,719
_RS03900
BWI76_RS03905: BWI76_RS03905 - 2-oxo-3-deoxygalactonate kinase, at 807,716 to 808,588
_RS03905
BWI76_RS03910: BWI76_RS03910 - 2-dehydro-3-deoxy-6-phosphogalactonate aldolase, at 808,575 to 809,177
_RS03910
BWI76_RS03915: BWI76_RS03915 - MurR/RpiR family transcriptional regulator, at 809,174 to 810,037
_RS03915
Position (kb) 807
808
809 Strain fitness (log2 ratio) -1
0
1
2
3 at 806.717 kb on - strand, within BWI76_RS03900 at 806.717 kb on - strand, within BWI76_RS03900 at 806.717 kb on - strand, within BWI76_RS03900 at 806.741 kb on + strand, within BWI76_RS03900 at 806.749 kb on + strand, within BWI76_RS03900 at 806.751 kb on + strand at 806.754 kb on - strand, within BWI76_RS03900 at 806.756 kb on + strand, within BWI76_RS03900 at 806.756 kb on + strand, within BWI76_RS03900 at 806.756 kb on + strand, within BWI76_RS03900 at 806.756 kb on + strand, within BWI76_RS03900 at 806.756 kb on + strand, within BWI76_RS03900 at 806.756 kb on + strand, within BWI76_RS03900 at 806.756 kb on + strand, within BWI76_RS03900 at 806.764 kb on - strand, within BWI76_RS03900 at 806.764 kb on - strand, within BWI76_RS03900 at 806.764 kb on - strand at 806.764 kb on - strand, within BWI76_RS03900 at 806.764 kb on - strand, within BWI76_RS03900 at 806.764 kb on - strand, within BWI76_RS03900 at 806.767 kb on + strand, within BWI76_RS03900 at 806.770 kb on + strand, within BWI76_RS03900 at 806.772 kb on + strand, within BWI76_RS03900 at 806.779 kb on - strand, within BWI76_RS03900 at 806.785 kb on - strand, within BWI76_RS03900 at 806.818 kb on + strand, within BWI76_RS03900 at 806.824 kb on + strand, within BWI76_RS03900 at 806.831 kb on + strand, within BWI76_RS03900 at 806.831 kb on + strand, within BWI76_RS03900 at 806.831 kb on + strand, within BWI76_RS03900 at 806.833 kb on - strand, within BWI76_RS03900 at 806.834 kb on - strand, within BWI76_RS03900 at 806.835 kb on + strand, within BWI76_RS03900 at 806.839 kb on + strand, within BWI76_RS03900 at 806.843 kb on + strand, within BWI76_RS03900 at 806.848 kb on + strand, within BWI76_RS03900 at 806.848 kb on + strand, within BWI76_RS03900 at 806.848 kb on + strand, within BWI76_RS03900 at 806.848 kb on - strand, within BWI76_RS03900 at 806.899 kb on + strand, within BWI76_RS03900 at 806.899 kb on + strand, within BWI76_RS03900 at 806.907 kb on - strand, within BWI76_RS03900 at 807.006 kb on - strand, within BWI76_RS03900 at 807.216 kb on - strand, within BWI76_RS03900 at 807.234 kb on + strand, within BWI76_RS03900 at 807.249 kb on + strand, within BWI76_RS03900 at 807.257 kb on - strand, within BWI76_RS03900 at 807.336 kb on + strand, within BWI76_RS03900 at 807.396 kb on + strand, within BWI76_RS03900 at 807.398 kb on + strand, within BWI76_RS03900 at 807.403 kb on + strand, within BWI76_RS03900 at 807.436 kb on + strand, within BWI76_RS03900 at 807.499 kb on + strand, within BWI76_RS03900 at 807.512 kb on + strand, within BWI76_RS03900 at 807.512 kb on + strand, within BWI76_RS03900 at 807.520 kb on - strand, within BWI76_RS03900 at 807.520 kb on - strand, within BWI76_RS03900 at 807.698 kb on + strand at 807.706 kb on - strand at 807.747 kb on + strand at 807.755 kb on - strand at 807.859 kb on + strand, within BWI76_RS03905 at 807.951 kb on - strand, within BWI76_RS03905 at 807.983 kb on - strand, within BWI76_RS03905 at 808.000 kb on + strand, within BWI76_RS03905 at 808.008 kb on - strand, within BWI76_RS03905 at 808.114 kb on + strand, within BWI76_RS03905 at 808.122 kb on - strand at 808.146 kb on - strand, within BWI76_RS03905 at 808.314 kb on - strand, within BWI76_RS03905 at 808.451 kb on - strand, within BWI76_RS03905 at 808.503 kb on - strand at 808.582 kb on + strand at 808.774 kb on - strand, within BWI76_RS03910 at 808.779 kb on - strand, within BWI76_RS03910 at 809.235 kb on - strand at 809.333 kb on - strand at 809.380 kb on - strand, within BWI76_RS03915 at 809.384 kb on - strand, within BWI76_RS03915 at 809.484 kb on + strand, within BWI76_RS03915
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 0.5 mg/ml remove 806,717 - BWI76_RS03900 0.33 +0.0 806,717 - BWI76_RS03900 0.33 +0.3 806,717 - BWI76_RS03900 0.33 -0.6 806,741 + BWI76_RS03900 0.34 +0.4 806,749 + BWI76_RS03900 0.35 +1.0 806,751 + -0.3 806,754 - BWI76_RS03900 0.35 +0.6 806,756 + BWI76_RS03900 0.35 -0.1 806,756 + BWI76_RS03900 0.35 +0.1 806,756 + BWI76_RS03900 0.35 +0.6 806,756 + BWI76_RS03900 0.35 +0.5 806,756 + BWI76_RS03900 0.35 -0.9 806,756 + BWI76_RS03900 0.35 +0.3 806,756 + BWI76_RS03900 0.35 +0.7 806,764 - BWI76_RS03900 0.36 -0.3 806,764 - BWI76_RS03900 0.36 -0.3 806,764 - -1.1 806,764 - BWI76_RS03900 0.36 +3.1 806,764 - BWI76_RS03900 0.36 +0.0 806,764 - BWI76_RS03900 0.36 +0.2 806,767 + BWI76_RS03900 0.36 +0.1 806,770 + BWI76_RS03900 0.36 -0.3 806,772 + BWI76_RS03900 0.36 +0.3 806,779 - BWI76_RS03900 0.37 +0.0 806,785 - BWI76_RS03900 0.37 -0.5 806,818 + BWI76_RS03900 0.39 +0.8 806,824 + BWI76_RS03900 0.40 -0.2 806,831 + BWI76_RS03900 0.40 +0.2 806,831 + BWI76_RS03900 0.40 +0.4 806,831 + BWI76_RS03900 0.40 +0.7 806,833 - BWI76_RS03900 0.40 +1.1 806,834 - BWI76_RS03900 0.40 +0.5 806,835 + BWI76_RS03900 0.41 -0.9 806,839 + BWI76_RS03900 0.41 +0.2 806,843 + BWI76_RS03900 0.41 -0.4 806,848 + BWI76_RS03900 0.41 +0.2 806,848 + BWI76_RS03900 0.41 +0.2 806,848 + BWI76_RS03900 0.41 +0.2 806,848 - BWI76_RS03900 0.41 +0.1 806,899 + BWI76_RS03900 0.45 +0.8 806,899 + BWI76_RS03900 0.45 +0.5 806,907 - BWI76_RS03900 0.45 -0.2 807,006 - BWI76_RS03900 0.52 +0.3 807,216 - BWI76_RS03900 0.66 +3.4 807,234 + BWI76_RS03900 0.67 -0.1 807,249 + BWI76_RS03900 0.68 -0.5 807,257 - BWI76_RS03900 0.69 +0.0 807,336 + BWI76_RS03900 0.74 +0.6 807,396 + BWI76_RS03900 0.78 -0.3 807,398 + BWI76_RS03900 0.78 +0.4 807,403 + BWI76_RS03900 0.79 -1.1 807,436 + BWI76_RS03900 0.81 +0.0 807,499 + BWI76_RS03900 0.85 +0.1 807,512 + BWI76_RS03900 0.86 +1.3 807,512 + BWI76_RS03900 0.86 +0.3 807,520 - BWI76_RS03900 0.87 -0.3 807,520 - BWI76_RS03900 0.87 -0.5 807,698 + +0.8 807,706 - -0.4 807,747 + -0.1 807,755 - -0.9 807,859 + BWI76_RS03905 0.16 +0.1 807,951 - BWI76_RS03905 0.27 +0.2 807,983 - BWI76_RS03905 0.31 -0.0 808,000 + BWI76_RS03905 0.33 -0.2 808,008 - BWI76_RS03905 0.33 +0.4 808,114 + BWI76_RS03905 0.46 +1.2 808,122 - +2.1 808,146 - BWI76_RS03905 0.49 +1.0 808,314 - BWI76_RS03905 0.68 +0.3 808,451 - BWI76_RS03905 0.84 +0.4 808,503 - -0.1 808,582 + -0.3 808,774 - BWI76_RS03910 0.33 -0.2 808,779 - BWI76_RS03910 0.34 -0.3 809,235 - +0.2 809,333 - +2.1 809,380 - BWI76_RS03915 0.24 +0.1 809,384 - BWI76_RS03915 0.24 -0.5 809,484 + BWI76_RS03915 0.36 -0.1
Or see this region's nucleotide sequence