Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c00780

Experiment: m.b. Polymyxin B sulfate 0.0032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Polymyxin B sulfate 0.0032 mg/ml
74,231	+		PGA1_c00760	0.69	-2.3
74,246	-		PGA1_c00760	0.71	-1.3
74,346	+		PGA1_c00760	0.84	-1.0
74,363	+		PGA1_c00760	0.86	-2.3
74,364	-		PGA1_c00760	0.86	-1.9
74,381	+		PGA1_c00760	0.88	+2.1
74,381	+		PGA1_c00760	0.88	+1.9
74,381	+		PGA1_c00760	0.88	+3.2
74,389	-		PGA1_c00760	0.89	+0.3
74,400	+				-2.4
74,424	+				-1.1
74,424	+				-0.4
74,432	-				+3.8
74,432	-				-1.2
74,437	+				-0.8
74,448	+				-1.0
74,473	-				+1.5
74,473	-				-1.4
74,504	-				-2.9
74,525	-				+1.5
74,525	-				+2.0
74,535	+				+2.2
74,536	-				-2.2
74,536	-				-0.9
74,536	-				+0.4
74,573	+				-1.7
74,586	-				-0.8
74,619	+				-2.6
74,619	+				-1.0
74,619	+				+1.1
74,622	+				-1.8
74,622	-				-0.6
74,627	-				-2.4
74,628	-				+1.8
74,628	-				-0.7
74,628	-				-2.4
74,629	+				+3.5
74,647	-				+2.4
74,660	-				+0.8
74,696	-		PGA1_c00770	0.20	-1.4
74,710	+		PGA1_c00770	0.24	+1.8
74,754	+		PGA1_c00770	0.37	+1.9
74,754	-		PGA1_c00770	0.37	-1.6
74,762	-		PGA1_c00770	0.40	-3.1
74,764	-		PGA1_c00770	0.40	-0.8
74,775	-		PGA1_c00770	0.43	+1.5
74,801	+		PGA1_c00770	0.51	-2.0
74,834	+		PGA1_c00770	0.61	-0.3
74,892	-		PGA1_c00770	0.78	-1.6
74,892	-		PGA1_c00770	0.78	-1.2
74,901	+		PGA1_c00770	0.81	+3.0
74,901	+		PGA1_c00770	0.81	+2.1
74,909	-		PGA1_c00770	0.83	-0.1
74,909	-		PGA1_c00770	0.83	-1.1
74,948	+				+2.3
75,001	-				-1.5
75,012	+				-1.2
75,200	+				-1.8
75,224	-				-2.9
75,307	-				-0.7
75,333	-				-0.4
75,404	-				+1.8
75,445	+		PGA1_c00780	0.10	-0.9
75,445	+		PGA1_c00780	0.10	-0.8
75,513	+		PGA1_c00780	0.12	-3.0
75,822	-		PGA1_c00780	0.21	+1.6
75,829	-		PGA1_c00780	0.21	-2.1
75,847	-		PGA1_c00780	0.22	+0.6
75,878	-		PGA1_c00780	0.23	-0.4
75,981	+		PGA1_c00780	0.26	+0.4
76,066	-		PGA1_c00780	0.28	-1.0
76,126	+		PGA1_c00780	0.30	+0.6
76,126	+		PGA1_c00780	0.30	-1.0
76,126	+		PGA1_c00780	0.30	+1.8
76,134	-		PGA1_c00780	0.30	-0.5
76,153	-		PGA1_c00780	0.31	-2.9
76,155	+		PGA1_c00780	0.31	-1.6
76,293	-		PGA1_c00780	0.35	+0.5
76,303	-		PGA1_c00780	0.35	-0.4
76,303	-		PGA1_c00780	0.35	+1.1
76,309	-		PGA1_c00780	0.35	-1.9
76,388	+		PGA1_c00780	0.38	+1.8
76,394	+		PGA1_c00780	0.38	+0.6
76,542	-		PGA1_c00780	0.42	-1.5
76,626	+		PGA1_c00780	0.44	+0.1
76,680	-		PGA1_c00780	0.46	-0.4
76,691	+		PGA1_c00780	0.46	-1.8
76,800	-		PGA1_c00780	0.49	-1.5
