Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c30400

Experiment: m.b. Polymyxin B sulfate 0.0032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Polymyxin B sulfate 0.0032 mg/ml
3,174,427	-		PGA1_c30390	0.15	+0.1
3,174,427	-		PGA1_c30390	0.15	-1.7
3,174,427	-		PGA1_c30390	0.15	-1.5
3,174,432	-		PGA1_c30390	0.15	-2.7
3,174,450	-		PGA1_c30390	0.17	-3.2
3,174,472	-		PGA1_c30390	0.20	-1.8
3,174,510	-		PGA1_c30390	0.24	-1.4
3,174,587	+		PGA1_c30390	0.32	-2.5
3,174,587	+		PGA1_c30390	0.32	-1.6
3,174,664	-		PGA1_c30390	0.41	-2.1
3,174,711	+		PGA1_c30390	0.46	-2.6
3,174,859	-		PGA1_c30390	0.62	-1.3
3,174,870	-		PGA1_c30390	0.63	-2.4
3,174,882	-		PGA1_c30390	0.64	-1.5
3,174,896	+		PGA1_c30390	0.66	-1.0
3,174,953	-		PGA1_c30390	0.72	-2.4
3,174,953	-		PGA1_c30390	0.72	-0.9
3,174,971	+		PGA1_c30390	0.74	+0.3
3,174,984	+		PGA1_c30390	0.75	-1.2
3,175,064	-		PGA1_c30390	0.84	-0.1
3,175,072	-		PGA1_c30390	0.85	-3.3
3,175,150	-				-2.7
3,175,152	+				-2.5
3,175,160	-				-1.6
3,175,160	-				-3.0
3,175,160	-				+0.3
3,175,203	+				-1.9
3,175,208	+				-0.3
3,175,208	+				+3.9
3,175,211	-				+0.7
3,175,216	-				+3.4
3,175,216	-				-2.0
3,175,216	-				-1.6
3,175,216	-				-0.7
3,175,216	-				-0.8
3,175,234	-				-1.5
3,175,324	+				-0.4
3,175,329	-				-0.6
3,175,400	-				+1.7
3,175,405	+				-3.1
3,175,537	+				+1.2
3,175,591	+		PGA1_c30400	0.10	-1.5
3,175,609	+		PGA1_c30400	0.11	+1.8
3,175,658	+		PGA1_c30400	0.15	-0.9
3,175,683	-		PGA1_c30400	0.16	+3.7
3,175,734	-		PGA1_c30400	0.19	+1.2
3,175,760	-		PGA1_c30400	0.21	-1.4
3,175,810	-		PGA1_c30400	0.24	+2.5
3,175,836	+		PGA1_c30400	0.26	-0.1
3,175,839	-		PGA1_c30400	0.26	+2.4
3,175,887	+		PGA1_c30400	0.29	-4.6
3,175,938	+		PGA1_c30400	0.32	+0.3
3,175,944	-		PGA1_c30400	0.33	-2.5
3,175,946	-		PGA1_c30400	0.33	-2.1
3,175,948	+		PGA1_c30400	0.33	-1.3
3,175,987	-		PGA1_c30400	0.35	-0.7
3,176,045	-		PGA1_c30400	0.39	-0.1
3,176,107	+		PGA1_c30400	0.43	+2.3
3,176,115	-		PGA1_c30400	0.43	-1.1
3,176,115	-		PGA1_c30400	0.43	-2.4
3,176,115	-		PGA1_c30400	0.43	-3.5
3,176,150	+		PGA1_c30400	0.45	+1.8
3,176,158	-		PGA1_c30400	0.46	+0.7
3,176,159	+		PGA1_c30400	0.46	-1.6
3,176,167	-		PGA1_c30400	0.47	+3.2
3,176,178	-		PGA1_c30400	0.47	+2.3
3,176,191	-		PGA1_c30400	0.48	+1.6
3,176,199	-		PGA1_c30400	0.49	+1.4
3,176,199	-		PGA1_c30400	0.49	-0.6
3,176,220	+		PGA1_c30400	0.50	-3.4
