Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c30290

Experiment: m.b. Polymyxin B sulfate 0.0032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Polymyxin B sulfate 0.0032 mg/ml
3,166,882	+				-1.7
3,166,988	-		PGA1_c30270	0.22	+3.7
3,167,022	-		PGA1_c30270	0.31	+2.1
3,167,055	-		PGA1_c30270	0.40	+0.7
3,167,055	-		PGA1_c30270	0.40	-1.4
3,167,056	+		PGA1_c30270	0.40	+1.5
3,167,061	+		PGA1_c30270	0.42	+1.6
3,167,066	+		PGA1_c30270	0.43	-1.8
3,167,069	-		PGA1_c30270	0.44	+1.1
3,167,069	-		PGA1_c30270	0.44	-1.3
3,167,105	+		PGA1_c30270	0.53	-0.5
3,167,111	+		PGA1_c30270	0.55	+0.8
3,167,172	+		PGA1_c30270	0.71	-0.3
3,167,179	+		PGA1_c30270	0.73	+0.9
3,167,194	+		PGA1_c30270	0.77	-1.8
3,167,202	-		PGA1_c30270	0.79	+1.9
3,167,202	-		PGA1_c30270	0.79	+1.1
3,167,234	+		PGA1_c30270	0.88	+1.5
3,167,267	+				+1.8
3,167,267	+				+2.8
3,167,299	+				-1.7
3,167,373	-		PGA1_c30280	0.24	-2.4
3,167,380	+		PGA1_c30280	0.26	-0.6
3,167,385	+		PGA1_c30280	0.28	+1.1
3,167,388	-		PGA1_c30280	0.28	+2.4
3,167,390	+		PGA1_c30280	0.29	-2.3
3,167,419	+		PGA1_c30280	0.37	+0.8
3,167,419	+		PGA1_c30280	0.37	+2.5
3,167,419	+		PGA1_c30280	0.37	-0.0
3,167,419	+		PGA1_c30280	0.37	-2.8
3,167,427	-		PGA1_c30280	0.40	+0.8
3,167,427	-		PGA1_c30280	0.40	-2.0
3,167,515	+		PGA1_c30280	0.65	+2.4
3,167,515	+		PGA1_c30280	0.65	-2.1
3,167,515	+		PGA1_c30280	0.65	-1.8
3,167,523	-		PGA1_c30280	0.68	+1.3
3,167,537	+		PGA1_c30280	0.72	+0.7
3,167,547	+		PGA1_c30280	0.74	+1.8
3,167,547	+		PGA1_c30280	0.74	-0.5
3,167,547	+		PGA1_c30280	0.74	-1.1
3,167,547	+		PGA1_c30280	0.74	+2.5
3,167,547	+		PGA1_c30280	0.74	+1.2
3,167,547	+		PGA1_c30280	0.74	+1.1
3,167,555	-		PGA1_c30280	0.77	-3.2
3,167,555	-		PGA1_c30280	0.77	+1.6
3,167,602	+				+2.4
3,167,604	-				-2.5
3,167,610	-				+0.8
3,167,633	+				+3.1
3,167,636	-				-1.7
3,167,655	+				+2.4
3,167,655	+				+0.6
3,167,655	+				+2.6
3,167,655	+				-1.8
3,167,655	+				-1.6
3,167,663	-				-1.1
3,167,663	-				-3.4
3,167,718	-				+0.9
3,167,734	+				-2.1
3,167,743	+				+0.8
3,167,758	-				+3.2
3,167,762	+				+1.0
3,167,780	-				+2.8
3,167,802	-				+1.3
3,167,850	-				+0.7
3,167,978	+		PGA1_c30290	0.29	-0.7
3,167,986	-		PGA1_c30290	0.30	-2.3
3,167,986	-		PGA1_c30290	0.30	+0.1
3,168,009	+		PGA1_c30290	0.34	-2.5
3,168,009	+		PGA1_c30290	0.34	+1.3
3,168,017	-		PGA1_c30290	0.36	-3.0
3,168,017	-		PGA1_c30290	0.36	-1.4
3,168,028	+		PGA1_c30290	0.38	-1.3
3,168,028	+		PGA1_c30290	0.38	-1.7
3,168,028	+		PGA1_c30290	0.38	+2.3
3,168,028	+		PGA1_c30290	0.38	-0.8
3,168,028	+		PGA1_c30290	0.38	-1.5
3,168,036	-		PGA1_c30290	0.39	+1.6
3,168,036	-		PGA1_c30290	0.39	-0.1
3,168,169	-		PGA1_c30290	0.61	+1.0
3,168,309	-		PGA1_c30290	0.84	-2.6
3,168,396	+				+2.4
3,168,423	+				-2.8
3,168,423	+				+2.0
3,168,423	+				-2.5
3,168,423	+				+2.0
3,168,423	+				+0.4
3,168,423	+				+0.9
3,168,423	+				+0.7
3,168,423	+				-2.8
3,168,431	-				+2.1
3,168,431	-				-1.6
3,168,431	-				-1.4
3,168,431	-				+1.4
3,168,443	+				+0.9
3,168,446	-				+1.1
3,168,446	-				-2.3
3,168,464	+				-1.6
3,168,464	+				-2.3
3,168,477	-				-1.1
3,168,477	-				-0.0
3,168,524	-				-2.5
3,168,727	+				+3.2
3,168,727	+				+1.7
3,168,773	-				-2.0
3,168,781	+				+1.3
3,168,783	-				-2.2
3,168,783	-				+3.4
3,168,790	-				+0.2
3,168,873	+				+1.9
3,169,060	-		PGA1_c30310	0.18	+3.0
3,169,083	+		PGA1_c30310	0.21	+2.5
3,169,084	+		PGA1_c30310	0.21	+2.1
3,169,089	-		PGA1_c30310	0.22	-1.4
3,169,091	-		PGA1_c30310	0.22	+2.0
3,169,123	+		PGA1_c30310	0.26	-0.9
3,169,131	-		PGA1_c30310	0.27	-1.6