Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c26330

Experiment: m.b. Polymyxin B sulfate 0.0032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Polymyxin B sulfate 0.0032 mg/ml
2,741,429	+		PGA1_c26310	0.72	+1.2
2,741,429	+		PGA1_c26310	0.72	+2.7
2,741,437	+		PGA1_c26310	0.75	-0.9
2,741,437	+		PGA1_c26310	0.75	+2.1
2,741,445	-		PGA1_c26310	0.78	+1.2
2,741,447	+		PGA1_c26310	0.79	-2.5
2,741,447	+		PGA1_c26310	0.79	+1.0
2,741,455	-		PGA1_c26310	0.82	+3.3
2,741,484	+				+0.1
2,741,493	+				-2.8
2,741,493	+				-1.6
2,741,493	+				+0.4
2,741,493	+				-2.0
2,741,493	+				-2.6
2,741,493	+				-0.6
2,741,493	+				+1.9
2,741,495	+				+2.7
2,741,501	-				+3.2
2,741,501	-				+3.6
2,741,546	+				+1.8
2,741,551	+				-1.6
2,741,554	-				+2.9
2,741,559	-				+2.1
2,741,559	-				+1.0
2,741,559	-				-2.5
2,741,559	-				-0.3
2,741,618	+				+3.1
2,741,624	+				+1.6
2,741,625	-				-0.2
2,741,626	-				+3.4
2,741,626	-				+0.3
2,741,632	-				+0.7
2,741,641	+				-2.1
2,741,641	+				-2.6
2,741,641	+				+0.5
2,741,641	+				-1.4
2,741,649	-				+1.7
2,741,649	-				+0.8
2,741,673	-				+0.4
2,741,686	+				+2.0
2,741,686	+				-2.0
2,741,694	-				+1.1
2,741,694	-				+1.1
2,741,699	+				+0.6
2,741,701	+				-0.9
2,741,707	-				-1.7
2,741,707	-				-3.1
2,741,709	+				-2.1
2,741,709	+				+1.9
2,741,709	+				-2.6
2,741,709	+				-2.6
2,741,709	+				-2.3
2,741,709	+				-1.3
2,741,709	+				+0.3
2,741,709	+				+0.9
2,741,709	-				-1.9
2,741,709	-				-1.1
2,741,717	-				+0.5
2,741,717	-				+3.8
2,741,717	-				+2.6
2,741,717	-				+0.5
2,741,717	-				+1.2
2,741,731	-				+0.2
2,741,731	-				-1.6
2,741,750	+		PGA1_c26320	0.16	-2.9
2,741,750	+		PGA1_c26320	0.16	-0.9
2,741,767	-		PGA1_c26320	0.26	+3.5
2,741,772	+		PGA1_c26320	0.29	+1.8
2,741,787	+		PGA1_c26320	0.38	+1.0
2,741,790	-		PGA1_c26320	0.40	+1.7
2,741,790	-		PGA1_c26320	0.40	+0.4
2,741,795	-		PGA1_c26320	0.43	-1.1
2,741,795	-		PGA1_c26320	0.43	-0.1
2,741,795	-		PGA1_c26320	0.43	-2.1
2,741,795	-		PGA1_c26320	0.43	-1.6
2,741,806	+		PGA1_c26320	0.49	-2.1
2,741,814	-		PGA1_c26320	0.54	-0.5
2,741,825	-		PGA1_c26320	0.61	+1.8
2,741,920	-				+1.3
2,741,988	+				+3.3
2,742,103	+				-1.1
2,742,103	+				-3.2
2,742,103	+				-0.3
2,742,103	+				+2.3
2,742,103	+				-0.8
2,742,103	+				-0.2
2,742,103	+				-1.3
2,742,103	+				+0.8
2,742,103	+				-0.5
2,742,103	+				-1.5
2,742,103	+				+0.3
2,742,111	-				-2.0
2,742,111	-				-2.4
2,742,111	-				-1.8
2,742,111	-				-2.6
2,742,111	-				+2.2
2,742,111	-				+3.0
2,742,113	-				-1.1
2,742,164	-				-1.0
2,742,169	+				-0.1
