Strain Fitness in Pantoea sp. MT58 around IAI47_07160

Experiment: Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=2hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=2hrs; Outgrowth=LBkan50
1,509,624	+				+0.9
1,509,652	+				+0.2
1,509,652	+				+0.4
1,509,653	-				-0.8
1,509,653	-				-0.3
1,509,682	+				+0.7
1,509,776	+		IAI47_07155	0.14	-1.7
1,509,776	+		IAI47_07155	0.14	+0.9
1,509,776	+		IAI47_07155	0.14	-1.3
1,509,776	+		IAI47_07155	0.14	-0.7
1,509,777	-		IAI47_07155	0.14	+0.1
1,509,777	-		IAI47_07155	0.14	+1.4
1,509,777	-		IAI47_07155	0.14	-0.3
1,509,777	-		IAI47_07155	0.14	+0.3
1,509,777	-		IAI47_07155	0.14	-0.5
1,509,798	+		IAI47_07155	0.17	-1.0
1,509,798	+		IAI47_07155	0.17	+0.2
1,509,798	+		IAI47_07155	0.17	-1.9
1,509,798	+		IAI47_07155	0.17	-0.7
1,509,799	-		IAI47_07155	0.17	+0.1
1,509,817	+		IAI47_07155	0.19	+1.2
1,509,817	+		IAI47_07155	0.19	-1.3
1,509,818	-		IAI47_07155	0.19	-1.0
1,509,818	-		IAI47_07155	0.19	+0.3
1,509,818	-		IAI47_07155	0.19	+0.0
1,509,913	+		IAI47_07155	0.32	-0.4
1,509,913	+		IAI47_07155	0.32	+1.0
1,509,973	+		IAI47_07155	0.39	+1.0
1,509,973	+		IAI47_07155	0.39	-1.4
1,509,973	+		IAI47_07155	0.39	+0.1
1,509,973	+		IAI47_07155	0.39	-0.5
1,509,973	+		IAI47_07155	0.39	+0.8
1,509,973	+		IAI47_07155	0.39	+0.6
1,509,973	+		IAI47_07155	0.39	+0.5
1,509,974	-		IAI47_07155	0.39	+0.4
1,509,974	-		IAI47_07155	0.39	-1.1
1,509,974	-		IAI47_07155	0.39	-0.3
1,509,974	-		IAI47_07155	0.39	-0.7
1,509,974	-		IAI47_07155	0.39	-3.4
1,509,974	-		IAI47_07155	0.39	+0.6
1,509,974	-		IAI47_07155	0.39	-0.7
1,509,974	-		IAI47_07155	0.39	-0.8
1,509,974	-		IAI47_07155	0.39	+0.5
1,510,016	+		IAI47_07155	0.45	-1.6
1,510,017	-		IAI47_07155	0.45	-0.1
1,510,017	-		IAI47_07155	0.45	-1.2
1,510,039	+		IAI47_07155	0.48	-0.5
1,510,039	+		IAI47_07155	0.48	-0.2
1,510,040	-		IAI47_07155	0.48	+0.6
1,510,040	-		IAI47_07155	0.48	+0.0
1,510,040	-		IAI47_07155	0.48	-0.1
1,510,040	-		IAI47_07155	0.48	-0.3
1,510,040	-		IAI47_07155	0.48	+1.1
1,510,040	-		IAI47_07155	0.48	-0.5
1,510,040	-		IAI47_07155	0.48	-1.7
1,510,040	-		IAI47_07155	0.48	-1.1
1,510,040	-		IAI47_07155	0.48	+0.5
1,510,089	+		IAI47_07155	0.54	+0.1
1,510,089	+		IAI47_07155	0.54	+1.0
1,510,090	-		IAI47_07155	0.54	+0.7
1,510,090	-		IAI47_07155	0.54	-0.9
1,510,090	-		IAI47_07155	0.54	+1.3
1,510,111	+		IAI47_07155	0.57	-1.3
1,510,111	+		IAI47_07155	0.57	-1.1
1,510,112	-		IAI47_07155	0.57	-2.3
