Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c30540

Experiment: m.b. Polymyxin B sulfate 0.0032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Polymyxin B sulfate 0.0032 mg/ml
3,187,623	+				-2.0
3,187,645	+				+2.0
3,187,660	+				-0.0
3,187,689	-				-0.6
3,187,731	+		PGA1_c30530	0.14	+0.0
3,187,739	-		PGA1_c30530	0.15	+2.0
3,187,739	-		PGA1_c30530	0.15	+0.3
3,187,777	+		PGA1_c30530	0.20	-0.4
3,187,778	+		PGA1_c30530	0.20	-0.6
3,187,792	-		PGA1_c30530	0.22	+1.1
3,187,800	-		PGA1_c30530	0.23	+2.6
3,187,822	+		PGA1_c30530	0.25	-1.0
3,187,822	+		PGA1_c30530	0.25	-0.4
3,187,822	+		PGA1_c30530	0.25	-2.5
3,187,823	-		PGA1_c30530	0.25	-1.7
3,187,830	+		PGA1_c30530	0.26	-1.4
3,187,830	+		PGA1_c30530	0.26	-2.2
3,187,838	-		PGA1_c30530	0.27	-3.0
3,187,838	-		PGA1_c30530	0.27	+1.8
3,187,856	-		PGA1_c30530	0.29	+1.4
3,187,858	+		PGA1_c30530	0.30	-1.5
3,187,882	+		PGA1_c30530	0.32	-1.8
3,187,900	+		PGA1_c30530	0.35	-0.2
3,187,900	+		PGA1_c30530	0.35	-1.8
3,187,908	-		PGA1_c30530	0.36	+1.8
3,187,937	+		PGA1_c30530	0.39	-2.1
3,187,993	+		PGA1_c30530	0.46	+3.5
3,188,050	-		PGA1_c30530	0.53	-1.7
3,188,061	+		PGA1_c30530	0.54	+1.4
3,188,066	+		PGA1_c30530	0.54	+1.7
3,188,072	+		PGA1_c30530	0.55	+1.9
3,188,090	-		PGA1_c30530	0.57	+2.2
3,188,095	+		PGA1_c30530	0.58	-3.6
3,188,098	-		PGA1_c30530	0.58	-1.1
3,188,103	-		PGA1_c30530	0.59	+0.9
3,188,103	-		PGA1_c30530	0.59	-2.0
3,188,171	-		PGA1_c30530	0.67	-1.0
3,188,221	+		PGA1_c30530	0.73	+0.4
3,188,239	+		PGA1_c30530	0.75	+0.5
3,188,243	-		PGA1_c30530	0.76	+2.6
3,188,250	+		PGA1_c30530	0.76	-2.5
3,188,263	-		PGA1_c30530	0.78	+1.9
3,188,294	+		PGA1_c30530	0.82	-1.6
3,188,342	-		PGA1_c30530	0.87	-0.2
3,188,431	+				+1.9
3,188,431	+				-2.8
3,188,439	-				+0.0
3,188,439	-				+0.4
3,188,439	-				-1.4
3,188,460	+				+1.8
3,188,460	+				-1.0
3,188,460	+				-1.1
3,188,468	-				+3.1
3,188,468	-				+1.8
3,188,484	+				+2.1
3,188,563	-				-2.1
3,189,506	+				+1.2
3,189,599	+				+0.3
3,189,604	+				+2.5
3,189,612	-				+0.9
3,189,612	-				+3.1
3,189,615	+				-1.1
3,189,623	-				+1.0
3,189,652	+				-1.1
3,189,662	+				-0.8
3,189,669	+				+0.5
3,189,670	-				-1.1
3,189,677	+				-2.0
3,189,677	-				+2.8
3,189,686	+				+0.5
3,189,733	+				-1.9
3,189,793	+		PGA1_c30550	0.12	-1.0
3,189,808	+		PGA1_c30550	0.14	-0.9
3,189,808	+		PGA1_c30550	0.14	-2.4
3,189,816	-		PGA1_c30550	0.15	+1.2
3,189,816	-		PGA1_c30550	0.15	-1.9
3,189,836	-		PGA1_c30550	0.17	+1.6
3,189,836	-		PGA1_c30550	0.17	-3.1
3,189,860	+		PGA1_c30550	0.19	-2.1
3,189,915	+		PGA1_c30550	0.25	-1.0
3,189,935	-		PGA1_c30550	0.28	+0.7
3,189,961	-		PGA1_c30550	0.31	+1.6
3,189,976	-		PGA1_c30550	0.32	+2.0
3,189,984	-		PGA1_c30550	0.33	-1.5
3,190,020	-		PGA1_c30550	0.37	-2.9
3,190,020	-		PGA1_c30550	0.37	-0.9
3,190,088	-		PGA1_c30550	0.45	-2.1
3,190,167	+		PGA1_c30550	0.53	+2.2
3,190,177	+		PGA1_c30550	0.54	-0.9
3,190,209	-		PGA1_c30550	0.58	+3.4
3,190,212	-		PGA1_c30550	0.58	+2.2
3,190,264	+		PGA1_c30550	0.64	-2.2
3,190,269	+		PGA1_c30550	0.65	+0.8
3,190,269	+		PGA1_c30550	0.65	+1.9
3,190,269	+		PGA1_c30550	0.65	-2.9
3,190,269	+		PGA1_c30550	0.65	+1.1
3,190,270	-		PGA1_c30550	0.65	-2.8
3,190,277	-		PGA1_c30550	0.66	+0.0
3,190,277	-		PGA1_c30550	0.66	+2.6
3,190,277	-		PGA1_c30550	0.66	+2.5
3,190,277	-		PGA1_c30550	0.66	-1.1
3,190,277	-		PGA1_c30550	0.66	-0.6
3,190,296	+		PGA1_c30550	0.68	-1.7
3,190,296	+		PGA1_c30550	0.68	-1.2
3,190,297	-		PGA1_c30550	0.68	+3.9
3,190,304	-		PGA1_c30550	0.69	-3.0
3,190,305	-		PGA1_c30550	0.69	-1.1
3,190,306	-		PGA1_c30550	0.69	-1.4
3,190,381	-		PGA1_c30550	0.77	-2.2
3,190,425	-		PGA1_c30550	0.82	+2.6
3,190,480	+		PGA1_c30550	0.88	+3.4
3,190,480	+		PGA1_c30550	0.88	-2.1
3,190,480	+		PGA1_c30550	0.88	+2.3
3,190,480	-		PGA1_c30550	0.88	+1.3
3,190,487	+		PGA1_c30550	0.89	+3.6
3,190,488	-		PGA1_c30550	0.89	-0.4
3,190,495	+		PGA1_c30550	0.90	+0.8
3,190,495	-		PGA1_c30550	0.90	-1.1
3,190,500	-				+1.4
3,190,505	+				-2.5
3,190,523	-				-1.8
3,190,528	+				-0.7