Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c30420

Experiment: m.b. Polymyxin B sulfate 0.0032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Polymyxin B sulfate 0.0032 mg/ml
3,176,768	+		PGA1_c30400	0.84	+2.3
3,176,775	+		PGA1_c30400	0.85	+0.1
3,176,776	-		PGA1_c30400	0.85	-3.1
3,176,777	-		PGA1_c30400	0.85	+1.0
3,176,806	+		PGA1_c30400	0.87	-2.7
3,176,810	-		PGA1_c30400	0.87	+2.1
3,176,814	-		PGA1_c30400	0.87	+0.1
3,176,816	+		PGA1_c30400	0.87	+2.6
3,176,817	+		PGA1_c30400	0.87	+3.1
3,176,825	-		PGA1_c30400	0.88	-2.4
3,176,829	+		PGA1_c30400	0.88	+0.9
3,177,094	+				+0.9
3,177,453	-		PGA1_c30410	0.73	-1.3
3,177,495	-		PGA1_c30410	0.82	+0.2
3,177,664	+				-0.5
3,177,696	+				-1.4
3,177,713	-				-1.2
3,177,713	-				-1.4
3,177,737	-				-0.4
3,177,737	-				-0.3
3,177,739	+				-3.0
3,177,747	-				-1.2
3,177,773	-				+1.3
3,177,803	+				-2.1
3,177,828	+		PGA1_c30420	0.10	+1.4
3,177,836	-		PGA1_c30420	0.11	+2.0
3,177,836	-		PGA1_c30420	0.11	+2.2
3,177,845	+		PGA1_c30420	0.12	+1.2
3,177,860	+		PGA1_c30420	0.13	+2.9
3,177,894	+		PGA1_c30420	0.16	-0.4
3,177,899	+		PGA1_c30420	0.16	-0.3
3,177,899	+		PGA1_c30420	0.16	-0.8
3,177,907	-		PGA1_c30420	0.17	+1.8
3,177,958	+		PGA1_c30420	0.22	-1.5
3,177,966	-		PGA1_c30420	0.22	+2.1
3,177,977	+		PGA1_c30420	0.23	-1.4
3,177,994	-		PGA1_c30420	0.25	-1.6
3,178,005	-		PGA1_c30420	0.26	-2.2
3,178,011	-		PGA1_c30420	0.26	+2.4
3,178,027	-		PGA1_c30420	0.28	+0.6
3,178,152	+		PGA1_c30420	0.39	-2.1
3,178,152	+		PGA1_c30420	0.39	+0.9
3,178,152	+		PGA1_c30420	0.39	+2.1
3,178,152	+		PGA1_c30420	0.39	-1.7
3,178,152	+		PGA1_c30420	0.39	+1.7
3,178,152	+		PGA1_c30420	0.39	+0.1
3,178,160	-		PGA1_c30420	0.40	+0.6
3,178,176	-		PGA1_c30420	0.41	+4.0
3,178,187	+		PGA1_c30420	0.42	-1.2
3,178,217	-		PGA1_c30420	0.45	-2.5
3,178,265	+		PGA1_c30420	0.49	+2.5
3,178,389	+		PGA1_c30420	0.60	-1.1
3,178,389	+		PGA1_c30420	0.60	-0.6
3,178,389	+		PGA1_c30420	0.60	-0.3
3,178,397	-		PGA1_c30420	0.61	-2.0
3,178,397	-		PGA1_c30420	0.61	-0.9
3,178,438	-		PGA1_c30420	0.65	+2.6
3,178,438	-		PGA1_c30420	0.65	+2.9
3,178,438	-		PGA1_c30420	0.65	+2.1
3,178,438	-		PGA1_c30420	0.65	+2.2
3,178,494	-		PGA1_c30420	0.70	-1.7
3,178,510	-		PGA1_c30420	0.71	-1.5
3,178,510	-		PGA1_c30420	0.71	-1.3
