Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c35410

Experiment: m.b. Polymyxin B sulfate 0.0032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Polymyxin B sulfate 0.0032 mg/ml
3,712,943	+				-1.5
3,712,954	+				+2.6
3,712,954	+				-2.1
3,712,962	-				-1.4
3,712,962	-				-2.4
3,712,962	-				+1.7
3,712,962	-				-1.9
3,712,965	+				+0.4
3,712,965	+				+1.6
3,712,968	-				-3.0
3,712,973	-				+2.9
3,712,973	-				-1.2
3,712,973	-				+2.4
3,712,973	-				+3.0
3,712,973	-				+0.6
3,712,995	+				+0.9
3,712,995	+				+3.7
3,712,995	+				+4.6
3,712,995	+				+2.7
3,712,995	+				+1.4
3,712,995	+				+2.3
3,713,003	-				+1.2
3,713,003	-				+1.6
3,713,013	-				-2.0
3,713,013	-				+3.6
3,713,039	-				-0.7
3,713,039	-				-2.7
3,713,060	+		PGA1_c35400	0.11	+1.1
3,713,090	+		PGA1_c35400	0.16	-0.6
3,713,154	+		PGA1_c35400	0.26	+1.5
3,713,161	+		PGA1_c35400	0.27	-0.8
3,713,162	-		PGA1_c35400	0.28	+1.3
3,713,162	-		PGA1_c35400	0.28	-0.8
3,713,184	+		PGA1_c35400	0.31	-0.8
3,713,192	-		PGA1_c35400	0.33	+0.3
3,713,213	-		PGA1_c35400	0.36	+0.1
3,713,213	-		PGA1_c35400	0.36	-1.1
3,713,213	-		PGA1_c35400	0.36	-0.7
3,713,213	-		PGA1_c35400	0.36	-1.4
3,713,215	+		PGA1_c35400	0.37	+1.4
3,713,215	+		PGA1_c35400	0.37	-1.5
3,713,217	+		PGA1_c35400	0.37	+1.9
3,713,217	+		PGA1_c35400	0.37	-0.4
3,713,217	+		PGA1_c35400	0.37	-0.4
3,713,218	-		PGA1_c35400	0.37	-1.9
3,713,227	+		PGA1_c35400	0.39	+0.6
3,713,227	+		PGA1_c35400	0.39	+1.4
3,713,227	+		PGA1_c35400	0.39	-3.2
3,713,235	-		PGA1_c35400	0.40	-2.0
3,713,236	-		PGA1_c35400	0.40	-1.2
3,713,263	+		PGA1_c35400	0.45	-0.3
3,713,274	+		PGA1_c35400	0.46	+2.2
3,713,278	+		PGA1_c35400	0.47	-0.2
3,713,340	+		PGA1_c35400	0.57	-1.9
3,713,348	-		PGA1_c35400	0.59	+1.3
3,713,348	-		PGA1_c35400	0.59	+0.7
3,713,382	+		PGA1_c35400	0.64	+2.2
3,713,390	-		PGA1_c35400	0.66	+2.3
3,713,461	-		PGA1_c35400	0.78	+0.0
3,713,480	+		PGA1_c35400	0.81	-1.5
3,713,480	+		PGA1_c35400	0.81	-0.4
3,713,536	+				-0.2
3,713,580	+				-2.1
3,713,588	-				+1.7
3,713,633	+				-1.6
3,713,641	-				-0.7
3,713,657	+				-1.4
3,713,676	+				-2.3
3,713,676	+				+2.1
3,713,676	+				-1.2
3,713,676	+				+2.3
3,713,676	+				+0.8
3,713,684	-				+2.7
3,713,684	-				-1.3
3,713,721	-				-1.2
3,713,722	+				-0.9
3,713,732	+				-1.8
3,713,744	+				-1.1
3,713,816	+				-1.2
3,714,002	-		PGA1_c35410	0.43	+3.3
3,714,079	-		PGA1_c35410	0.68	+2.0
3,714,107	+		PGA1_c35410	0.77	+4.7
3,714,107	+		PGA1_c35410	0.77	+2.1
3,714,107	+		PGA1_c35410	0.77	+2.3
3,714,107	+		PGA1_c35410	0.77	-0.8
3,714,115	-		PGA1_c35410	0.79	-2.1
3,714,115	-		PGA1_c35410	0.79	+3.0
3,714,115	-		PGA1_c35410	0.79	+1.7
3,714,160	-				+0.9
3,714,168	-				+0.7
3,714,182	-				+3.8
3,714,205	+				-2.1
3,714,488	+		PGA1_c35420	0.12	-1.5
3,714,535	+		PGA1_c35420	0.15	+3.9
3,714,535	+		PGA1_c35420	0.15	-1.1
3,714,535	+		PGA1_c35420	0.15	+0.3
3,714,543	-		PGA1_c35420	0.16	+0.3
3,714,543	-		PGA1_c35420	0.16	-1.9
3,714,549	-		PGA1_c35420	0.16	-1.7
3,714,694	-		PGA1_c35420	0.27	-2.1
3,714,723	+		PGA1_c35420	0.29	+1.8
3,714,730	+		PGA1_c35420	0.29	-0.1
3,714,757	+		PGA1_c35420	0.31	+0.3
3,714,766	+		PGA1_c35420	0.32	-1.7
3,714,785	+		PGA1_c35420	0.33	-1.5
3,714,793	-		PGA1_c35420	0.34	-0.5
3,714,840	+		PGA1_c35420	0.37	+1.8
3,714,848	+		PGA1_c35420	0.38	+0.0
3,714,856	-		PGA1_c35420	0.38	+0.6
3,714,896	+		PGA1_c35420	0.41	+1.5
3,714,896	+		PGA1_c35420	0.41	+0.7
3,714,896	+		PGA1_c35420	0.41	-1.1
3,714,903	+		PGA1_c35420	0.42	-2.1
3,714,904	-		PGA1_c35420	0.42	-1.7
3,715,132	-		PGA1_c35420	0.58	+0.7
3,715,137	+		PGA1_c35420	0.58	+1.5
3,715,145	-		PGA1_c35420	0.59	+1.1
3,715,145	-		PGA1_c35420	0.59	+1.2
3,715,145	-		PGA1_c35420	0.59	-1.5
3,715,169	-		PGA1_c35420	0.61	-2.3