Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c18720

Experiment: m.b. Polymyxin B sulfate 0.0032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Polymyxin B sulfate 0.0032 mg/ml
1,940,975	-		PGA1_c18700	0.78	+0.8
1,940,983	-		PGA1_c18700	0.79	-2.1
1,940,983	-		PGA1_c18700	0.79	+0.9
1,940,983	-		PGA1_c18700	0.79	+1.3
1,940,983	-		PGA1_c18700	0.79	+1.7
1,941,065	-		PGA1_c18700	0.84	-0.6
1,941,081	-		PGA1_c18700	0.85	+1.6
1,941,109	+		PGA1_c18700	0.86	+3.1
1,941,117	-		PGA1_c18700	0.87	+0.8
1,941,117	-		PGA1_c18700	0.87	-1.8
1,941,130	+		PGA1_c18700	0.87	-1.3
1,941,130	+		PGA1_c18700	0.87	+0.5
1,941,135	+		PGA1_c18700	0.88	-1.5
1,941,165	-		PGA1_c18700	0.90	-2.5
1,941,169	+		PGA1_c18700	0.90	-2.0
1,941,169	+		PGA1_c18700	0.90	-1.5
1,941,169	+		PGA1_c18700	0.90	-0.9
1,941,177	-				-2.1
1,941,177	-				-2.7
1,941,177	-				+1.0
1,941,177	-				-0.3
1,941,177	-				-1.9
1,941,177	-				+1.4
1,941,239	-				-1.4
1,941,245	-				-1.8
1,941,269	-				-2.8
1,941,300	+				-1.2
1,941,300	+				-3.2
1,941,300	+				+2.9
1,941,300	+				-1.7
1,941,308	-				-2.4
1,941,308	-				+1.8
1,941,308	-				-1.6
1,941,313	+				+2.1
1,941,313	+				+2.3
1,941,313	+				+1.4
1,941,313	+				-0.8
1,941,313	+				+1.5
1,941,321	-				-0.4
1,941,350	-				-0.5
1,941,867	+				+2.2
1,941,867	+				-2.5
1,941,874	+				-2.8
1,941,923	+				+3.4
1,941,948	+				-1.6
1,943,437	+				+2.2
1,943,438	+				+2.0
1,943,445	-				-3.0
1,943,445	-				+3.6
1,943,445	-				+0.4
1,943,446	-				-2.1
1,943,463	-				+1.1
1,943,475	-				-1.6
1,943,493	+				+3.3
1,943,497	-				+2.1
1,943,506	+				-0.0
1,943,511	+				+1.3
1,943,545	+				-2.3
1,943,568	+				-2.3
1,943,591	-				-0.8
1,943,598	+				+2.9
1,943,618	+				-0.1
1,943,619	+				-0.4
1,943,619	+				+3.4
1,943,619	+				+0.5
1,943,619	+				-1.9
1,943,619	+				+2.4
1,943,619	+				-1.5
1,943,619	+				+3.4
1,943,624	+				+1.7
1,943,626	-				+1.5
1,943,627	-				-0.1
1,943,627	-				-0.2
1,943,627	-				+0.8
1,943,627	-				-1.9
1,943,627	-				+2.1
1,943,627	-				-1.7
1,943,627	-				-2.5
1,943,627	-				+1.7
1,943,627	-				+1.5
1,943,632	-				-1.5
1,943,633	-				-2.1
1,943,655	+				-1.3
1,943,655	+				+1.1
1,943,655	+				+0.2
1,943,655	+				+1.5
1,943,655	+				+3.0
1,943,655	+				+1.2
1,943,655	+				-3.4
1,943,655	+				+1.2
1,943,663	-				+2.1
1,943,663	-				-0.1
1,943,663	-				+0.8
1,943,663	-				-2.6
1,943,681	+				+2.0
1,943,689	-				+0.9
1,943,689	-				-1.3
1,943,700	+				+2.0
1,943,700	+				+2.8
1,943,700	+				-1.3
1,943,700	+				-1.1
1,943,708	-				+1.0
1,943,708	-				+2.4
1,943,708	-				-2.6
1,943,710	+				+1.9
1,943,710	+				-1.9