1,510,112	-		IAI47_07155	0.57	-0.1
1,510,121	+		IAI47_07155	0.58	+0.0
1,510,121	+		IAI47_07155	0.58	-0.0
1,510,121	+		IAI47_07155	0.58	+0.9
1,510,121	+		IAI47_07155	0.58	-0.2
1,510,121	+		IAI47_07155	0.58	-0.5
1,510,121	+		IAI47_07155	0.58	+1.0
1,510,121	+		IAI47_07155	0.58	-0.1
1,510,121	+		IAI47_07155	0.58	+1.9
1,510,121	+		IAI47_07155	0.58	+0.7
1,510,122	-		IAI47_07155	0.58	-2.1
1,510,122	-		IAI47_07155	0.58	+0.8
1,510,122	-		IAI47_07155	0.58	-0.8
1,510,122	-		IAI47_07155	0.58	+0.7
1,510,122	-		IAI47_07155	0.58	-1.0
1,510,140	-		IAI47_07155	0.60	-1.1
1,510,187	-		IAI47_07155	0.66	-1.0
1,510,187	-		IAI47_07155	0.66	+0.9
1,510,187	-		IAI47_07155	0.66	-1.9
1,510,250	+		IAI47_07155	0.74	+1.3
1,510,251	-		IAI47_07155	0.75	+0.3
1,510,251	-		IAI47_07155	0.75	-0.6
1,510,262	+		IAI47_07155	0.76	+1.1
1,510,263	-		IAI47_07155	0.76	+0.2
1,510,272	+		IAI47_07155	0.77	-0.9
1,510,273	-		IAI47_07155	0.77	-0.5
1,510,273	-		IAI47_07155	0.77	+0.7
1,510,321	+		IAI47_07155	0.83	-1.1
1,510,322	-		IAI47_07155	0.84	-1.3
1,510,326	-		IAI47_07155	0.84	+2.2
1,510,326	-		IAI47_07155	0.84	+0.1
1,510,326	-		IAI47_07155	0.84	+1.0
1,510,331	+		IAI47_07155	0.85	+0.9
1,510,331	+		IAI47_07155	0.85	-0.7
1,510,332	-		IAI47_07155	0.85	-0.4
1,510,332	-		IAI47_07155	0.85	-0.0
1,510,361	+		IAI47_07155	0.89	+1.1
1,510,362	-		IAI47_07155	0.89	-0.2
1,510,362	-		IAI47_07155	0.89	-1.6
1,510,385	+				-0.9
1,510,385	+				-0.1
1,510,385	+				+1.3
1,510,385	+				-0.1
1,510,386	-				+0.7
1,510,386	-				-0.9
1,510,386	-				+2.2
1,510,440	+				+0.9
1,510,441	-				+0.6
1,510,453	+				+1.3
1,510,454	-				+0.5
1,510,525	-				+1.3
1,510,571	+				-0.0
1,510,572	-				-0.9
1,510,572	-				+1.5
1,510,572	-				+0.9
1,510,574	+				-0.6
1,510,575	-				-0.3
1,510,601	-				+0.1
1,510,601	-				+0.5
1,510,672	+				-0.7
1,510,672	+				-0.4
1,510,672	+				+0.4
1,510,673	-				-0.3
1,510,673	-				-1.2
1,510,766	+		IAI47_07160	0.14	+0.0
1,510,766	+		IAI47_07160	0.14	+1.2
1,510,766	+		IAI47_07160	0.14	-1.3
1,510,766	+		IAI47_07160	0.14	-1.0
1,510,767	-		IAI47_07160	0.14	-1.0
1,510,767	-		IAI47_07160	0.14	-0.3
1,510,767	-		IAI47_07160	0.14	+0.3
1,510,767	-		IAI47_07160	0.14	+0.3
1,510,808	+		IAI47_07160	0.17	+0.0
1,510,808	+		IAI47_07160	0.17	-1.5
1,510,854	-		IAI47_07160	0.21	-0.2
1,510,867	+		IAI47_07160	0.22	-0.0
1,510,868	-		IAI47_07160	0.22	+1.0
1,510,904	+		IAI47_07160	0.24	+0.6
