Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c32220

Experiment: m.b. Polymyxin B sulfate 0.0032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Polymyxin B sulfate 0.0032 mg/ml
3,377,538	-				-2.7
3,377,589	+				+0.5
3,377,617	+		PGA1_c32210	0.11	+1.6
3,377,621	+		PGA1_c32210	0.11	-0.7
3,377,654	+		PGA1_c32210	0.15	+3.5
3,377,654	+		PGA1_c32210	0.15	+3.3
3,377,654	+		PGA1_c32210	0.15	-0.9
3,377,662	-		PGA1_c32210	0.16	-0.1
3,377,662	-		PGA1_c32210	0.16	+1.4
3,377,662	-		PGA1_c32210	0.16	+2.3
3,377,662	-		PGA1_c32210	0.16	+1.6
3,377,676	+		PGA1_c32210	0.17	+2.4
3,377,833	+		PGA1_c32210	0.33	+3.3
3,377,842	-		PGA1_c32210	0.34	+2.3
3,377,859	+		PGA1_c32210	0.36	-1.6
3,377,879	+		PGA1_c32210	0.38	+2.4
3,377,883	+		PGA1_c32210	0.38	+2.4
3,377,954	-		PGA1_c32210	0.45	+3.0
3,378,052	+		PGA1_c32210	0.55	-3.0
3,378,092	+		PGA1_c32210	0.59	+1.2
3,378,092	+		PGA1_c32210	0.59	+1.4
3,378,092	+		PGA1_c32210	0.59	+1.4
3,378,100	-		PGA1_c32210	0.60	+1.3
3,378,100	-		PGA1_c32210	0.60	-1.1
3,378,148	-		PGA1_c32210	0.65	-2.7
3,378,170	-		PGA1_c32210	0.67	-1.3
3,378,170	-		PGA1_c32210	0.67	+1.2
3,378,170	-		PGA1_c32210	0.67	-1.0
3,378,174	+		PGA1_c32210	0.68	+1.5
3,378,182	-		PGA1_c32210	0.68	-0.6
3,378,228	+		PGA1_c32210	0.73	+2.4
3,378,228	+		PGA1_c32210	0.73	-1.3
3,378,228	+		PGA1_c32210	0.73	+1.0
3,378,236	-		PGA1_c32210	0.74	+2.8
3,378,236	-		PGA1_c32210	0.74	-1.2
3,378,258	-		PGA1_c32210	0.76	+2.0
3,378,260	-		PGA1_c32210	0.76	-2.1
3,378,264	+		PGA1_c32210	0.77	+3.5
3,378,272	-		PGA1_c32210	0.78	+3.0
3,378,274	-		PGA1_c32210	0.78	+1.3
3,378,274	-		PGA1_c32210	0.78	-1.1
3,378,274	-		PGA1_c32210	0.78	+2.8
3,378,274	-		PGA1_c32210	0.78	-0.2
3,378,307	-		PGA1_c32210	0.81	-0.4
3,378,317	-		PGA1_c32210	0.82	+4.2
3,378,323	+		PGA1_c32210	0.83	-1.4
3,378,369	-		PGA1_c32210	0.88	+2.2
3,378,416	+				+0.6
3,378,458	+				+1.1
3,378,496	-				+2.3
3,378,498	+				-1.8
3,378,506	-				-0.2
3,378,571	+				+4.4
3,378,603	+				-1.2
3,378,611	-				-1.7
3,378,659	+		PGA1_c32220	0.11	+0.5
3,378,670	+		PGA1_c32220	0.12	+2.8
3,378,678	-		PGA1_c32220	0.12	+1.4
3,378,735	-		PGA1_c32220	0.16	-1.2
3,378,758	+		PGA1_c32220	0.18	+1.8
3,378,758	+		PGA1_c32220	0.18	-0.9
3,378,807	-		PGA1_c32220	0.21	-0.6
3,378,849	+		PGA1_c32220	0.24	+0.9
3,378,849	+		PGA1_c32220	0.24	+3.4
3,378,849	+		PGA1_c32220	0.24	+1.8
3,378,849	+		PGA1_c32220	0.24	-1.8
3,378,849	+		PGA1_c32220	0.24	-2.5
3,378,849	+		PGA1_c32220	0.24	-1.4
3,378,849	+		PGA1_c32220	0.24	-0.3
3,378,857	-		PGA1_c32220	0.24	+3.4
3,378,857	-		PGA1_c32220	0.24	+0.9
3,378,857	-		PGA1_c32220	0.24	+1.3
3,378,857	-		PGA1_c32220	0.24	-3.4
3,378,857	-		PGA1_c32220	0.24	+3.3
3,378,857	-		PGA1_c32220	0.24	+0.9
