Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c31420

Experiment: m.b. Polymyxin B sulfate 0.0032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Polymyxin B sulfate 0.0032 mg/ml
3,282,409	+		PGA1_c31410	0.26	-3.4
3,282,422	-		PGA1_c31410	0.27	+2.8
3,282,422	-		PGA1_c31410	0.27	-2.5
3,282,422	-		PGA1_c31410	0.27	+3.3
3,282,430	+		PGA1_c31410	0.28	+0.0
3,282,484	-		PGA1_c31410	0.32	-0.3
3,282,546	+		PGA1_c31410	0.37	+1.2
3,282,546	+		PGA1_c31410	0.37	-3.2
3,282,546	+		PGA1_c31410	0.37	+3.8
3,282,551	-		PGA1_c31410	0.38	+1.0
3,282,562	+		PGA1_c31410	0.39	+0.2
3,282,616	+		PGA1_c31410	0.43	-2.7
3,282,616	+		PGA1_c31410	0.43	+2.4
3,282,624	-		PGA1_c31410	0.44	-0.1
3,282,624	-		PGA1_c31410	0.44	-2.0
3,282,624	-		PGA1_c31410	0.44	+3.1
3,282,624	-		PGA1_c31410	0.44	+2.6
3,282,707	+		PGA1_c31410	0.51	+1.9
3,282,798	-		PGA1_c31410	0.59	-1.9
3,282,811	+		PGA1_c31410	0.60	-2.3
3,282,844	-		PGA1_c31410	0.62	-1.9
3,282,844	-		PGA1_c31410	0.62	-2.8
3,282,888	+		PGA1_c31410	0.66	-2.2
3,282,907	+		PGA1_c31410	0.68	+2.6
3,282,939	+		PGA1_c31410	0.70	-1.7
3,282,939	+		PGA1_c31410	0.70	-1.5
3,282,947	-		PGA1_c31410	0.71	+1.5
3,282,952	-		PGA1_c31410	0.72	+1.9
3,282,995	+		PGA1_c31410	0.75	+3.3
3,283,085	-		PGA1_c31410	0.83	+2.8
3,283,115	+		PGA1_c31410	0.85	+3.3
3,283,130	+		PGA1_c31410	0.87	+2.6
3,283,131	+		PGA1_c31410	0.87	+2.8
3,283,138	-		PGA1_c31410	0.87	+1.4
3,283,139	-		PGA1_c31410	0.87	+1.2
3,283,235	+				+2.2
3,283,304	-				-1.0
3,283,305	+				+1.9
3,283,313	-				-2.6
3,283,313	-				-0.4
3,283,313	-				+1.9
3,283,328	-				+0.6
3,283,328	-				+3.1
3,283,348	-				+2.0
3,283,356	+				-1.7
3,283,405	+				-2.5
3,283,413	-				-0.7
3,283,413	-				-1.0
3,283,421	+				+0.5
3,283,421	+				-2.4
3,283,421	+				+0.8
3,283,421	+				-0.4
3,283,429	-				-2.9
3,283,429	-				+2.3
3,283,429	-				+2.4
3,283,439	-				-0.8
3,283,467	-				+0.2
3,283,477	+				+2.7
3,283,482	+				-0.8
3,283,497	+		PGA1_c31420	0.11	+1.0
3,283,497	+		PGA1_c31420	0.11	-1.2
3,283,497	+		PGA1_c31420	0.11	+2.3
3,283,505	-		PGA1_c31420	0.12	-0.0
3,283,570	+		PGA1_c31420	0.21	-2.1
3,283,570	+		PGA1_c31420	0.21	+0.9
3,283,578	-		PGA1_c31420	0.22	+1.7
3,283,579	-		PGA1_c31420	0.22	+0.0
3,283,604	+		PGA1_c31420	0.25	+1.5