2,742,204	+				+1.1
2,742,212	-				+1.2
2,742,214	+				+1.3
2,742,216	+				+1.7
2,742,224	-				+1.2
2,742,224	-				-1.4
2,742,226	+				+2.2
2,742,287	-				+0.7
2,742,314	-				-1.3
2,742,378	+				-2.7
2,742,430	-		PGA1_c26330	0.11	-0.7
2,742,444	-		PGA1_c26330	0.15	-2.6
2,742,444	-		PGA1_c26330	0.15	+2.4
2,742,500	+		PGA1_c26330	0.28	-0.6
2,742,513	-		PGA1_c26330	0.31	-0.8
2,742,514	+		PGA1_c26330	0.31	+1.7
2,742,527	+		PGA1_c26330	0.34	-1.3
2,742,599	+		PGA1_c26330	0.51	+1.7
2,742,600	+		PGA1_c26330	0.51	+3.7
2,742,600	+		PGA1_c26330	0.51	-3.8
2,742,600	+		PGA1_c26330	0.51	-1.8
2,742,600	+		PGA1_c26330	0.51	-2.0
2,742,600	+		PGA1_c26330	0.51	+1.7
2,742,600	+		PGA1_c26330	0.51	+1.3
2,742,600	+		PGA1_c26330	0.51	+2.8
2,742,608	-		PGA1_c26330	0.53	-2.5
2,742,608	-		PGA1_c26330	0.53	+1.7
2,742,608	-		PGA1_c26330	0.53	-1.8
2,742,608	-		PGA1_c26330	0.53	+3.4
2,742,608	-		PGA1_c26330	0.53	+1.7
2,742,664	-		PGA1_c26330	0.66	+0.4
2,742,668	-		PGA1_c26330	0.67	-2.1
2,742,688	-		PGA1_c26330	0.72	+2.7
2,742,771	+				-3.0
2,742,771	+				+2.6
2,742,771	+				+1.6
2,742,771	+				+1.0
2,742,787	+				-0.8
2,742,858	+				-2.3
2,742,889	-				-2.2
2,742,915	+				-0.1
2,742,950	+				+0.9
2,742,958	-				+1.0
2,742,971	+				+2.6
2,742,990	-				+3.0
2,743,036	-				+2.3
2,743,036	-				+2.9
2,743,196	-		PGA1_c26340	0.22	+1.6
2,743,196	-		PGA1_c26340	0.22	-1.9
2,743,196	-		PGA1_c26340	0.22	+2.4
2,743,228	+		PGA1_c26340	0.24	-0.5
2,743,273	-		PGA1_c26340	0.28	+1.8
2,743,274	+		PGA1_c26340	0.28	-1.6
2,743,279	+		PGA1_c26340	0.28	+0.8
2,743,282	-		PGA1_c26340	0.29	-0.5
2,743,287	-		PGA1_c26340	0.29	+2.3
2,743,301	+		PGA1_c26340	0.30	+1.7
2,743,309	-		PGA1_c26340	0.31	+1.0
2,743,362	+		PGA1_c26340	0.35	+1.5
2,743,362	+		PGA1_c26340	0.35	+1.0
2,743,370	-		PGA1_c26340	0.36	-2.2
2,743,370	-		PGA1_c26340	0.36	-2.0
2,743,370	-		PGA1_c26340	0.36	+2.4
2,743,411	+		PGA1_c26340	0.39	+1.6
2,743,411	-		PGA1_c26340	0.39	-0.6
2,743,419	-		PGA1_c26340	0.40	-1.4
2,743,424	+		PGA1_c26340	0.40	+3.0
2,743,536	-		PGA1_c26340	0.49	+0.4
2,743,578	-		PGA1_c26340	0.52	+0.9
2,743,578	-		PGA1_c26340	0.52	-0.3
2,743,599	+		PGA1_c26340	0.54	+2.2
2,743,651	+		PGA1_c26340	0.58	-2.3
2,743,651	+		PGA1_c26340	0.58	+1.7
2,743,651	+		PGA1_c26340	0.58	+2.4
2,743,659	-		PGA1_c26340	0.59	+1.5
2,743,659	-		PGA1_c26340	0.59	-2.3
2,743,719	-		PGA1_c26340	0.64	+1.0
2,743,721	+		PGA1_c26340	0.64	+3.5
2,743,729	-		PGA1_c26340	0.65	+0.7
2,743,765	+		PGA1_c26340	0.67	+1.1
2,743,789	+		PGA1_c26340	0.69	-0.6
2,743,797	-		PGA1_c26340	0.70	+1.7