1,510,905	-		IAI47_07160	0.24	+0.3
1,510,940	+		IAI47_07160	0.27	-1.7
1,510,940	+		IAI47_07160	0.27	+0.8
1,510,940	+		IAI47_07160	0.27	-0.3
1,510,941	-		IAI47_07160	0.27	-0.7
1,510,941	-		IAI47_07160	0.27	-0.3
1,510,941	-		IAI47_07160	0.27	-0.2
1,510,941	-		IAI47_07160	0.27	-1.6
1,510,943	+		IAI47_07160	0.27	-1.2
1,510,943	+		IAI47_07160	0.27	+0.7
1,510,943	+		IAI47_07160	0.27	+1.8
1,510,943	+		IAI47_07160	0.27	+1.0
1,510,943	+		IAI47_07160	0.27	-0.2
1,510,944	-		IAI47_07160	0.27	-0.1
1,510,944	-		IAI47_07160	0.27	-1.8
1,510,962	+		IAI47_07160	0.29	-0.5
1,510,963	-		IAI47_07160	0.29	+0.7
1,510,973	+		IAI47_07160	0.29	-0.7
1,510,973	+		IAI47_07160	0.29	+0.1
1,510,973	+		IAI47_07160	0.29	+0.7
1,511,096	+		IAI47_07160	0.38	-0.9
1,511,121	-		IAI47_07160	0.40	-0.7
1,511,155	-		IAI47_07160	0.43	-1.3
1,511,155	-		IAI47_07160	0.43	-1.2
1,511,155	-		IAI47_07160	0.43	-1.5
1,511,157	+		IAI47_07160	0.43	-0.8
1,511,157	+		IAI47_07160	0.43	-0.5
1,511,157	+		IAI47_07160	0.43	-0.0
1,511,158	-		IAI47_07160	0.43	-0.9
1,511,158	-		IAI47_07160	0.43	-2.3
1,511,158	-		IAI47_07160	0.43	-1.5
1,511,314	+		IAI47_07160	0.54	-0.6
1,511,314	+		IAI47_07160	0.54	+0.0
1,511,314	+		IAI47_07160	0.54	-0.3
1,511,314	+		IAI47_07160	0.54	+0.8
1,511,315	-		IAI47_07160	0.55	-0.1
1,511,419	+		IAI47_07160	0.62	-1.2
1,511,419	+		IAI47_07160	0.62	-0.1
1,511,419	+		IAI47_07160	0.62	+0.9
1,511,420	-		IAI47_07160	0.62	+1.6
1,511,549	+		IAI47_07160	0.72	+0.1
1,511,576	+		IAI47_07160	0.74	+1.1
1,511,576	+		IAI47_07160	0.74	-1.1
1,511,716	+		IAI47_07160	0.84	-1.3
1,511,732	+		IAI47_07160	0.85	-1.1
1,511,732	+		IAI47_07160	0.85	-0.6
1,511,733	-		IAI47_07160	0.85	-0.5
1,511,824	-				-0.9
1,511,834	-				-1.6
1,511,851	+				+1.2
1,511,851	+				+0.8
1,511,851	+				-0.4
1,511,851	+				-2.2
1,511,852	-				+0.2
1,511,852	-				-0.9
1,511,852	-				+3.3
1,511,878	+				+0.1
1,511,878	+				-1.8
1,511,878	+				+0.9
1,511,878	+				+0.0
1,511,923	+				+0.3
1,511,923	+				-0.6
1,511,924	-				-0.6
1,511,939	+				+0.2
1,511,939	+				-0.9
1,511,939	+				-0.9
1,511,939	+				-0.2
1,511,940	-				-0.1
1,511,940	-				+0.7
1,511,940	-				+0.9
1,511,940	-				+0.1
1,511,987	+				-0.2
1,511,988	-				+0.8
1,511,988	-				+0.4
1,512,020	-				-1.1
1,512,092	+				-0.5
1,512,278	+		IAI47_07165	0.20	+0.1
1,512,333	+		IAI47_07165	0.24	-1.1
1,512,512	+		IAI47_07165	0.36	-0.7
1,512,860	-		IAI47_07165	0.61	+3.3