3,178,545	+		PGA1_c30420	0.74	+2.2
3,178,582	+		PGA1_c30420	0.78	-1.6
3,178,600	+		PGA1_c30420	0.79	-0.7
3,178,638	+		PGA1_c30420	0.83	+3.0
3,178,643	+		PGA1_c30420	0.83	-0.5
3,178,646	-		PGA1_c30420	0.83	-2.4
3,178,657	-		PGA1_c30420	0.84	-1.5
3,178,667	-		PGA1_c30420	0.85	-1.7
3,178,721	-				+1.0
3,178,740	+				+0.7
3,178,787	+				+2.7
3,178,788	-				-2.3
3,178,788	-				-2.7
3,178,795	-				+0.7
3,178,809	+				-2.4
3,178,862	-				+1.9
3,178,867	-				-2.4
3,178,867	-				+1.0
3,178,876	+				+3.1
3,178,876	+				-1.4
3,178,876	+				+0.4
3,178,882	-				-2.4
3,178,924	+				+1.9
3,178,965	-				+2.7
3,178,974	-				+2.3
3,178,992	-				+2.8
3,179,009	-				+0.6
3,179,038	-		PGA1_c30430	0.14	-2.5
3,179,057	+		PGA1_c30430	0.18	-1.8
3,179,067	-		PGA1_c30430	0.19	+1.5
3,179,073	-		PGA1_c30430	0.20	-1.6
3,179,122	+		PGA1_c30430	0.28	+2.2
3,179,122	-		PGA1_c30430	0.28	-2.4
3,179,143	-		PGA1_c30430	0.32	-0.8
3,179,145	+		PGA1_c30430	0.32	-1.6
3,179,150	+		PGA1_c30430	0.33	-1.1
3,179,150	+		PGA1_c30430	0.33	-2.1
3,179,158	-		PGA1_c30430	0.34	+1.1
3,179,198	+		PGA1_c30430	0.41	+2.4
3,179,198	+		PGA1_c30430	0.41	+0.8
3,179,203	+		PGA1_c30430	0.42	-0.5
3,179,216	-		PGA1_c30430	0.44	-1.0
3,179,248	-		PGA1_c30430	0.49	-2.7
3,179,248	-		PGA1_c30430	0.49	+4.3
3,179,308	+		PGA1_c30430	0.59	+2.1
3,179,309	-		PGA1_c30430	0.60	-2.4
3,179,333	-		PGA1_c30430	0.64	+2.8
3,179,370	+		PGA1_c30430	0.70	-2.4
3,179,370	+		PGA1_c30430	0.70	+2.3
3,179,370	+		PGA1_c30430	0.70	+2.2
3,179,378	-		PGA1_c30430	0.71	+0.4
3,179,415	+		PGA1_c30430	0.77	-0.9
3,179,423	-		PGA1_c30430	0.79	+2.6
3,179,423	-		PGA1_c30430	0.79	+1.4
3,179,461	-		PGA1_c30430	0.85	+0.9
3,179,481	+		PGA1_c30430	0.88	-3.0
3,179,483	+		PGA1_c30430	0.89	+1.5
3,179,509	+				+0.8
3,179,514	+				+1.2
3,179,522	-				-2.1
3,179,553	+				+0.9
3,179,553	+				+5.0
3,179,624	-				-1.3
3,179,624	-				-1.8
3,179,692	+				-1.3
3,179,692	+				-0.8
3,179,692	+				-0.4
3,179,692	+				+3.0
3,179,692	+				-1.7
3,179,700	-				-1.3
3,179,700	-				-1.3
3,179,700	-				-2.6
3,179,700	-				-0.6
3,179,700	-				-0.3
3,179,700	-				+1.7
3,179,733	-				-2.6
3,179,767	-		PGA1_c30440	0.12	-3.1
3,179,815	+		PGA1_c30440	0.16	+0.0
3,179,823	-		PGA1_c30440	0.17	+2.0
3,179,830	+		PGA1_c30440	0.18	+2.5