Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c22040

Experiment: m.b. Polymyxin B sulfate 0.0032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Polymyxin B sulfate 0.0032 mg/ml
2,283,542	+				+2.3
2,283,542	+				+0.1
2,283,550	+				+3.0
2,283,580	+				-2.2
2,283,580	+				-3.1
2,283,588	-				+0.3
2,283,619	+				+0.7
2,283,622	-				+2.6
2,283,658	+		PGA1_c22030	0.12	+0.8
2,283,675	+		PGA1_c22030	0.13	+2.1
2,283,705	+		PGA1_c22030	0.17	+2.0
2,283,813	+		PGA1_c22030	0.28	+2.3
2,283,893	+		PGA1_c22030	0.37	-2.6
2,283,901	-		PGA1_c22030	0.38	-2.1
2,283,901	-		PGA1_c22030	0.38	-0.6
2,283,956	+		PGA1_c22030	0.44	-1.3
2,283,956	+		PGA1_c22030	0.44	-2.9
2,284,106	-		PGA1_c22030	0.60	-0.9
2,284,149	+		PGA1_c22030	0.65	-2.3
2,284,181	+		PGA1_c22030	0.69	-0.7
2,284,210	-		PGA1_c22030	0.72	+2.6
2,284,226	+		PGA1_c22030	0.73	+1.1
2,284,284	+		PGA1_c22030	0.80	+0.4
2,284,352	+		PGA1_c22030	0.87	+1.9
2,284,406	-				-2.8
2,284,447	-				+1.3
2,284,460	-				-0.0
2,284,460	-				-1.2
2,284,464	+				-0.1
2,284,472	-				-1.2
2,284,509	+				+2.4
2,284,512	-				+2.0
2,284,525	-				+2.5
2,284,553	+				-2.5
2,284,637	-		PGA1_c22040	0.12	+1.2
2,284,644	+		PGA1_c22040	0.13	-1.1
2,284,726	-		PGA1_c22040	0.20	-2.8
2,284,727	-		PGA1_c22040	0.20	+2.5
2,284,759	+		PGA1_c22040	0.22	+2.0
2,284,781	-		PGA1_c22040	0.24	-1.6
2,284,914	+		PGA1_c22040	0.35	-0.5
2,284,943	+		PGA1_c22040	0.38	+0.8
2,284,967	-		PGA1_c22040	0.40	+3.4
2,284,967	-		PGA1_c22040	0.40	+0.9
2,284,981	+		PGA1_c22040	0.41	-1.7
2,285,036	-		PGA1_c22040	0.45	-0.9
2,285,041	+		PGA1_c22040	0.46	+2.2
2,285,132	-		PGA1_c22040	0.53	+0.4
2,285,163	-		PGA1_c22040	0.56	-1.7
2,285,163	-		PGA1_c22040	0.56	-1.0
2,285,282	+		PGA1_c22040	0.66	-2.3
2,285,282	+		PGA1_c22040	0.66	-1.9
2,285,287	+		PGA1_c22040	0.66	+0.0
2,285,290	-		PGA1_c22040	0.67	+1.9
2,285,290	-		PGA1_c22040	0.67	+1.0
2,285,290	-		PGA1_c22040	0.67	+3.0
2,285,290	-		PGA1_c22040	0.67	-0.6
2,285,292	+		PGA1_c22040	0.67	-1.7
2,285,292	+		PGA1_c22040	0.67	-1.2
2,285,300	-		PGA1_c22040	0.68	-1.4
2,285,300	-		PGA1_c22040	0.68	+3.2
2,285,300	-		PGA1_c22040	0.68	-0.8
2,285,300	-		PGA1_c22040	0.68	+2.3
2,285,331	+		PGA1_c22040	0.70	-2.3
2,285,331	+		PGA1_c22040	0.70	-0.9
2,285,417	+		PGA1_c22040	0.77	+1.9
2,285,509	-		PGA1_c22040	0.85	+1.9
2,285,511	+		PGA1_c22040	0.85	-2.4
2,285,519	-		PGA1_c22040	0.86	-1.5
2,285,526	+		PGA1_c22040	0.86	+2.4
2,285,556	+		PGA1_c22040	0.89	-0.6
2,285,556	+		PGA1_c22040	0.89	+0.9
2,285,621	-				-2.4
2,285,626	+				-3.1
2,285,631	+				+2.0
2,285,679	-				-1.9
2,285,725	+				-1.4
2,285,764	-				-2.0
2,285,764	-				-1.8
2,285,771	+				-1.8
2,285,779	-				+1.2
2,285,788	+				-1.6
2,285,846	+				+1.0
2,285,945	-		PGA1_c22050	0.19	+0.4
2,285,958	+		PGA1_c22050	0.21	+1.7
2,286,030	+		PGA1_c22050	0.29	+2.4
2,286,037	+		PGA1_c22050	0.30	-2.4
2,286,045	-		PGA1_c22050	0.31	+2.1
2,286,153	+		PGA1_c22050	0.43	+0.8
2,286,161	-		PGA1_c22050	0.44	+2.6
2,286,174	+		PGA1_c22050	0.45	+2.0
2,286,252	-		PGA1_c22050	0.54	-1.9
2,286,388	+		PGA1_c22050	0.69	-2.0
2,286,406	-		PGA1_c22050	0.71	+0.6
2,286,433	+		PGA1_c22050	0.74	-0.6
2,286,458	+		PGA1_c22050	0.77	+1.5
2,286,460	+		PGA1_c22050	0.77	+1.9
2,286,460	+		PGA1_c22050	0.77	+0.1
2,286,460	+		PGA1_c22050	0.77	+1.2
2,286,460	+		PGA1_c22050	0.77	+1.7
2,286,460	+		PGA1_c22050	0.77	+2.1
2,286,468	-		PGA1_c22050	0.78	+0.4
2,286,468	-		PGA1_c22050	0.78	-2.2
2,286,468	-		PGA1_c22050	0.78	+0.6
2,286,468	-		PGA1_c22050	0.78	+1.7
2,286,468	-		PGA1_c22050	0.78	+1.0
2,286,568	-		PGA1_c22050	0.90	+2.2
2,286,571	+				+0.6
2,286,574	-				-1.9