Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c30450

Experiment: m.b. Polymyxin B sulfate 0.0032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Polymyxin B sulfate 0.0032 mg/ml
3,179,733	-				-2.6
3,179,767	-		PGA1_c30440	0.12	-3.1
3,179,815	+		PGA1_c30440	0.16	+0.0
3,179,823	-		PGA1_c30440	0.17	+2.0
3,179,830	+		PGA1_c30440	0.18	+2.5
3,179,838	-		PGA1_c30440	0.19	+2.3
3,179,840	-		PGA1_c30440	0.19	+0.7
3,179,869	-		PGA1_c30440	0.22	+0.8
3,179,885	-		PGA1_c30440	0.23	-0.8
3,179,887	+		PGA1_c30440	0.23	+2.7
3,179,953	+		PGA1_c30440	0.30	-0.1
3,180,029	+		PGA1_c30440	0.37	+1.1
3,180,029	+		PGA1_c30440	0.37	+3.1
3,180,082	+		PGA1_c30440	0.42	+1.8
3,180,090	-		PGA1_c30440	0.43	-2.0
3,180,090	-		PGA1_c30440	0.43	-2.5
3,180,262	-		PGA1_c30440	0.60	+2.2
3,180,266	+		PGA1_c30440	0.60	+1.4
3,180,277	+		PGA1_c30440	0.61	+2.6
3,180,327	-		PGA1_c30440	0.66	-1.5
3,180,355	+		PGA1_c30440	0.69	+1.3
3,180,355	+		PGA1_c30440	0.69	+3.1
3,180,361	-		PGA1_c30440	0.69	-0.3
3,180,363	-		PGA1_c30440	0.70	-1.5
3,180,363	-		PGA1_c30440	0.70	-2.3
3,180,363	-		PGA1_c30440	0.70	-0.2
3,180,363	-		PGA1_c30440	0.70	-1.5
3,180,363	-		PGA1_c30440	0.70	-2.5
3,180,363	-		PGA1_c30440	0.70	-1.2
3,180,379	+		PGA1_c30440	0.71	-0.7
3,180,408	+		PGA1_c30440	0.74	+3.4
3,180,416	-		PGA1_c30440	0.75	-0.1
3,180,426	-		PGA1_c30440	0.76	+1.5
3,180,476	+		PGA1_c30440	0.81	-0.9
3,180,486	+		PGA1_c30440	0.81	-1.9
3,180,549	+		PGA1_c30440	0.88	-1.7
3,180,554	-		PGA1_c30440	0.88	+1.2
3,180,557	-		PGA1_c30440	0.88	+0.2
3,180,574	-				+3.5
3,180,594	+				-2.3
3,180,601	-				-2.0
3,180,601	-				+2.2
3,180,636	-				-0.9
3,180,646	+				-2.7
3,180,654	+				-1.2
3,180,683	-				+0.9
3,180,730	-				-3.2
3,180,841	+		PGA1_c30450	0.20	-1.9
3,180,843	-		PGA1_c30450	0.20	+2.4
3,180,895	+		PGA1_c30450	0.28	-3.0
3,180,919	+		PGA1_c30450	0.31	-1.3
3,180,949	-		PGA1_c30450	0.36	+0.7
3,180,954	-		PGA1_c30450	0.37	+2.5
3,180,997	+		PGA1_c30450	0.43	+0.2
3,180,997	+		PGA1_c30450	0.43	+1.0
3,180,997	+		PGA1_c30450	0.43	-0.6
3,180,997	+		PGA1_c30450	0.43	-1.8
3,180,997	+		PGA1_c30450	0.43	-0.9
3,181,005	-		PGA1_c30450	0.44	-1.4
3,181,005	-		PGA1_c30450	0.44	+1.4
3,181,005	-		PGA1_c30450	0.44	+1.3
3,181,005	-		PGA1_c30450	0.44	+2.2
3,181,005	-		PGA1_c30450	0.44	-1.4
3,181,005	-		PGA1_c30450	0.44	+3.5
