Experiment: casaminos (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0435 and DvMF_0436 are separated by 241 nucleotides DvMF_0436 and DvMF_0437 are separated by 260 nucleotides DvMF_0437 and DvMF_0438 are separated by 112 nucleotides DvMF_0438 and DvMF_0439 are separated by 0 nucleotides
DvMF_0435: DvMF_0435 - hypothetical protein (RefSeq), at 510,355 to 510,753
_0435
DvMF_0436: DvMF_0436 - hypothetical protein (RefSeq), at 510,995 to 511,432
_0436
DvMF_0437: DvMF_0437 - magnesium-translocating P-type ATPase (RefSeq), at 511,693 to 514,335
_0437
DvMF_0438: DvMF_0438 - hypothetical protein (RefSeq), at 514,448 to 514,726
_0438
DvMF_0439: DvMF_0439 - phosphoglyceromutase (RefSeq), at 514,727 to 516,400
_0439
Position (kb) 511
512
513
514
515 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 510.820 kb on - strand at 511.159 kb on - strand, within DvMF_0436 at 511.274 kb on + strand, within DvMF_0436 at 511.412 kb on - strand at 511.765 kb on - strand at 511.810 kb on + strand at 511.834 kb on + strand at 511.891 kb on - strand at 511.908 kb on + strand at 511.911 kb on - strand at 512.266 kb on + strand, within DvMF_0437 at 512.341 kb on - strand, within DvMF_0437 at 512.442 kb on + strand, within DvMF_0437 at 512.466 kb on - strand, within DvMF_0437 at 512.606 kb on - strand, within DvMF_0437 at 512.721 kb on - strand, within DvMF_0437 at 513.060 kb on - strand, within DvMF_0437 at 513.250 kb on - strand, within DvMF_0437 at 513.489 kb on + strand, within DvMF_0437 at 513.543 kb on + strand, within DvMF_0437 at 513.630 kb on - strand, within DvMF_0437 at 513.705 kb on + strand, within DvMF_0437 at 513.799 kb on - strand, within DvMF_0437 at 513.854 kb on - strand, within DvMF_0437 at 513.937 kb on + strand, within DvMF_0437 at 513.968 kb on + strand, within DvMF_0437 at 513.971 kb on - strand, within DvMF_0437 at 514.042 kb on - strand, within DvMF_0437 at 514.253 kb on - strand at 514.647 kb on - strand, within DvMF_0438
Per-strain Table
Position Strand Gene LocusTag Fraction casaminos (N) remove 510,820 - -0.3 511,159 - DvMF_0436 0.37 -3.1 511,274 + DvMF_0436 0.64 -0.1 511,412 - -0.2 511,765 - -0.3 511,810 + -2.2 511,834 + -0.4 511,891 - -1.1 511,908 + -0.5 511,911 - -0.3 512,266 + DvMF_0437 0.22 -0.4 512,341 - DvMF_0437 0.25 -0.3 512,442 + DvMF_0437 0.28 -0.4 512,466 - DvMF_0437 0.29 -0.1 512,606 - DvMF_0437 0.35 -0.2 512,721 - DvMF_0437 0.39 -0.5 513,060 - DvMF_0437 0.52 -0.5 513,250 - DvMF_0437 0.59 -0.3 513,489 + DvMF_0437 0.68 -0.0 513,543 + DvMF_0437 0.70 -0.1 513,630 - DvMF_0437 0.73 -0.4 513,705 + DvMF_0437 0.76 +0.2 513,799 - DvMF_0437 0.80 -0.2 513,854 - DvMF_0437 0.82 -0.4 513,937 + DvMF_0437 0.85 -0.5 513,968 + DvMF_0437 0.86 -0.1 513,971 - DvMF_0437 0.86 -0.4 514,042 - DvMF_0437 0.89 -1.0 514,253 - -0.5 514,647 - DvMF_0438 0.71 -0.8
Or see this region's nucleotide sequence