3,176,229	+		PGA1_c30400	0.50	+0.7
3,176,233	-		PGA1_c30400	0.51	+2.1
3,176,233	-		PGA1_c30400	0.51	+0.3
3,176,238	-		PGA1_c30400	0.51	-2.4
3,176,266	-		PGA1_c30400	0.53	-1.1
3,176,266	-		PGA1_c30400	0.53	-0.5
3,176,304	+		PGA1_c30400	0.55	+1.8
3,176,312	-		PGA1_c30400	0.56	-0.8
3,176,321	-		PGA1_c30400	0.56	-2.4
3,176,323	+		PGA1_c30400	0.56	-0.8
3,176,393	-		PGA1_c30400	0.61	-2.5
3,176,444	-		PGA1_c30400	0.64	-1.4
3,176,456	+		PGA1_c30400	0.65	+0.3
3,176,492	-		PGA1_c30400	0.67	+1.1
3,176,492	-		PGA1_c30400	0.67	-0.7
3,176,514	+		PGA1_c30400	0.68	-1.4
3,176,545	+		PGA1_c30400	0.70	+0.1
3,176,558	-		PGA1_c30400	0.71	+1.8
3,176,560	+		PGA1_c30400	0.71	-0.7
3,176,565	+		PGA1_c30400	0.72	-1.6
3,176,573	-		PGA1_c30400	0.72	-1.0
3,176,617	+		PGA1_c30400	0.75	-1.5
3,176,617	+		PGA1_c30400	0.75	-1.6
3,176,617	+		PGA1_c30400	0.75	-1.6
3,176,617	+		PGA1_c30400	0.75	+3.0
3,176,617	+		PGA1_c30400	0.75	+1.0
3,176,617	+		PGA1_c30400	0.75	+1.5
3,176,625	-		PGA1_c30400	0.75	-1.4
3,176,648	-		PGA1_c30400	0.77	-1.8
3,176,658	-		PGA1_c30400	0.77	+2.1
3,176,676	-		PGA1_c30400	0.79	-1.2
3,176,676	-		PGA1_c30400	0.79	+2.8
3,176,694	-		PGA1_c30400	0.80	+0.5
3,176,768	+		PGA1_c30400	0.84	+2.3
3,176,775	+		PGA1_c30400	0.85	+0.1
3,176,776	-		PGA1_c30400	0.85	-3.1
3,176,777	-		PGA1_c30400	0.85	+1.0
3,176,806	+		PGA1_c30400	0.87	-2.7
3,176,810	-		PGA1_c30400	0.87	+2.1
3,176,814	-		PGA1_c30400	0.87	+0.1
3,176,816	+		PGA1_c30400	0.87	+2.6
3,176,817	+		PGA1_c30400	0.87	+3.1
3,176,825	-		PGA1_c30400	0.88	-2.4
3,176,829	+		PGA1_c30400	0.88	+0.9
3,177,094	+				+0.9
3,177,453	-		PGA1_c30410	0.73	-1.3
3,177,495	-		PGA1_c30410	0.82	+0.2
3,177,664	+				-0.5
3,177,696	+				-1.4
3,177,713	-				-1.2
3,177,713	-				-1.4
3,177,737	-				-0.4
3,177,737	-				-0.3
3,177,739	+				-3.0
3,177,747	-				-1.2
3,177,773	-				+1.3
3,177,803	+				-2.1
3,177,828	+		PGA1_c30420	0.10	+1.4
3,177,836	-		PGA1_c30420	0.11	+2.0
3,177,836	-		PGA1_c30420	0.11	+2.2
3,177,845	+		PGA1_c30420	0.12	+1.2
3,177,860	+		PGA1_c30420	0.13	+2.9
3,177,894	+		PGA1_c30420	0.16	-0.4
3,177,899	+		PGA1_c30420	0.16	-0.3
3,177,899	+		PGA1_c30420	0.16	-0.8
3,177,907	-		PGA1_c30420	0.17	+1.8
3,177,958	+		PGA1_c30420	0.22	-1.5
3,177,966	-		PGA1_c30420	0.22	+2.1
3,177,977	+		PGA1_c30420	0.23	-1.4
3,177,994	-		PGA1_c30420	0.25	-1.6
3,178,005	-		PGA1_c30420	0.26	-2.2
3,178,011	-		PGA1_c30420	0.26	+2.4