76,888	+		PGA1_c00780	0.52	+0.3
76,899	+		PGA1_c00780	0.52	-2.6
76,909	+		PGA1_c00780	0.53	-2.6
76,917	-		PGA1_c00780	0.53	+1.7
76,959	-		PGA1_c00780	0.54	+1.1
77,054	+		PGA1_c00780	0.57	-1.4
77,054	+		PGA1_c00780	0.57	-0.8
77,054	+		PGA1_c00780	0.57	-2.0
77,062	-		PGA1_c00780	0.57	-2.0
77,104	-		PGA1_c00780	0.58	-0.4
77,208	-		PGA1_c00780	0.61	-1.6
77,426	+		PGA1_c00780	0.68	-3.0
77,428	+		PGA1_c00780	0.68	-1.8
77,434	-		PGA1_c00780	0.68	-2.0
77,434	-		PGA1_c00780	0.68	-0.4
77,483	+		PGA1_c00780	0.69	-2.1
77,491	-		PGA1_c00780	0.69	-0.8
77,559	+		PGA1_c00780	0.71	-0.1
77,559	+		PGA1_c00780	0.71	-0.6
77,567	-		PGA1_c00780	0.72	+1.6
77,603	-		PGA1_c00780	0.73	-0.2
77,635	-		PGA1_c00780	0.74	-1.5
77,635	-		PGA1_c00780	0.74	-1.8
77,641	+		PGA1_c00780	0.74	-1.2
77,678	-		PGA1_c00780	0.75	-1.2
77,751	-		PGA1_c00780	0.77	+0.8
77,751	-		PGA1_c00780	0.77	+0.3
77,775	+		PGA1_c00780	0.78	-2.0
77,808	+		PGA1_c00780	0.79	-1.8
77,813	+		PGA1_c00780	0.79	-0.5
77,816	-		PGA1_c00780	0.79	-1.8
77,816	-		PGA1_c00780	0.79	-1.7
77,840	-		PGA1_c00780	0.80	-1.8
77,850	-		PGA1_c00780	0.80	-0.5
77,856	+		PGA1_c00780	0.80	-2.3
77,864	-		PGA1_c00780	0.80	-1.5
77,902	-		PGA1_c00780	0.81	+2.6
77,940	-		PGA1_c00780	0.82	-2.4
78,074	+		PGA1_c00780	0.86	+0.2
78,085	+		PGA1_c00780	0.87	+0.2
78,093	-		PGA1_c00780	0.87	-1.2
78,109	+		PGA1_c00780	0.87	-1.9
78,151	+		PGA1_c00780	0.89	-1.7
78,276	+				-3.3
78,284	-				-2.6
78,309	+				-0.8
78,506	-				-0.7
78,541	+				+0.1
78,568	+				-1.6
78,637	-				+3.3
78,642	-				-1.1
78,653	+		PGA1_c00790	0.10	-1.9
78,661	-		PGA1_c00790	0.12	+0.2
78,661	-		PGA1_c00790	0.12	+3.4
78,661	-		PGA1_c00790	0.12	-1.0
78,678	+		PGA1_c00790	0.16	-0.6
78,740	+		PGA1_c00790	0.29	-1.3
78,772	+		PGA1_c00790	0.36	+3.2
78,803	+		PGA1_c00790	0.43	+1.8
78,804	+		PGA1_c00790	0.43	+1.8
78,811	-		PGA1_c00790	0.44	+1.0
78,859	-		PGA1_c00790	0.54	+1.3
78,935	-		PGA1_c00790	0.71	+2.0
79,037	-				+2.8
79,065	+				-1.4
79,075	+				-1.6
79,075	+				-0.8
79,075	+				-0.9
79,083	-				-1.4
79,083	-				-0.3
79,133	+				-2.6
79,186	+		PGA1_c00800	0.13	+2.8
79,209	+		PGA1_c00800	0.19	+1.3
79,227	-		PGA1_c00800	0.24	-0.4
79,244	-		PGA1_c00800	0.28	-0.9
79,308	+		PGA1_c00800	0.44	-1.0
79,366	+		PGA1_c00800	0.59	-1.0
79,374	-		PGA1_c00800	0.61	+0.3
79,374	-		PGA1_c00800	0.61	-0.8
79,382	-		PGA1_c00800	0.63	-2.8
79,428	+		PGA1_c00800	0.75	+1.5
79,458	+		PGA1_c00800	0.83	-2.2
79,518	+				-2.2
79,526	-				+1.1
79,539	+				-1.9