Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c07520
Experiment: m.b. Polymyxin B sulfate 0.0032 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Polymyxin B sulfate 0.0032 mg/ml |
---|---|---|---|---|---|
remove | |||||
776,862 | - | PGA1_c07510 | 0.68 | +3.7 | |
776,896 | + | PGA1_c07510 | 0.70 | -0.3 | |
777,007 | + | PGA1_c07510 | 0.73 | +3.1 | |
777,007 | + | PGA1_c07510 | 0.73 | +1.5 | |
777,153 | - | PGA1_c07510 | 0.78 | -1.0 | |
777,267 | + | PGA1_c07510 | 0.82 | +0.7 | |
777,270 | - | PGA1_c07510 | 0.82 | +2.0 | |
777,304 | + | PGA1_c07510 | 0.83 | +2.7 | |
777,310 | - | PGA1_c07510 | 0.83 | +1.2 | |
777,521 | - | -1.2 | |||
777,528 | - | +3.6 | |||
777,544 | - | +2.9 | |||
777,608 | - | +0.2 | |||
777,714 | - | +3.0 | |||
777,717 | - | +3.0 | |||
777,720 | + | -2.0 | |||
777,720 | + | +4.3 | |||
777,768 | - | +1.6 | |||
777,792 | - | +2.7 | |||
777,796 | - | +2.5 | |||
777,900 | + | PGA1_c07520 | 0.15 | -0.1 | |
777,900 | + | PGA1_c07520 | 0.15 | -2.7 | |
777,900 | - | PGA1_c07520 | 0.15 | +3.0 | |
777,922 | + | PGA1_c07520 | 0.21 | -1.7 | |
777,930 | - | PGA1_c07520 | 0.23 | -2.5 | |
778,057 | + | PGA1_c07520 | 0.58 | +0.3 | |
778,060 | - | PGA1_c07520 | 0.59 | +2.9 | |
778,150 | - | PGA1_c07520 | 0.83 | +2.7 | |
778,184 | - | -1.4 | |||
778,633 | - | +2.3 | |||
778,650 | - | +1.0 | |||
778,738 | + | -2.4 |
Or see this region's nucleotide sequence