Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c30030

Experiment: m.b. Polymyxin B sulfate 0.0032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Polymyxin B sulfate 0.0032 mg/ml
3,137,780	-		PGA1_c30010	0.62	-1.4
3,137,794	-		PGA1_c30010	0.64	-0.3
3,137,816	+		PGA1_c30010	0.67	-2.4
3,137,819	-		PGA1_c30010	0.68	+0.7
3,137,819	-		PGA1_c30010	0.68	+0.8
3,137,819	-		PGA1_c30010	0.68	-1.1
3,137,824	-		PGA1_c30010	0.68	-1.4
3,137,824	-		PGA1_c30010	0.68	+1.0
3,137,824	-		PGA1_c30010	0.68	+0.9
3,137,824	-		PGA1_c30010	0.68	+1.5
3,137,913	-		PGA1_c30010	0.81	+0.3
3,137,929	+		PGA1_c30010	0.83	-1.8
3,137,937	-		PGA1_c30010	0.84	-2.8
3,137,962	+		PGA1_c30010	0.88	-0.7
3,138,028	+				+0.2
3,138,031	-				+1.3
3,138,041	+				-0.3
3,138,046	+				-1.8
3,138,053	-				-1.8
3,138,055	+				-0.7
3,138,055	+				-2.1
3,138,055	+				-2.2
3,138,055	+				-2.3
3,138,055	+				+2.7
3,138,055	+				+0.6
3,138,055	+				-2.5
3,138,055	+				+1.2
3,138,055	+				-2.3
3,138,055	+				+2.4
3,138,063	-				+1.2
3,138,063	-				+1.2
3,138,063	-				-1.8
3,138,063	-				+3.1
3,138,063	-				+3.5
3,138,063	-				-2.8
3,138,063	-				+2.0
3,138,063	-				-3.5
3,138,063	-				+2.3
3,138,063	-				+2.7
3,138,074	+				+1.3
3,138,081	+				-2.1
3,138,081	+				+0.5
3,138,081	+				+0.6
3,138,082	-				+1.6
3,138,086	+				+4.1
3,138,089	-				-0.1
3,138,094	-				-1.5
3,138,101	-				-2.1
3,138,140	+		PGA1_c30020	0.14	+3.2
3,138,142	-		PGA1_c30020	0.15	-2.2
3,138,186	+		PGA1_c30020	0.28	-1.8
3,138,198	-		PGA1_c30020	0.32	+3.5
3,138,225	-		PGA1_c30020	0.40	-1.1
3,138,232	+		PGA1_c30020	0.42	-2.5
3,138,279	+		PGA1_c30020	0.55	-1.3
3,138,279	+		PGA1_c30020	0.55	-0.8
3,138,287	-		PGA1_c30020	0.58	+0.4
3,138,361	-		PGA1_c30020	0.80	+1.7
3,138,376	-		PGA1_c30020	0.84	-0.5
3,138,384	+		PGA1_c30020	0.86	+2.0
3,138,384	+		PGA1_c30020	0.86	-1.9
3,138,384	+		PGA1_c30020	0.86	-0.5
3,138,384	+		PGA1_c30020	0.86	+5.0
3,138,389	+		PGA1_c30020	0.88	-0.3
3,138,392	-		PGA1_c30020	0.89	+3.2
3,138,392	-		PGA1_c30020	0.89	+0.6
3,138,392	-		PGA1_c30020	0.89	+1.2
3,138,392	-		PGA1_c30020	0.89	+1.0
3,138,392	-		PGA1_c30020	0.89	-2.5
3,138,392	-		PGA1_c30020	0.89	+1.3
3,138,392	-		PGA1_c30020	0.89	+3.7
3,138,397	-				-1.7
3,138,423	+				+0.3
3,138,425	-				-1.5
3,138,431	-				+2.1
3,138,498	+				+1.4
3,138,512	-				-2.5
3,138,523	-				-1.2
3,138,533	+				+1.1
3,138,533	+				-2.0
3,138,543	+				+0.0
3,138,549	+				-2.5
3,138,549	-				-1.4
3,138,550	+				-0.8
3,138,550	+				-2.7
3,138,550	+				-0.3
3,138,550	+				+2.0
3,138,557	-				-3.5
3,138,558	-				-0.2
3,138,558	-				-2.3
3,138,558	-				-2.0
3,138,558	-				-3.2
3,138,583	+				-1.8
3,138,608	+				-0.8
3,138,641	+				-1.0
3,138,649	-				-0.4
3,138,694	+				-2.2
3,138,695	+				-1.9
3,138,700	+				-1.7
3,138,700	+				-2.1
3,138,700	+				-0.7
3,138,700	+				-0.5
3,138,702	-				-0.5
3,138,708	-				-1.3
3,138,708	-				-0.7
3,138,708	-				-2.2
3,138,708	-				-1.5
3,140,429	+				-1.8
3,140,484	+		PGA1_c30040	0.33	-2.0
3,140,511	+		PGA1_c30040	0.50	+0.3
3,140,516	+		PGA1_c30040	0.53	-2.8
3,140,516	+		PGA1_c30040	0.53	+1.4
3,140,516	+		PGA1_c30040	0.53	+0.1
3,140,521	+		PGA1_c30040	0.57	-1.6
3,140,524	-		PGA1_c30040	0.58	-0.8
3,140,524	-		PGA1_c30040	0.58	+1.2
3,140,524	-		PGA1_c30040	0.58	-1.5
3,140,524	-		PGA1_c30040	0.58	-1.5
3,140,529	-		PGA1_c30040	0.62	+0.8
3,140,543	-		PGA1_c30040	0.70	+0.0
3,140,589	+				+0.2
3,140,592	-				-0.1
3,140,602	+				-1.9
3,140,607	+				-2.8
3,140,676	+				-0.1
3,140,684	-				+1.6
3,140,716	+				-0.6
3,140,800	-				+2.2
3,140,803	-				-2.2
3,140,805	-				-2.9
3,140,894	+		PGA1_c30050	0.12	+1.5
3,140,922	+		PGA1_c30050	0.14	-0.0
3,140,949	+		PGA1_c30050	0.15	+0.7
3,140,963	-		PGA1_c30050	0.15	-2.5
3,141,078	-		PGA1_c30050	0.21	-1.3
3,141,102	+		PGA1_c30050	0.22	+2.2
3,141,108	+		PGA1_c30050	0.22	-1.1
3,141,173	-		PGA1_c30050	0.25	+0.9
3,141,217	+		PGA1_c30050	0.27	+0.9
3,141,225	-		PGA1_c30050	0.28	+2.1
3,141,245	-		PGA1_c30050	0.28	+1.2
3,141,324	-		PGA1_c30050	0.32	-0.6
3,141,332	+		PGA1_c30050	0.32	-1.6