Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c31100

Experiment: m.b. Polymyxin B sulfate 0.0032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Polymyxin B sulfate 0.0032 mg/ml
3,249,154	+		PGA1_c31080	0.57	-1.6
3,249,174	+		PGA1_c31080	0.60	-2.4
3,249,181	-		PGA1_c31080	0.61	+1.3
3,249,181	-		PGA1_c31080	0.61	-0.7
3,249,181	-		PGA1_c31080	0.61	-1.7
3,249,182	-		PGA1_c31080	0.61	+1.7
3,249,182	-		PGA1_c31080	0.61	+1.9
3,249,194	+		PGA1_c31080	0.63	+1.1
3,249,194	+		PGA1_c31080	0.63	-3.5
3,249,282	-		PGA1_c31080	0.76	-3.1
3,249,282	-		PGA1_c31080	0.76	-2.5
3,249,289	+		PGA1_c31080	0.77	-0.6
3,249,297	-		PGA1_c31080	0.78	+3.6
3,249,307	-		PGA1_c31080	0.79	-2.3
3,249,319	-		PGA1_c31080	0.81	+2.0
3,249,319	-		PGA1_c31080	0.81	+1.0
3,249,344	-		PGA1_c31080	0.85	+2.7
3,249,356	+		PGA1_c31080	0.87	-0.4
3,249,366	+		PGA1_c31080	0.88	-0.1
3,249,374	-		PGA1_c31080	0.89	-1.1
3,249,377	+		PGA1_c31080	0.90	-0.9
3,249,377	+		PGA1_c31080	0.90	-1.5
3,249,377	+		PGA1_c31080	0.90	-1.8
3,249,377	+		PGA1_c31080	0.90	-0.7
3,249,385	+				+1.6
3,249,385	-				-3.0
3,249,385	-				+1.7
3,249,385	-				-2.1
3,249,385	-				-0.3
3,249,395	+				-1.0
3,249,432	-				-2.1
3,249,435	+				+2.8
3,249,437	+				-1.1
3,249,489	+				-1.3
3,249,489	+				+2.0
3,249,490	-				+2.7
3,249,499	+				+1.9
3,249,520	+				-0.8
3,249,537	-				-2.9
3,249,547	+				-2.3
3,249,563	+				-1.5
3,249,563	+				-2.5
3,249,563	+				+1.4
3,249,563	+				+0.8
3,249,564	+				+1.8
3,249,564	+				+4.8
3,249,564	+				+0.4
3,249,564	+				+0.4
3,249,566	-				-0.9
3,249,568	-				+2.7
3,249,568	-				+1.9
3,249,568	-				+1.0
3,249,571	-				+1.8
3,249,571	-				+1.2
3,249,572	-				+2.3
3,249,572	-				-1.5
3,249,572	-				-1.2
3,249,583	+				-1.2
3,249,586	-				+1.1
3,249,591	-				+0.8
3,249,613	-				+1.2
3,249,618	+				+0.7
3,249,621	-				-0.1
3,249,631	-				-1.5
3,249,650	+				-1.6
3,249,661	+				-2.8
3,249,661	+				-0.7
3,249,664	+				+1.5
3,249,666	+				+2.5
3,249,669	-				+1.3
3,249,686	+				-1.6
3,249,694	-				+2.5
3,249,754	+				+0.9
3,249,754	+				-2.0
3,249,754	+				-0.5
3,249,759	+				-0.6
3,249,763	-				-3.6
3,249,766	+				+0.8
3,249,766	+				+0.6
3,249,773	-				-1.6
3,249,776	+				+0.9
3,249,776	+				-2.1
3,249,784	-				+0.7
3,249,846	-				-0.2
3,249,846	-				-0.1
3,249,901	-				-1.6
3,249,916	+				+1.3
3,249,935	+				-1.5
3,249,942	+				-1.7
3,249,943	-				-1.7
3,250,178	-		PGA1_c31100	0.16	-2.0
3,250,234	+		PGA1_c31100	0.46	+0.6
3,250,242	-		PGA1_c31100	0.51	+1.6
3,250,245	-		PGA1_c31100	0.52	-1.6
3,250,264	+		PGA1_c31100	0.63	-1.2
3,250,295	+		PGA1_c31100	0.80	-1.2
3,250,315	-				-2.5
3,250,326	+				+1.4
3,250,334	-				-2.6
3,250,339	-				+3.5
3,250,351	+				-1.8
3,250,384	+				-2.4
3,250,390	+				-2.5
3,250,392	-				+1.4
3,250,416	-				-2.7
3,250,416	-				+2.9
3,250,510	+		PGA1_c31110	0.18	+1.1
3,250,510	+		PGA1_c31110	0.18	-1.3
3,250,510	+		PGA1_c31110	0.18	-3.2
3,250,518	-		PGA1_c31110	0.19	-1.1
3,250,568	-		PGA1_c31110	0.23	-1.4
3,250,612	-		PGA1_c31110	0.28	+1.6
3,250,632	-		PGA1_c31110	0.30	-2.2
3,250,661	+		PGA1_c31110	0.33	+2.0
3,250,679	+		PGA1_c31110	0.34	-0.9
3,250,717	-		PGA1_c31110	0.38	-1.0
3,250,761	-		PGA1_c31110	0.42	-0.6
3,250,786	+		PGA1_c31110	0.45	+0.3
3,250,796	-		PGA1_c31110	0.46	-1.6
3,250,807	+		PGA1_c31110	0.47	+0.0
3,250,807	+		PGA1_c31110	0.47	-0.5
3,250,815	-		PGA1_c31110	0.48	-2.3
3,250,921	+		PGA1_c31110	0.58	+2.7
3,250,929	-		PGA1_c31110	0.59	-0.4
3,251,020	+		PGA1_c31110	0.68	-2.3
3,251,033	-		PGA1_c31110	0.69	-2.4
3,251,054	-		PGA1_c31110	0.71	-0.9
3,251,089	+		PGA1_c31110	0.74	-0.4
3,251,089	+		PGA1_c31110	0.74	+0.1
3,251,089	+		PGA1_c31110	0.74	+1.8
3,251,089	+		PGA1_c31110	0.74	-2.1
3,251,092	+		PGA1_c31110	0.75	-1.1
3,251,092	+		PGA1_c31110	0.75	+1.1
3,251,094	+		PGA1_c31110	0.75	+1.4
3,251,100	-		PGA1_c31110	0.75	-1.5
3,251,115	+		PGA1_c31110	0.77	-1.0
3,251,128	-		PGA1_c31110	0.78	-1.9
3,251,138	+		PGA1_c31110	0.79	-2.4
3,251,158	+		PGA1_c31110	0.81	-1.8
3,251,207	+		PGA1_c31110	0.86	-2.5
3,251,294	-				-2.6