3,378,859	+		PGA1_c32220	0.24	+3.3
3,378,859	+		PGA1_c32220	0.24	-3.0
3,378,859	+		PGA1_c32220	0.24	+1.6
3,378,859	+		PGA1_c32220	0.24	+2.9
3,378,859	+		PGA1_c32220	0.24	-2.3
3,378,859	+		PGA1_c32220	0.24	-2.2
3,378,859	+		PGA1_c32220	0.24	-1.4
3,378,859	+		PGA1_c32220	0.24	+1.9
3,378,859	+		PGA1_c32220	0.24	+1.9
3,378,867	-		PGA1_c32220	0.25	+1.8
3,378,867	-		PGA1_c32220	0.25	-2.1
3,378,867	-		PGA1_c32220	0.25	+2.8
3,378,867	-		PGA1_c32220	0.25	+2.8
3,378,867	-		PGA1_c32220	0.25	-1.6
3,378,867	-		PGA1_c32220	0.25	-1.0
3,378,887	+		PGA1_c32220	0.26	+1.8
3,378,895	-		PGA1_c32220	0.27	+3.5
3,378,914	+		PGA1_c32220	0.28	+2.7
3,378,959	+		PGA1_c32220	0.31	+1.0
3,379,028	-		PGA1_c32220	0.36	+1.4
3,379,111	-		PGA1_c32220	0.41	-2.9
3,379,111	-		PGA1_c32220	0.41	-1.9
3,379,111	-		PGA1_c32220	0.41	-1.0
3,379,215	-		PGA1_c32220	0.48	+1.8
3,379,255	+		PGA1_c32220	0.51	+1.8
3,379,279	-		PGA1_c32220	0.52	+2.3
3,379,292	-		PGA1_c32220	0.53	+2.0
3,379,298	+		PGA1_c32220	0.53	+2.5
3,379,306	-		PGA1_c32220	0.54	+2.8
3,379,358	-		PGA1_c32220	0.57	+0.4
3,379,370	-		PGA1_c32220	0.58	-2.5
3,379,431	+		PGA1_c32220	0.62	+3.7
3,379,431	+		PGA1_c32220	0.62	-2.0
3,379,527	-		PGA1_c32220	0.69	-2.4
3,379,537	+		PGA1_c32220	0.69	-2.5
3,379,537	+		PGA1_c32220	0.69	+2.4
3,379,582	+		PGA1_c32220	0.72	+2.4
3,379,585	-		PGA1_c32220	0.72	-1.6
3,379,585	-		PGA1_c32220	0.72	+1.0
3,379,587	+		PGA1_c32220	0.72	+0.4
3,379,592	+		PGA1_c32220	0.73	-1.9
3,379,592	+		PGA1_c32220	0.73	-1.1
3,379,600	-		PGA1_c32220	0.73	-0.0
3,379,717	+		PGA1_c32220	0.81	-1.8
3,379,717	+		PGA1_c32220	0.81	+2.2
3,379,717	+		PGA1_c32220	0.81	+3.0
3,379,729	+		PGA1_c32220	0.82	+0.2
3,379,798	-		PGA1_c32220	0.86	+2.8
3,379,798	-		PGA1_c32220	0.86	+1.8
3,379,810	-		PGA1_c32220	0.87	-0.8
3,379,816	+		PGA1_c32220	0.88	-0.3
3,379,823	-		PGA1_c32220	0.88	-2.6
3,379,853	-				-2.5
3,379,959	+				-0.4
3,379,962	-				+1.4
3,379,997	+				-0.4
3,380,004	-				+3.1
3,380,005	-				+2.4
3,380,016	-				+1.4
3,380,021	-				+0.6
3,380,049	+		PGA1_c32230	0.13	+1.0
3,380,078	-		PGA1_c32230	0.20	-0.4
3,380,100	+		PGA1_c32230	0.26	-1.3
3,380,106	-		PGA1_c32230	0.27	+2.9
3,380,153	-		PGA1_c32230	0.39	-2.3
3,380,326	-		PGA1_c32230	0.84	+1.6
3,380,328	+		PGA1_c32230	0.84	-0.3
3,380,348	+		PGA1_c32230	0.89	-1.8
3,380,349	+		PGA1_c32230	0.90	-2.7
3,380,357	-				+2.0
3,380,689	-		PGA1_c32240	0.19	+0.0
3,380,699	-		PGA1_c32240	0.20	+1.4
3,380,699	-		PGA1_c32240	0.20	-1.9
3,380,699	-		PGA1_c32240	0.20	-2.1
3,380,725	-		PGA1_c32240	0.22	-1.7
3,380,751	+		PGA1_c32240	0.24	-2.1
3,380,760	+		PGA1_c32240	0.24	+1.0
3,380,760	+		PGA1_c32240	0.24	+1.2
3,380,862	+		PGA1_c32240	0.33	-0.3
3,380,894	+		PGA1_c32240	0.35	-1.0
3,380,902	-		PGA1_c32240	0.36	-1.2