3,283,726	+		PGA1_c31420	0.41	+1.9
3,283,726	+		PGA1_c31420	0.41	-1.4
3,283,729	-		PGA1_c31420	0.41	-2.5
3,283,729	-		PGA1_c31420	0.41	-1.6
3,283,729	-		PGA1_c31420	0.41	+0.8
3,283,734	-		PGA1_c31420	0.42	+3.0
3,283,737	+		PGA1_c31420	0.42	-0.1
3,283,763	-		PGA1_c31420	0.46	+2.0
3,283,829	+		PGA1_c31420	0.54	+1.9
3,283,829	-		PGA1_c31420	0.54	-2.1
3,283,830	+		PGA1_c31420	0.54	-2.6
3,283,845	+		PGA1_c31420	0.56	+2.5
3,283,845	+		PGA1_c31420	0.56	+3.4
3,283,845	+		PGA1_c31420	0.56	-1.7
3,283,853	-		PGA1_c31420	0.57	+1.1
3,283,853	-		PGA1_c31420	0.57	-1.3
3,283,855	+		PGA1_c31420	0.57	+0.5
3,283,920	-		PGA1_c31420	0.66	-2.4
3,283,920	-		PGA1_c31420	0.66	+2.3
3,283,955	-		PGA1_c31420	0.70	+0.8
3,283,965	-		PGA1_c31420	0.72	+2.8
3,283,968	+		PGA1_c31420	0.72	+2.0
3,283,976	-		PGA1_c31420	0.73	+4.4
3,284,002	-		PGA1_c31420	0.76	-2.2
3,284,020	-		PGA1_c31420	0.79	-2.0
3,284,039	-		PGA1_c31420	0.81	+0.9
3,284,082	-		PGA1_c31420	0.87	+2.0
3,284,148	-				-2.7
3,284,157	+				-1.0
3,284,168	+				-1.4
3,284,179	+				+1.7
3,284,179	+				+0.3
3,284,187	-				+3.2
3,284,189	+				-2.1
3,284,195	+				+1.2
3,284,197	-				+3.3
3,284,197	-				-1.7
3,284,220	-				+2.8
3,284,257	+		PGA1_c31430	0.11	+1.4
3,284,263	-		PGA1_c31430	0.11	+0.6
3,284,338	+		PGA1_c31430	0.21	+1.1
3,284,351	-		PGA1_c31430	0.23	-0.5
3,284,409	-		PGA1_c31430	0.31	+1.2
3,284,445	+		PGA1_c31430	0.36	+1.5
3,284,453	-		PGA1_c31430	0.37	-2.4
3,284,508	+		PGA1_c31430	0.44	+1.6
3,284,528	-		PGA1_c31430	0.47	-1.8
3,284,544	+		PGA1_c31430	0.49	+2.4
3,284,544	+		PGA1_c31430	0.49	-1.7
3,284,552	-		PGA1_c31430	0.50	-0.8
3,284,584	-		PGA1_c31430	0.54	+1.0
3,284,691	+		PGA1_c31430	0.68	+2.1
3,284,691	+		PGA1_c31430	0.68	-2.1
3,284,699	-		PGA1_c31430	0.69	-1.5
3,284,705	-		PGA1_c31430	0.70	+1.5
3,284,705	-		PGA1_c31430	0.70	+2.4
3,284,714	+		PGA1_c31430	0.71	-1.8
3,284,768	-		PGA1_c31430	0.79	-1.9
3,284,769	-		PGA1_c31430	0.79	-1.7
3,284,837	-		PGA1_c31430	0.88	+0.4
3,284,905	-				-2.1
3,284,934	-				+2.9
3,284,952	-				-2.5
3,284,989	+				-1.2
3,285,005	-				+1.0
3,285,010	-				+1.7
3,285,112	-		PGA1_c31440	0.12	-2.0
3,285,112	-		PGA1_c31440	0.12	+2.3
3,285,123	+		PGA1_c31440	0.13	+0.9
3,285,182	+		PGA1_c31440	0.19	-0.2
3,285,185	-		PGA1_c31440	0.19	-2.4