3,181,030	-		PGA1_c30450	0.48	-2.1
3,181,163	+		PGA1_c30450	0.68	+3.1
3,181,208	+		PGA1_c30450	0.74	-1.8
3,181,211	-		PGA1_c30450	0.75	+0.7
3,181,213	+		PGA1_c30450	0.75	-2.9
3,181,221	-		PGA1_c30450	0.76	+3.1
3,181,223	-		PGA1_c30450	0.76	-1.9
3,181,293	+		PGA1_c30450	0.87	+1.5
3,181,293	+		PGA1_c30450	0.87	-1.8
3,181,301	-		PGA1_c30450	0.88	+2.1
3,181,333	-				+3.7
3,181,333	-				-2.8
3,181,349	-				-0.7
3,181,375	+				-0.7
3,181,394	+				+1.0
3,181,422	+				-0.5
3,181,427	+				+0.7
3,181,540	+				+2.1
3,181,558	-		PGA1_c30460	0.10	+1.2
3,181,589	-		PGA1_c30460	0.14	+1.5
3,181,595	-		PGA1_c30460	0.15	+1.9
3,181,683	+		PGA1_c30460	0.25	-0.8
3,181,683	+		PGA1_c30460	0.25	-1.2
3,181,683	+		PGA1_c30460	0.25	+1.1
3,181,691	-		PGA1_c30460	0.26	-1.8
3,181,691	-		PGA1_c30460	0.26	+0.5
3,181,705	+		PGA1_c30460	0.27	+1.5
3,181,708	-		PGA1_c30460	0.28	+1.3
3,181,708	-		PGA1_c30460	0.28	-2.8
3,181,770	-		PGA1_c30460	0.35	-0.5
3,181,782	+		PGA1_c30460	0.36	+2.1
3,181,833	-		PGA1_c30460	0.42	+0.8
3,181,856	+		PGA1_c30460	0.45	-1.8
3,181,866	+		PGA1_c30460	0.46	-1.9
3,181,869	-		PGA1_c30460	0.46	+2.3
3,181,871	+		PGA1_c30460	0.47	+0.3
3,181,879	+		PGA1_c30460	0.48	+1.2
3,181,879	+		PGA1_c30460	0.48	+0.8
3,181,879	+		PGA1_c30460	0.48	-2.6
3,181,879	+		PGA1_c30460	0.48	-1.5
3,181,879	+		PGA1_c30460	0.48	-1.8
3,181,879	+		PGA1_c30460	0.48	+5.2
3,181,879	+		PGA1_c30460	0.48	+1.8
3,181,887	-		PGA1_c30460	0.48	+0.9
3,181,887	-		PGA1_c30460	0.48	+1.4
3,181,887	-		PGA1_c30460	0.48	-2.4
3,181,935	+		PGA1_c30460	0.54	-1.3
3,181,966	+		PGA1_c30460	0.58	-3.0
3,181,966	+		PGA1_c30460	0.58	+1.9
3,181,966	+		PGA1_c30460	0.58	+2.1
3,181,966	+		PGA1_c30460	0.58	-2.0
3,181,974	-		PGA1_c30460	0.59	-1.2
3,181,974	-		PGA1_c30460	0.59	-2.1
3,181,974	-		PGA1_c30460	0.59	+0.1
3,182,008	+		PGA1_c30460	0.62	+0.8
3,182,047	+		PGA1_c30460	0.67	+2.4
3,182,047	+		PGA1_c30460	0.67	+0.7
3,182,050	-		PGA1_c30460	0.67	-2.0
3,182,055	-		PGA1_c30460	0.68	+1.0
3,182,055	-		PGA1_c30460	0.68	-2.5
3,182,055	-		PGA1_c30460	0.68	+1.0
3,182,064	+		PGA1_c30460	0.69	+0.4
3,182,121	-		PGA1_c30460	0.76	-1.4
3,182,131	+		PGA1_c30460	0.77	-2.9
3,182,136	+		PGA1_c30460	0.77	+0.4
3,182,219	-		PGA1_c30460	0.87	-1.5
3,182,247	-				-3.1
3,182,318	+				-1.6
3,182,339	+				+2.6
3,182,347	+				+4.2
3,182,347	-				+2.2