1,943,710	+				-0.0
1,943,718	-				+1.7
1,943,718	-				-0.9
1,943,718	-				-2.7
1,943,718	-				-2.5
1,943,718	-				+1.5
1,943,718	-				+2.6
1,943,718	-				-2.4
1,943,744	+				+1.3
1,943,797	-				+0.1
1,943,833	+				-2.1
1,943,833	+				-1.6
1,943,833	+				-1.7
1,943,836	+				+3.0
1,943,836	+				+4.3
1,943,836	-				-2.5
1,943,841	-				+2.0
1,943,842	+				+2.6
1,943,887	+				+0.5
1,943,887	+				-2.5
1,943,887	+				-0.8
1,943,887	+				+1.4
1,943,887	+				+0.3
1,943,887	+				+2.2
1,943,890	+				+1.3
1,943,890	+				-0.5
1,943,895	-				-2.8
1,943,895	-				-0.9
1,943,895	-				-1.6
1,943,895	-				+2.6
1,943,895	-				-0.2
1,943,898	-				+0.5
1,943,898	-				+1.4
1,943,898	-				-0.8
1,943,898	-				+1.2
1,943,898	-				-0.3
1,943,898	-				+2.3
1,943,898	-				-1.2
1,943,899	+				-1.5
1,943,900	+				+1.8
1,943,900	+				-0.9
1,943,900	+				-1.9
1,943,900	+				+2.3
1,943,900	+				+1.4
1,943,900	+				+0.4
1,943,900	+				-1.3
1,943,900	+				+2.6
1,943,900	+				+1.0
1,943,906	+				-2.0
1,943,908	-				+2.5
1,943,908	-				+0.6
1,943,908	-				-1.5
1,943,908	-				+1.8
1,943,908	-				-0.4
1,943,908	-				+1.0
1,943,908	-				+2.7
1,943,908	-				+0.6
1,943,910	+				+1.1
1,943,914	-				-2.2
1,943,915	+				+1.5
1,943,923	-				-2.1
1,943,923	-				-2.2
1,943,923	-				-2.7
1,943,925	+				-1.0
1,943,925	+				-1.8
1,943,925	+				-1.4
1,943,925	+				+2.1
1,943,925	+				+1.9
1,943,925	+				-3.2
1,943,925	+				-1.8
1,943,925	+				+2.1
1,943,925	+				-2.1
1,943,925	+				+1.7
1,943,933	-				+0.8
1,943,933	-				-1.2
1,943,933	-				-1.1
1,943,933	-				-0.1
1,943,933	-				+2.7
1,943,965	-				-2.0
1,943,978	-				-1.9
1,943,978	-				-2.0
1,943,978	-				-3.2
1,944,022	-		PGA1_c18730	0.11	-1.5
1,944,044	+		PGA1_c18730	0.13	-0.4
1,944,044	+		PGA1_c18730	0.13	-0.5
1,944,052	-		PGA1_c18730	0.14	-1.4
1,944,080	+		PGA1_c18730	0.17	+0.3
1,944,081	+		PGA1_c18730	0.17	+1.7
1,944,088	-		PGA1_c18730	0.18	-1.5
1,944,088	-		PGA1_c18730	0.18	+1.1
1,944,090	+		PGA1_c18730	0.18	+2.7
1,944,095	+		PGA1_c18730	0.18	+2.0
1,944,113	+		PGA1_c18730	0.20	+2.4
1,944,118	+		PGA1_c18730	0.20	+2.2
1,944,121	-		PGA1_c18730	0.21	+0.1
1,944,126	-		PGA1_c18730	0.21	+2.5
1,944,131	-		PGA1_c18730	0.22	+0.7
1,944,165	-		PGA1_c18730	0.25	+2.1
1,944,197	+		PGA1_c18730	0.28	-2.7
1,944,205	-		PGA1_c18730	0.29	-1.9
1,944,205	-		PGA1_c18730	0.29	-0.2
1,944,265	+		PGA1_c18730	0.35	+2.5
1,944,266	+		PGA1_c18730	0.35	+2.0
1,944,266	-		PGA1_c18730	0.35	+1.1
1,944,295	+		PGA1_c18730	0.38	-0.8
1,944,302	+		PGA1_c18730	0.38	-0.6
1,944,302	+		PGA1_c18730	0.38	+0.6
1,944,365	-		PGA1_c18730	0.45	+1.4
1,944,373	-		PGA1_c18730	0.45	+1.5